RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 RBFOX3A6NFN3 312 aa12.71□□□□□ -0.37
YBX1-204ENST00000467957 DNAH10OSP0CZ25 163 aa12.71□□□□□ -0.37
YBX1-204ENST00000467957 WFDC10BQ8IUB3 73 aa12.71□□□□□ -0.37
YBX1-204ENST00000467957 DAZAP1Q96EP5 407 aaKnown RBP12.71□□□□□ -0.37
YBX1-204ENST00000467957 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.37
YBX1-204ENST00000467957 TRAV9-2A0A087WT02 112 aa12.7□□□□□ -0.38
YBX1-204ENST00000467957 A0A087WWL8 130 aa12.7□□□□□ -0.38
YBX1-204ENST00000467957 LINC00694P0DN24 101 aa12.7□□□□□ -0.38
YBX1-204ENST00000467957 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
YBX1-204ENST00000467957 TNP2Q05952 138 aa12.7□□□□□ -0.38
YBX1-204ENST00000467957 FAM74A4Q5TZK3 123 aa12.7□□□□□ -0.38
YBX1-204ENST00000467957 OR10AG1Q8NH19 301 aa12.7□□□□□ -0.38
YBX1-204ENST00000467957 ATP6V0E2Q8NHE4 81 aa12.7□□□□□ -0.38
YBX1-204ENST00000467957 TMEM250H0YL14 139 aa12.69□□□□□ -0.38
YBX1-204ENST00000467957 C14orf178Q8N769 122 aaPredicted RBP12.69□□□□□ -0.38
YBX1-204ENST00000467957 GTSF1LQ9H1H1 148 aa12.69□□□□□ -0.38
YBX1-204ENST00000467957 LINC00315P59091 139 aa12.68□□□□□ -0.38
YBX1-204ENST00000467957 RAB14P61106 215 aa12.68□□□□□ -0.38
YBX1-204ENST00000467957 OR2D3Q8NGH3 330 aa12.68□□□□□ -0.38
YBX1-204ENST00000467957 FAM210AQ96ND0 272 aa12.68□□□□□ -0.38
YBX1-204ENST00000467957 TRAV8-6A0A0B4J262 113 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 GAGE12JA6NER3 117 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 NDUFS6O75380 124 aaKnown RBP12.67□□□□□ -0.38
YBX1-204ENST00000467957 P01737 135 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 IGLC6P0CF74 106 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 EVI2AP22794 236 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 GAGE1Q13065 139 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 GAGE4Q13068 117 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 GAGE5Q13069 117 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 GAGE13Q4V321 117 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 LELP1Q5T871 98 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 SPANXN1Q5VSR9 72 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 Q9UF83 564 aa12.67□□□□□ -0.38
YBX1-204ENST00000467957 IGHV3-38A0A0C4DH36 116 aa12.66□□□□□ -0.38
YBX1-204ENST00000467957 TRBV10-1A0A0K0K1A3 114 aa12.66□□□□□ -0.38
YBX1-204ENST00000467957 XKRY2A2RUG3 117 aa12.66□□□□□ -0.38
YBX1-204ENST00000467957 TOR2AQ5JU69 321 aa12.66□□□□□ -0.38
YBX1-204ENST00000467957 Q6ZRN7 208 aaPredicted RBP12.66□□□□□ -0.38
YBX1-204ENST00000467957 GZMBP10144 247 aa12.65□□□□□ -0.38
YBX1-204ENST00000467957 RAB4BP61018 213 aa12.65□□□□□ -0.38
YBX1-204ENST00000467957 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
YBX1-204ENST00000467957 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
YBX1-204ENST00000467957 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
YBX1-204ENST00000467957 OCC1Q8TAD7 63 aa12.65□□□□□ -0.38
YBX1-204ENST00000467957 EIF5A2Q9GZV4 153 aaKnown RBP12.65□□□□□ -0.38
YBX1-204ENST00000467957 MUC21A0A0G2JKD1 596 aa12.64□□□□□ -0.39
YBX1-204ENST00000467957 MUC21A0A140T8X8 626 aa12.64□□□□□ -0.39
YBX1-204ENST00000467957 OR10J3Q5JRS4 329 aa12.64□□□□□ -0.39
YBX1-204ENST00000467957 NFE4Q86UQ8 179 aa12.64□□□□□ -0.39
YBX1-204ENST00000467957 C10orf126Q8N4M7 172 aa12.64□□□□□ -0.39
YBX1-204ENST00000467957 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
YBX1-204ENST00000467957 NUDT11Q96G61 164 aa12.64□□□□□ -0.39
YBX1-204ENST00000467957 F2Z2F3 143 aa12.63□□□□□ -0.39
YBX1-204ENST00000467957 K7EN84 100 aa12.63□□□□□ -0.39
YBX1-204ENST00000467957 KIF25-AS1Q9Y6Z4 181 aa12.63□□□□□ -0.39
YBX1-204ENST00000467957 A0A087WWC5 75 aa12.62□□□□□ -0.39
YBX1-204ENST00000467957 CACNG7P62955 275 aa12.62□□□□□ -0.39
YBX1-204ENST00000467957 OR10G8Q8NGN5 311 aa12.62□□□□□ -0.39
YBX1-204ENST00000467957 AP1S3Q96PC3 154 aa12.62□□□□□ -0.39
YBX1-204ENST00000467957 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
YBX1-204ENST00000467957 PKHD1P08F94 4074 aa12.62□□□□□ -0.39
YBX1-204ENST00000467957 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
YBX1-204ENST00000467957 ZNF56Q15929 161 aa12.61□□□□□ -0.39
YBX1-204ENST00000467957 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
YBX1-204ENST00000467957 TPPP3Q9BW30 176 aa12.61□□□□□ -0.39
YBX1-204ENST00000467957 TNFRSF18Q9Y5U5 241 aa12.61□□□□□ -0.39
YBX1-204ENST00000467957 TRBV7-3A0A075B6L6 115 aa12.6□□□□□ -0.39
YBX1-204ENST00000467957 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
YBX1-204ENST00000467957 SSTP61278 116 aa12.6□□□□□ -0.39
YBX1-204ENST00000467957 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
YBX1-204ENST00000467957 RNASE7Q9H1E1 156 aaKnown RBP12.6□□□□□ -0.39
YBX1-204ENST00000467957 SMDT1Q9H4I9 107 aa12.6□□□□□ -0.39
YBX1-204ENST00000467957 RPP21Q9H633 154 aaKnown RBP12.6□□□□□ -0.39
YBX1-204ENST00000467957 IBA57-AS1B1ANH7 110 aa12.59□□□□□ -0.39
YBX1-204ENST00000467957 SRP19P09132 144 aaKnown RBP12.59□□□□□ -0.39
YBX1-204ENST00000467957 CTRLP40313 264 aa12.59□□□□□ -0.39
YBX1-204ENST00000467957 UBE2D3P61077 147 aa12.59□□□□□ -0.39
YBX1-204ENST00000467957 UBE2D2P62837 147 aa12.59□□□□□ -0.39
YBX1-204ENST00000467957 PEA15Q15121 130 aa12.59□□□□□ -0.39
YBX1-204ENST00000467957 LYZL1Q6UWQ5 148 aa12.59□□□□□ -0.39
YBX1-204ENST00000467957 DNAH11Q96DT5 4516 aa12.58□□□□□ -0.39
YBX1-204ENST00000467957 CEBPGP53567 150 aa12.58□□□□□ -0.4
YBX1-204ENST00000467957 SRSF3P84103 164 aaKnown RBP12.58□□□□□ -0.4
YBX1-204ENST00000467957 FAM231DQ6ZW35 169 aa12.58□□□□□ -0.4
YBX1-204ENST00000467957 CNFNQ9BYD5 112 aa12.58□□□□□ -0.4
YBX1-204ENST00000467957 F5H697 171 aa12.57□□□□□ -0.4
YBX1-204ENST00000467957 NEXN-AS1Q8NBZ9 246 aa12.57□□□□□ -0.4
YBX1-204ENST00000467957 SMIM7Q9BQ49 75 aa12.57□□□□□ -0.4
YBX1-204ENST00000467957 C9JQL5 133 aa12.56□□□□□ -0.4
YBX1-204ENST00000467957 IGHV3-30P01768 117 aa12.56□□□□□ -0.4
YBX1-204ENST00000467957 IGHV3-33P01772 117 aa12.56□□□□□ -0.4
YBX1-204ENST00000467957 IGHV3-30-3P0DP02 117 aa12.56□□□□□ -0.4
YBX1-204ENST00000467957 IGHV3-30-5P0DP03 117 aa12.56□□□□□ -0.4
YBX1-204ENST00000467957 DYNC1H1Q14204 4646 aaKnown RBP12.56□□□□□ -0.4
YBX1-204ENST00000467957 ZNF727A8MUV8 499 aa12.55□□□□□ -0.4
YBX1-204ENST00000467957 TRGC1P0CF51 173 aa12.55□□□□□ -0.4
YBX1-204ENST00000467957 NTF3P20783 257 aa12.55□□□□□ -0.4
YBX1-204ENST00000467957 GATCO43716 136 aaKnown RBP12.54□□□□□ -0.4
YBX1-204ENST00000467957 LAGE3Q14657 143 aa12.54□□□□□ -0.4
YBX1-204ENST00000467957 CT83Q5H943 113 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms