RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 GRIFINA4D1Z8 144 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 SMIM9A6NGZ8 99 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 C1orf196B1AJZ1 125 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 H3BVH4 76 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 K7EIL1 84 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 ARMS2P0C7Q2 107 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 TRGC1P0CF51 173 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 GZMBP10144 247 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 RAB4BP61018 213 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 SPANXN1Q5VSR9 72 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 MRPL54Q6P161 138 aaKnown RBP4.82□□□□□ -1.64
VAMP3-202ENST00000470357 ZFP82Q8N141 532 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 PTH2Q96A98 100 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 NDUFAF3Q9BU61 184 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 WFDC10AQ9H1F0 79 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 STARD9Q9P2P6 4700 aa4.82□□□□□ -1.64
VAMP3-202ENST00000470357 IGHV3-16A0A0C4DH30 117 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 A0A1B0GXF2 115 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 SNURFLB1AK76 121 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 GNRH2O43555 120 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 IGHV4-30-4P0DP06 118 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 NTF3P20783 257 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 CAMPP49913 170 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 TWIST1Q15672 202 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 RRN3P1Q2M238 152 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 Q6ZWC4 215 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 GATD1Q8NB37 220 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 TMEM263Q8WUH6 116 aaKnown RBP4.81□□□□□ -1.64
VAMP3-202ENST00000470357 FRZBQ92765 325 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 C16orf74Q96GX8 76 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 C9orf85Q96MD7 179 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 AP1S3Q96PC3 154 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 C1orf43Q9BWL3 253 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 SCRT2Q9NQ03 307 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 TRAPPC1Q9Y5R8 145 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 MUC4Q99102 2169 aa4.81□□□□□ -1.64
VAMP3-202ENST00000470357 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 PRSS29PA6NIE9 313 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 M0R2P5 195 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 SPINK4O60575 86 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 NXPH4O95158 308 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 APCSP02743 223 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 GIG44P09565 113 aaPredicted RBP4.8□□□□□ -1.64
VAMP3-202ENST00000470357 RBMY1A1P0DJD3 496 aaKnown RBP4.8□□□□□ -1.64
VAMP3-202ENST00000470357 RBMY1CP0DJD4 496 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 SMIM17P0DL12 118 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 RNASE3P12724 160 aaKnown RBP4.8□□□□□ -1.64
VAMP3-202ENST00000470357 HTN1P15515 57 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 KRTAP10-11P60412 298 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 RAB5BP61020 215 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 PLECQ15149 4684 aaKnown RBP4.8□□□□□ -1.64
VAMP3-202ENST00000470357 RBMY1FQ15415 496 aaKnown RBP4.8□□□□□ -1.64
VAMP3-202ENST00000470357 ZNF705AQ6ZN79 300 aaPredicted RBP4.8□□□□□ -1.64
VAMP3-202ENST00000470357 TMEM136Q6ZRR5 245 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 C1orf158Q8N1D5 194 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 CSNK1G2-AS1Q8NCQ2 148 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 OR10AG1Q8NH19 301 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 TMEM191AQ9H0A3 160 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 TP53TG1Q9Y2A0 90 aa4.8□□□□□ -1.64
VAMP3-202ENST00000470357 HERC2O95714 4834 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 A8MWV9 139 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 M0R381 172 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 CIDEAO60543 219 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 PPBPP02775 128 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 FABP9Q0Z7S8 132 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 LGALS9BQ3B8N2 356 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 ZNF876PQ49A33 203 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 Q6ZQT7 251 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 RNASE8Q8TDE3 154 aaKnown RBP4.79□□□□□ -1.64
VAMP3-202ENST00000470357 RCHY1Q96PM5 261 aa4.79□□□□□ -1.64
VAMP3-202ENST00000470357 TIMM8BQ9Y5J9 83 aaPredicted RBP4.79□□□□□ -1.64
VAMP3-202ENST00000470357 TEX48A0A1B0GUV7 120 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 RHODO00212 210 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 PPP1R17O96001 155 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 TRGC2P03986 189 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 MIFP14174 115 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 FOXI1Q12951 378 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 DAZ2Q13117 558 aaKnown RBP4.78□□□□□ -1.64
VAMP3-202ENST00000470357 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 FAM104BQ5XKR9 115 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 C11orf72Q8NBR9 251 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 LINC00476Q8WZB0 136 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 RNF183Q96D59 192 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 DPH3P1Q9H4G8 78 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 GSN-AS1Q9NRJ2 163 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 MDFICQ9P1T7 246 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 LAMTOR2Q9Y2Q5 125 aa4.78□□□□□ -1.64
VAMP3-202ENST00000470357 MUC21A0A0G2JKD1 596 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 MUC21A0A140T8X8 626 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 SPRY2O43597 315 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 FRMD6-AS1P0C7T7 363 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 DEFB135Q30KP9 77 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 ORMDL3Q8N138 153 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 OR11H2Q8NH07 326 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 RASL10AQ92737 203 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 MRAP2Q96G30 205 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 B9D2Q9BPU9 175 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 OVOL2Q9BRP0 275 aa4.77□□□□□ -1.65
VAMP3-202ENST00000470357 NACAE9PAV3 2078 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms