RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RNASEKQ6P5S7 137 aaKnown RBP10.46□□□□□ -0.73
COL27A1-203ENST00000468565 SLC50A1Q9BRV3 221 aa10.46□□□□□ -0.73
COL27A1-203ENST00000468565 IGHV4-28A0A0C4DH34 117 aa10.46□□□□□ -0.74
COL27A1-203ENST00000468565 TMEM189A5PLL7 270 aa10.46□□□□□ -0.74
COL27A1-203ENST00000468565 DEFB1P60022 68 aa10.46□□□□□ -0.74
COL27A1-203ENST00000468565 EBLN2Q6P2I7 272 aa10.46□□□□□ -0.74
COL27A1-203ENST00000468565 PHLDA1Q8WV24 401 aaPredicted RBP10.46□□□□□ -0.74
COL27A1-203ENST00000468565 NDFIP1Q9BT67 221 aa10.46□□□□□ -0.74
COL27A1-203ENST00000468565 XCL2Q9UBD3 114 aa10.46□□□□□ -0.74
COL27A1-203ENST00000468565 A0A0J9YX75 114 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 DEFB4AO15263 64 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 SH2D1AO60880 128 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 NANOS2P60321 138 aaKnown RBP10.45□□□□□ -0.74
COL27A1-203ENST00000468565 NIT1Q86X76 327 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 GATD1Q8NB37 220 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 C20orf173Q96LM9 149 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 M0R2Z0 102 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 RBMY1A1P0DJD3 496 aaKnown RBP10.45□□□□□ -0.74
COL27A1-203ENST00000468565 RBMY1CP0DJD4 496 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 PRB4P10163 310 aaPredicted RBP10.45□□□□□ -0.74
COL27A1-203ENST00000468565 RBMY1FQ15415 496 aaKnown RBP10.45□□□□□ -0.74
COL27A1-203ENST00000468565 VAMP8Q9BV40 100 aa10.45□□□□□ -0.74
COL27A1-203ENST00000468565 HYDINQ4G0P3 5121 aa10.44□□□□□ -0.74
COL27A1-203ENST00000468565 A8MTW9 85 aa10.44□□□□□ -0.74
COL27A1-203ENST00000468565 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
COL27A1-203ENST00000468565 PTTG1IPP53801 180 aa10.44□□□□□ -0.74
COL27A1-203ENST00000468565 CHCHD1Q96BP2 118 aaKnown RBP10.44□□□□□ -0.74
COL27A1-203ENST00000468565 TRAV8-2A0A0B4J237 113 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 RBAKDNA6NC62 111 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 F6UB75 175 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 IGKV3-20P01619 116 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 VGLL1Q99990 258 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 C3orf79P0CE67 100 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 IGFL4Q6B9Z1 124 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 LINC00476Q8WZB0 136 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 MRPL53Q96EL3 112 aaKnown RBP10.43□□□□□ -0.74
COL27A1-203ENST00000468565 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
COL27A1-203ENST00000468565 GHRHP01286 108 aa10.42□□□□□ -0.74
COL27A1-203ENST00000468565 Q8N976 141 aa10.42□□□□□ -0.74
COL27A1-203ENST00000468565 Q8TAT8 98 aa10.42□□□□□ -0.74
COL27A1-203ENST00000468565 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
COL27A1-203ENST00000468565 DUSP14O95147 198 aaKnown RBP10.41□□□□□ -0.74
COL27A1-203ENST00000468565 FXYD7P58549 80 aa10.41□□□□□ -0.74
COL27A1-203ENST00000468565 UBE2V1Q13404 147 aa10.41□□□□□ -0.74
COL27A1-203ENST00000468565 TMSB15BA0A087X1C1 80 aa10.41□□□□□ -0.74
COL27A1-203ENST00000468565 LYZL1Q6UWQ5 148 aa10.41□□□□□ -0.74
COL27A1-203ENST00000468565 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
COL27A1-203ENST00000468565 RNASE8Q8TDE3 154 aaKnown RBP10.41□□□□□ -0.74
COL27A1-203ENST00000468565 PAM16Q9Y3D7 125 aa10.41□□□□□ -0.74
COL27A1-203ENST00000468565 AMTNQ6UX39 209 aa10.4□□□□□ -0.74
COL27A1-203ENST00000468565 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
COL27A1-203ENST00000468565 ZNF738Q8NE65 137 aa10.4□□□□□ -0.74
COL27A1-203ENST00000468565 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
COL27A1-203ENST00000468565 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
COL27A1-203ENST00000468565 TCTAP57738 103 aa10.39□□□□□ -0.75
COL27A1-203ENST00000468565 PMCHL1Q16048 86 aa10.39□□□□□ -0.75
COL27A1-203ENST00000468565 CTRLP40313 264 aa10.39□□□□□ -0.75
COL27A1-203ENST00000468565 ERCC8Q13216 396 aa10.39□□□□□ -0.75
COL27A1-203ENST00000468565 TDRG1Q3Y452 100 aa10.39□□□□□ -0.75
COL27A1-203ENST00000468565 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
COL27A1-203ENST00000468565 PRAC2D3DTV9 90 aa10.38□□□□□ -0.75
COL27A1-203ENST00000468565 OR5AL1P0C617 328 aa10.38□□□□□ -0.75
COL27A1-203ENST00000468565 ZNF80P51504 273 aaPredicted RBP10.38□□□□□ -0.75
COL27A1-203ENST00000468565 PET117Q6UWS5 81 aa10.38□□□□□ -0.75
COL27A1-203ENST00000468565 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
COL27A1-203ENST00000468565 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 LY6G6CO95867 125 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 ORM1P02763 201 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 TMEM78Q5T7P6 136 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 OR8A1Q8NGG7 326 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 UQCR10Q9UDW1 63 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 CELA1Q9UNI1 258 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 IGHV3OR16-12A0A075B7B8 117 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 ZNF138P52744 262 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 Q6ZTC4 211 aa10.37□□□□□ -0.75
COL27A1-203ENST00000468565 IGLC6P0CF74 106 aa10.36□□□□□ -0.75
COL27A1-203ENST00000468565 HIST1H1AQ02539 215 aaPredicted RBP10.36□□□□□ -0.75
COL27A1-203ENST00000468565 SPATA45Q537H7 98 aa10.36□□□□□ -0.75
COL27A1-203ENST00000468565 TMEM70Q9BUB7 260 aa10.36□□□□□ -0.75
COL27A1-203ENST00000468565 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
COL27A1-203ENST00000468565 TEX48A0A1B0GUV7 120 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 LEPROTL1O95214 131 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 INSP01308 110 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 C12orf74Q32Q52 190 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 FAM104BQ5XKR9 115 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 LGALS9CQ6DKI2 356 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 CCL25O15444 150 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 CRXO43186 299 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-203ENST00000468565 SPINK13Q1W4C9 94 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 FA2HQ7L5A8 372 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 VPS25Q9BRG1 176 aa10.35□□□□□ -0.75
COL27A1-203ENST00000468565 SPART-AS1P0CW21 52 aa10.34□□□□□ -0.75
COL27A1-203ENST00000468565 TWIST1Q15672 202 aa10.34□□□□□ -0.75
COL27A1-203ENST00000468565 BATFQ16520 125 aa10.34□□□□□ -0.75
COL27A1-203ENST00000468565 RRN3P1Q2M238 152 aa10.34□□□□□ -0.75
COL27A1-203ENST00000468565 ORMDL3Q8N138 153 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms