RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 PRM2P04554 102 aa8.25□□□□□ -1.09
CHD3-208ENST00000470531 SUMO2P61956 95 aaKnown RBP8.25□□□□□ -1.09
CHD3-208ENST00000470531 KAAG1Q9UBP8 84 aa8.25□□□□□ -1.09
CHD3-208ENST00000470531 IGLV11-55A0A075B6I3 123 aa8.25□□□□□ -1.09
CHD3-208ENST00000470531 TRAV21A0A0B4J279 112 aa8.25□□□□□ -1.09
CHD3-208ENST00000470531 NPFFO15130 113 aa8.25□□□□□ -1.09
CHD3-208ENST00000470531 ZNF876PQ49A33 203 aa8.25□□□□□ -1.09
CHD3-208ENST00000470531 ITLN2Q8WWU7 325 aaPredicted RBP8.25□□□□□ -1.09
CHD3-208ENST00000470531 SPATA25Q9BR10 227 aa8.25□□□□□ -1.09
CHD3-208ENST00000470531 SLC50A1Q9BRV3 221 aa8.25□□□□□ -1.09
CHD3-208ENST00000470531 DUSP14O95147 198 aaKnown RBP8.24□□□□□ -1.09
CHD3-208ENST00000470531 GNLYP22749 145 aa8.24□□□□□ -1.09
CHD3-208ENST00000470531 ANKRD17O75179 2603 aaKnown RBP8.24□□□□□ -1.09
CHD3-208ENST00000470531 SYNJ2BPP57105 145 aa8.24□□□□□ -1.09
CHD3-208ENST00000470531 PDE6HQ13956 83 aa8.24□□□□□ -1.09
CHD3-208ENST00000470531 BUB3O43684 328 aa8.24□□□□□ -1.09
CHD3-208ENST00000470531 XGP55808 180 aa8.24□□□□□ -1.09
CHD3-208ENST00000470531 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
CHD3-208ENST00000470531 C11orf21Q9P2W6 132 aa8.24□□□□□ -1.09
CHD3-208ENST00000470531 H7C1H1 209 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 C9orf153Q5TBE3 101 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 SMAD5-AS1Q9Y6J3 95 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 KLRB1Q12918 225 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 Q8N9W7 124 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 CELSR1Q9NYQ6 3014 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 TRAV25A0A0B4J276 109 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 F5H768 121 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 DEFB136Q30KP8 78 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 CEND1Q8N111 149 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 EDA2RQ9HAV5 297 aa8.23□□□□□ -1.09
CHD3-208ENST00000470531 CHD6Q8TD26 2715 aa8.22□□□□□ -1.09
CHD3-208ENST00000470531 TOMM7Q9P0U1 55 aa8.22□□□□□ -1.09
CHD3-208ENST00000470531 Q8N8P6 123 aa8.22□□□□□ -1.09
CHD3-208ENST00000470531 C9JAW5 83 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 RNASE1P07998 156 aaKnown RBP8.21□□□□□ -1.09
CHD3-208ENST00000470531 UBE2E2Q96LR5 201 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 CCL19Q99731 98 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 SMIM2Q9BVW6 85 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.09
CHD3-208ENST00000470531 FLNCQ14315 2725 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 CRYBG3Q68DQ2 2970 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 SMIM9A6NGZ8 99 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 TMEM262E9PQX1 116 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 IGHV4-38-2P0DP08 117 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 EDN2P20800 178 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 TCF15Q12870 199 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 DPH3P1Q9H4G8 78 aa8.21□□□□□ -1.09
CHD3-208ENST00000470531 ORMDL2Q53FV1 153 aa8.21□□□□□ -1.1
CHD3-208ENST00000470531 SDHAF1A6NFY7 115 aa8.2□□□□□ -1.1
CHD3-208ENST00000470531 FOXI1Q12951 378 aa8.2□□□□□ -1.1
CHD3-208ENST00000470531 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
CHD3-208ENST00000470531 C10orf99Q6UWK7 81 aa8.2□□□□□ -1.1
CHD3-208ENST00000470531 ZFP2Q6ZN57 461 aa8.2□□□□□ -1.1
CHD3-208ENST00000470531 NDUFV3P56181 108 aaKnown RBP8.2□□□□□ -1.1
CHD3-208ENST00000470531 DAND5Q8N907 189 aa8.2□□□□□ -1.1
CHD3-208ENST00000470531 DYNLRB2Q8TF09 96 aa8.2□□□□□ -1.1
CHD3-208ENST00000470531 MRGPRG-AS1Q2M3A8 158 aa8.2□□□□□ -1.1
CHD3-208ENST00000470531 DCHS2Q6V1P9 2916 aa8.2□□□□□ -1.1
CHD3-208ENST00000470531 WI2-2373I1.2A0A1W2PRP0 233 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 IGLL5B9A064 214 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 F8VRH5 84 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 C11orf68Q9H3H3 251 aaKnown RBP8.19□□□□□ -1.1
CHD3-208ENST00000470531 LINC00574Q9H8X3 128 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 PKIGQ9Y2B9 76 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 MSRB2Q9Y3D2 182 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 LOC107984640A0A0U1RRK4 108 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 MYMXA0A1B0GTQ4 84 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 K7ENP7 123 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 CD28P10747 220 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 SNRPD3P62318 126 aaKnown RBP8.19□□□□□ -1.1
CHD3-208ENST00000470531 RNF5Q99942 180 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 PRR9Q5T870 116 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 Q6ZS46 218 aa8.19□□□□□ -1.1
CHD3-208ENST00000470531 A8MWV9 139 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 M0R1W7 72 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 RS1O15537 224 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 CRYGBP07316 175 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 PLNP26678 52 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 CCDC140Q96MF4 163 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 MOB4Q9Y3A3 225 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 CFHR3Q02985 330 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 FAM110DQ8TAY7 271 aaPredicted RBP8.18□□□□□ -1.1
CHD3-208ENST00000470531 PLEKHB2Q96CS7 222 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 LINC01587Q99440 93 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 ADORA2A-AS1P86434 159 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 PPDPFLQ8WWR9 84 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 RNF185Q96GF1 192 aa8.18□□□□□ -1.1
CHD3-208ENST00000470531 P0DMU3 169 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 FAM231AP0DMU4 169 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 FAM231CP0DMU5 169 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 ZANQ9Y493 2812 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 A0A087WX48 190 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 IGHV4-61A0A0C4DH41 118 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 FOXI2Q6ZQN5 318 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 UBE2E1P51965 193 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 OR11H6Q8NGC7 330 aa8.17□□□□□ -1.1
CHD3-208ENST00000470531 TRAV13-1A0A0B4J241 112 aa8.16□□□□□ -1.1
CHD3-208ENST00000470531 CENPVL3A0A0U1RRI6 287 aa8.16□□□□□ -1.1
CHD3-208ENST00000470531 RBAKDNA6NC62 111 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms