RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	HTR1A	P08908	422 aa		4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664	NFYA	P23511	347 aa	Predicted RBP	4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664	FOXA1	P55317	472 aa		4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664	MSRB3	Q8IXL7	192 aa		4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664	MRPL32	Q9BYC8	188 aa	Known RBP	4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664	SMIM3	Q9BZL3	60 aa		4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664	TP53TG3	Q9ULZ0	132 aa		4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664		F8W036	122 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664		J3QQQ9	107 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	DLEU1	O43261	78 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	TCL1B	O95988	128 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	DYNLT3	P51808	116 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	FAM229B	Q4G0N7	80 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	SPINT4	Q6UDR6	99 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	ADAT1	Q9BUB4	502 aa	Known RBP	4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	SCRT1	Q9BWW7	348 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	NAT8	Q9UHE5	227 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	EPDR1	Q9UM22	224 aa		4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	RBM7	Q9Y580	266 aa	Known RBP	4.16	□□□□□ -1.74
LRCH3-215	ENST00000476664	IGKV3D-20	A0A0C4DH25	116 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	IGHV1-58	A0A0C4DH39	117 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	TRBV7-6	A0A0J9YX20	115 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	FABP2	P12104	132 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	RPL22	P35268	128 aa	Known RBP	4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	RHOG	P84095	191 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	KISS1	Q15726	138 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	MSMO1	Q15800	293 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	DYNAP	Q8N1N2	210 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	AP1S3	Q96PC3	154 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	IMMP2L	Q96T52	175 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664	SMAD5-AS1	Q9Y6J3	95 aa		4.15	□□□□□ -1.75
LRCH3-215	ENST00000476664		A0A1B0GU33	70 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664		A0A1B0GW64	132 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	ODAM	A1E959	279 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	GGTLC3	B5MD39	225 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664		H3BT86	120 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664		J3QR89	54 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	NAPSA	O96009	420 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	IGKV1-16	P04430	117 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	PRB4	P10163	310 aa	Predicted RBP	4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	RNASE4	P34096	147 aa	Known RBP	4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	TMBIM6	P55061	237 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	MYL5	Q02045	173 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	LCE3B	Q5TA77	95 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	PHF5A	Q7RTV0	110 aa	Known RBP	4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664		Q8NAQ8	132 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	SLC30A7	Q8NEW0	376 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	OR51A4	Q8NGJ6	313 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	OR4K15	Q8NH41	348 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	TMEM203	Q969S6	136 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	MAGOHB	Q96A72	148 aa	Known RBP	4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	PRADC1	Q9BSG0	188 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	ZNF471	Q9BX82	626 aa	Predicted RBP	4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	RNF11	Q9Y3C5	154 aa		4.14	□□□□□ -1.75
LRCH3-215	ENST00000476664	LRP1B	Q9NZR2	4599 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	MEIKIN	A0A087WXM9	373 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	LOC107984640	A0A0U1RRK4	108 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	S100P	P25815	95 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	RPL35	P42766	123 aa	Known RBP	4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	RPL28	P46779	137 aa	Known RBP	4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	EIF2B2	P49770	351 aa	Known RBP	4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	AQP4	P55087	323 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	RRAS2	P62070	204 aa	Predicted RBP	4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	NCS1	P62166	190 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	SELENOW	P63302	87 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	HBB	P68871	147 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	CCL8	P80075	99 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	C4orf22	Q6V702	233 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	LINC00305	Q7Z4B0	112 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	PFN4	Q8NHR9	129 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	PRR34	Q9NV39	138 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664	TIMM9	Q9Y5J7	89 aa		4.13	□□□□□ -1.75
LRCH3-215	ENST00000476664		A0A0D9SG52	128 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	CXCL1	P09341	107 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	ZNF728	P0DKX0	622 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	EIF5AL1	Q6IS14	154 aa	Known RBP	4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	DPPA3	Q6W0C5	159 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664		Q8N9L7	120 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	TMEM106A	Q96A25	262 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	NPCDR1	Q9BY65	106 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	OR5AC2	Q9NZP5	309 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	ERG28	Q9UKR5	140 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	TANC2	Q9HCD6	1990 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	FAT4	Q6V0I7	4981 aa		4.12	□□□□□ -1.75
LRCH3-215	ENST00000476664	VPS13B	Q7Z7G8	4022 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	C7orf71	A4D174	169 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	NDUFB3	O43676	98 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	HIST1H2BK	O60814	126 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	HIST1H2BJ	P06899	126 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	DNAH10OS	P0CZ25	163 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	KDELR1	P24390	212 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	DYNLT1	P63172	113 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664		Q5XG85	94 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	C1orf64	Q8NEQ6	169 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	OR8B2	Q96RD0	313 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	DUSP21	Q9H596	190 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	SORL1	Q92673	2214 aa		4.11	□□□□□ -1.75
LRCH3-215	ENST00000476664	IFNA4	P05014	189 aa		4.1	□□□□□ -1.75
LRCH3-215	ENST00000476664	KHDC3L	Q587J8	217 aa		4.1	□□□□□ -1.75
LRCH3-215	ENST00000476664	LYZL1	Q6UWQ5	148 aa		4.1	□□□□□ -1.75

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