RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 A0A087WWL8 130 aa16.18■□□□□ 0.18
PTCH1-210ENST00000468211 TMSB15BA0A087X1C1 80 aa16.18■□□□□ 0.18
PTCH1-210ENST00000468211 FAM162BQ5T6X4 162 aa16.18■□□□□ 0.18
PTCH1-210ENST00000468211 SYT8Q8NBV8 401 aa16.18■□□□□ 0.18
PTCH1-210ENST00000468211 OR11H4Q8NGC9 324 aa16.18■□□□□ 0.18
PTCH1-210ENST00000468211 TRAV8-3A0A0A6YYJ7 113 aa16.17■□□□□ 0.18
PTCH1-210ENST00000468211 ARPC5O15511 151 aa16.17■□□□□ 0.18
PTCH1-210ENST00000468211 FHITP49789 147 aa16.17■□□□□ 0.18
PTCH1-210ENST00000468211 ZNF674Q2M3X9 581 aa16.17■□□□□ 0.18
PTCH1-210ENST00000468211 SFRP2Q96HF1 295 aa16.17■□□□□ 0.18
PTCH1-210ENST00000468211 FMC1Q96HJ9 113 aa16.17■□□□□ 0.18
PTCH1-210ENST00000468211 A0A087WWC5 75 aa16.16■□□□□ 0.18
PTCH1-210ENST00000468211 RHODO00212 210 aa16.16■□□□□ 0.18
PTCH1-210ENST00000468211 M0R381 172 aa16.15■□□□□ 0.18
PTCH1-210ENST00000468211 LTAP01374 205 aa16.15■□□□□ 0.18
PTCH1-210ENST00000468211 UBE2G1P62253 170 aa16.15■□□□□ 0.18
PTCH1-210ENST00000468211 LINC01559Q495D7 138 aa16.15■□□□□ 0.18
PTCH1-210ENST00000468211 NIT1Q86X76 327 aa16.15■□□□□ 0.18
PTCH1-210ENST00000468211 BAALCQ8WXS3 180 aa16.15■□□□□ 0.18
PTCH1-210ENST00000468211 PHLDA3Q9Y5J5 127 aa16.15■□□□□ 0.18
PTCH1-210ENST00000468211 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.14■□□□□ 0.17
PTCH1-210ENST00000468211 TRBV6-1A0A0K0K1D8 114 aa16.14■□□□□ 0.17
PTCH1-210ENST00000468211 SMLR1H3BR10 107 aa16.14■□□□□ 0.17
PTCH1-210ENST00000468211 C1QBP02746 253 aa16.14■□□□□ 0.17
PTCH1-210ENST00000468211 CST9LP1Q5W188 147 aa16.14■□□□□ 0.17
PTCH1-210ENST00000468211 TPT1P13693 172 aaKnown RBP16.13■□□□□ 0.17
PTCH1-210ENST00000468211 Q6ZSA8 131 aa16.13■□□□□ 0.17
PTCH1-210ENST00000468211 LINC01620Q4KN68 170 aa16.12■□□□□ 0.17
PTCH1-210ENST00000468211 TOR2AQ5JU69 321 aa16.12■□□□□ 0.17
PTCH1-210ENST00000468211 PAGE4O60829 102 aa16.11■□□□□ 0.17
PTCH1-210ENST00000468211 KLK12Q9UKR0 248 aa16.11■□□□□ 0.17
PTCH1-210ENST00000468211 AKR1C3P42330 323 aa16.1■□□□□ 0.17
PTCH1-210ENST00000468211 ZFP82Q8N141 532 aa16.1■□□□□ 0.17
PTCH1-210ENST00000468211 RPL19P84098 196 aaKnown RBP16.09■□□□□ 0.17
PTCH1-210ENST00000468211 STOML3Q8TAV4 291 aa16.09■□□□□ 0.17
PTCH1-210ENST00000468211 TCEAL7Q9BRU2 100 aa16.09■□□□□ 0.17
PTCH1-210ENST00000468211 URGCP-MRPS24S4R325 110 aa16.09■□□□□ 0.17
PTCH1-210ENST00000468211 UBE2D3P61077 147 aa16.08■□□□□ 0.16
PTCH1-210ENST00000468211 UBE2D2P62837 147 aa16.08■□□□□ 0.16
PTCH1-210ENST00000468211 IGKV2D-24A0A075B6R9 120 aa16.07■□□□□ 0.16
PTCH1-210ENST00000468211 A0A1B0GV50 99 aa16.07■□□□□ 0.16
PTCH1-210ENST00000468211 TRBV10-1A0A0K0K1A3 114 aa16.06■□□□□ 0.16
PTCH1-210ENST00000468211 RPL36AP83881 106 aaKnown RBP16.06■□□□□ 0.16
PTCH1-210ENST00000468211 RGS21Q2M5E4 152 aa16.06■□□□□ 0.16
PTCH1-210ENST00000468211 KCNRGQ8N5I3 272 aa16.06■□□□□ 0.16
PTCH1-210ENST00000468211 OR10AG1Q8NH19 301 aa16.06■□□□□ 0.16
PTCH1-210ENST00000468211 SFT2D1Q8WV19 159 aa16.06■□□□□ 0.16
PTCH1-210ENST00000468211 RPL36ALQ969Q0 106 aaKnown RBP16.06■□□□□ 0.16
PTCH1-210ENST00000468211 UBE2WQ96B02 151 aa16.06■□□□□ 0.16
PTCH1-210ENST00000468211 COX11Q9Y6N1 276 aa16.06■□□□□ 0.16
PTCH1-210ENST00000468211 TRBV7-3A0A075B6L6 115 aa16.05■□□□□ 0.16
PTCH1-210ENST00000468211 SCO2A0A1W2PP80 73 aa16.05■□□□□ 0.16
PTCH1-210ENST00000468211 FAM213BQ8TBF2 198 aa16.05■□□□□ 0.16
PTCH1-210ENST00000468211 MBD3L1Q8WWY6 194 aa16.05■□□□□ 0.16
PTCH1-210ENST00000468211 RMI2Q96E14 147 aa16.05■□□□□ 0.16
PTCH1-210ENST00000468211 LINC00528Q8N1L1 170 aa16.04■□□□□ 0.16
PTCH1-210ENST00000468211 MLST8Q9BVC4 326 aa16.04■□□□□ 0.16
PTCH1-210ENST00000468211 A0A087WX48 190 aa16.03■□□□□ 0.16
PTCH1-210ENST00000468211 MUC21A0A0G2JKD1 596 aa16.03■□□□□ 0.16
PTCH1-210ENST00000468211 MUC21A0A140T8X8 626 aa16.03■□□□□ 0.16
PTCH1-210ENST00000468211 OR10G8Q8NGN5 311 aa16.03■□□□□ 0.16
PTCH1-210ENST00000468211 RBFOX3A6NFN3 312 aa16.02■□□□□ 0.16
PTCH1-210ENST00000468211 SEC11BP0C7V7 166 aa16.02■□□□□ 0.16
PTCH1-210ENST00000468211 ZNF345Q14585 488 aa16.02■□□□□ 0.16
PTCH1-210ENST00000468211 ATRAIDQ6UW56 229 aa16.02■□□□□ 0.16
PTCH1-210ENST00000468211 Q8N976 141 aa16.02■□□□□ 0.16
PTCH1-210ENST00000468211 NEXN-AS1Q8NBZ9 246 aa16.02■□□□□ 0.16
PTCH1-210ENST00000468211 CHCHD7Q9BUK0 85 aa16.02■□□□□ 0.16
PTCH1-210ENST00000468211 RAB4BP61018 213 aa16.01■□□□□ 0.15
PTCH1-210ENST00000468211 PRR27Q6MZM9 219 aa16.01■□□□□ 0.15
PTCH1-210ENST00000468211 SCXQ7RTU7 201 aa16.01■□□□□ 0.15
PTCH1-210ENST00000468211 TRBV6-8A0A0A6YYG3 113 aa16■□□□□ 0.15
PTCH1-210ENST00000468211 S100A9P06702 114 aaKnown RBP16■□□□□ 0.15
PTCH1-210ENST00000468211 ZNF56Q15929 161 aa16■□□□□ 0.15
PTCH1-210ENST00000468211 BAGE2Q86Y30 109 aa16■□□□□ 0.15
PTCH1-210ENST00000468211 SSBP4Q9BWG4 385 aaPredicted RBP16■□□□□ 0.15
PTCH1-210ENST00000468211 SNAI2O43623 268 aa15.99■□□□□ 0.15
PTCH1-210ENST00000468211 CXCL1P09341 107 aa15.99■□□□□ 0.15
PTCH1-210ENST00000468211 ELOBQ15370 118 aa15.99■□□□□ 0.15
PTCH1-210ENST00000468211 ENHOQ6UWT2 76 aa15.99■□□□□ 0.15
PTCH1-210ENST00000468211 ZNF471Q9BX82 626 aaPredicted RBP15.99■□□□□ 0.15
PTCH1-210ENST00000468211 UMAD1C9J7I0 102 aa15.98■□□□□ 0.15
PTCH1-210ENST00000468211 TMEM262E9PQX1 116 aa15.98■□□□□ 0.15
PTCH1-210ENST00000468211 PLA2G1BP04054 148 aaKnown RBP15.98■□□□□ 0.15
PTCH1-210ENST00000468211 SSTP61278 116 aa15.98■□□□□ 0.15
PTCH1-210ENST00000468211 MPV17L2Q567V2 206 aa15.98■□□□□ 0.15
PTCH1-210ENST00000468211 HMSDA8MTL9 139 aa15.96■□□□□ 0.15
PTCH1-210ENST00000468211 PFDN1O60925 122 aa15.96■□□□□ 0.15
PTCH1-210ENST00000468211 OR5AL1P0C617 328 aa15.96■□□□□ 0.15
PTCH1-210ENST00000468211 KCNIP4Q6PIL6 250 aa15.96■□□□□ 0.15
PTCH1-210ENST00000468211 TMUB2Q71RG4 321 aa15.96■□□□□ 0.15
PTCH1-210ENST00000468211 C15orf54Q8N8G6 183 aa15.96■□□□□ 0.15
PTCH1-210ENST00000468211 BCL2L11O43521 198 aa15.95■□□□□ 0.14
PTCH1-210ENST00000468211 H2AFB1P0C5Y9 115 aa15.95■□□□□ 0.14
PTCH1-210ENST00000468211 Q0VG73 95 aa15.95■□□□□ 0.14
PTCH1-210ENST00000468211 NTM-AS1Q6ZSK4 140 aa15.95■□□□□ 0.14
PTCH1-210ENST00000468211 KIF25-AS1Q9Y6Z4 181 aa15.95■□□□□ 0.14
PTCH1-210ENST00000468211 J3QL48 77 aa15.94■□□□□ 0.14
PTCH1-210ENST00000468211 CCL20P78556 96 aa15.94■□□□□ 0.14
PTCH1-210ENST00000468211 SPANXN1Q5VSR9 72 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms