RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 PIPP12273 146 aaPredicted RBP0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 ELOF1P60002 83 aaKnown RBP0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 UBE2G1P62253 170 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 C9orf116Q5BN46 136 aaPredicted RBP0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 SPTSSAQ969W0 71 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 LINC00470Q9BZP3 86 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 KNTC1P50748 2209 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 ABCA4P78363 2273 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 KIF13AQ9H1H9 1805 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 IBTKQ9P2D0 1353 aaPredicted RBP0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 TMEM2Q9UHN6 1383 aa0.82□□□□□ -2.28
PRPF40A-205ENST00000467114 SNCGO76070 127 aa0.81□□□□□ -2.28
PRPF40A-205ENST00000467114 RPL37P61927 97 aaKnown RBP0.81□□□□□ -2.28
PRPF40A-205ENST00000467114 EMX2Q04743 252 aa0.81□□□□□ -2.28
PRPF40A-205ENST00000467114 RPRMQ9NS64 109 aa0.81□□□□□ -2.28
PRPF40A-205ENST00000467114 ESPL1Q14674 2120 aa0.8□□□□□ -2.28
PRPF40A-205ENST00000467114 RBAKDNA6NC62 111 aa0.8□□□□□ -2.28
PRPF40A-205ENST00000467114 NDUFB6O95139 128 aa0.8□□□□□ -2.28
PRPF40A-205ENST00000467114 DSCR8Q96T75 97 aa0.8□□□□□ -2.28
PRPF40A-205ENST00000467114 PDCD10Q9BUL8 212 aa0.8□□□□□ -2.28
PRPF40A-205ENST00000467114 BCORL1Q5H9F3 1711 aa0.8□□□□□ -2.28
PRPF40A-205ENST00000467114 FBN2P35556 2912 aa0.8□□□□□ -2.28
PRPF40A-205ENST00000467114 HIST1H1DP16402 221 aaKnown RBP0.79□□□□□ -2.28
PRPF40A-205ENST00000467114 CCL3L1P16619 93 aa0.79□□□□□ -2.28
PRPF40A-205ENST00000467114 C20orf197Q8N268 126 aa0.79□□□□□ -2.28
PRPF40A-205ENST00000467114 GRIN2AQ12879 1464 aa0.79□□□□□ -2.28
PRPF40A-205ENST00000467114 ASH1LQ9NR48 2969 aaKnown RBP0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 LOC285556D6RIA3 1793 aa0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 A0A096LNT2 108 aa0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 FAM92AA1XBS5 289 aa0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 SSBP1Q04837 148 aaKnown RBP0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 S100A7L2Q5SY68 101 aa0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 C4orf33Q8N1A6 199 aa0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 COX7B2Q8TF08 81 aa0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 C1orf54Q8WWF1 131 aa0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 SEC11CQ9BY50 192 aa0.78□□□□□ -2.28
PRPF40A-205ENST00000467114 ZNF469Q96JG9 3925 aaPredicted RBP0.78□□□□□ -2.29
PRPF40A-205ENST00000467114 EFCAB10A6NFE3 127 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 IFNA17P01571 189 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 CBLN1P23435 193 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 FAM74A4Q5TZK3 123 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 SPTSSBQ8NFR3 76 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 C10orf82Q8WW14 230 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 COPS9Q8WXC6 57 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 AGPAT4-IT1Q9H0P7 198 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 C10orf95Q9H7T3 257 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 AKAP11Q9UKA4 1901 aa0.77□□□□□ -2.29
PRPF40A-205ENST00000467114 ZNF462Q96JM2 2506 aa0.76□□□□□ -2.29
PRPF40A-205ENST00000467114 ABCA1O95477 2261 aa0.76□□□□□ -2.29
PRPF40A-205ENST00000467114 ZNF142P52746 1687 aaPredicted RBP0.76□□□□□ -2.29
PRPF40A-205ENST00000467114 MYOM3Q5VTT5 1437 aa0.76□□□□□ -2.29
PRPF40A-205ENST00000467114 MEIG1Q5JSS6 88 aa0.76□□□□□ -2.29
PRPF40A-205ENST00000467114 RPL13AP3Q6NVV1 102 aa0.76□□□□□ -2.29
PRPF40A-205ENST00000467114 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
PRPF40A-205ENST00000467114 KIAA0100Q14667 2235 aaKnown RBP0.76□□□□□ -2.29
PRPF40A-205ENST00000467114 DAPK1P53355 1430 aa0.75□□□□□ -2.29
PRPF40A-205ENST00000467114 A0A087WTM6 91 aa0.75□□□□□ -2.29
PRPF40A-205ENST00000467114 MCRIP1C9JLW8 97 aa0.75□□□□□ -2.29
PRPF40A-205ENST00000467114 FAM103A1Q9BTL3 118 aaKnown RBP0.75□□□□□ -2.29
PRPF40A-205ENST00000467114 SNRNP25Q9BV90 132 aaKnown RBP0.75□□□□□ -2.29
PRPF40A-205ENST00000467114 V9GYV3 84 aa0.75□□□□□ -2.29
PRPF40A-205ENST00000467114 NOTCH1P46531 2555 aa0.75□□□□□ -2.29
PRPF40A-205ENST00000467114 F2Z2F3 143 aa0.74□□□□□ -2.29
PRPF40A-205ENST00000467114 SPINK7P58062 85 aa0.74□□□□□ -2.29
PRPF40A-205ENST00000467114 RERGLQ9H628 205 aa0.74□□□□□ -2.29
PRPF40A-205ENST00000467114 MUC22E2RYF6 1773 aaPredicted RBP0.74□□□□□ -2.29
PRPF40A-205ENST00000467114 TRBV7-1A0A0A6YYK4 115 aa0.73□□□□□ -2.29
PRPF40A-205ENST00000467114 APODP05090 189 aa0.73□□□□□ -2.29
PRPF40A-205ENST00000467114 UBE2D1P51668 147 aa0.73□□□□□ -2.29
PRPF40A-205ENST00000467114 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
PRPF40A-205ENST00000467114 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.73□□□□□ -2.29
PRPF40A-205ENST00000467114 MED13LQ71F56 2210 aa0.73□□□□□ -2.29
PRPF40A-205ENST00000467114 ZNF518AQ6AHZ1 1483 aa0.73□□□□□ -2.29
PRPF40A-205ENST00000467114 ZNF818PQ6ZRF7 136 aa0.72□□□□□ -2.29
PRPF40A-205ENST00000467114 NAA60Q9H7X0 242 aa0.72□□□□□ -2.29
PRPF40A-205ENST00000467114 SERP1Q9Y6X1 66 aa0.72□□□□□ -2.29
PRPF40A-205ENST00000467114 LAMB1P07942 1786 aa0.72□□□□□ -2.29
PRPF40A-205ENST00000467114 PIGBOS1A0A0B4J2F0 54 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 TRBV10-3A0A0K0K1G6 114 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 LOC100130705A0A1B0GUX0 176 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 CCL8P80075 99 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 RBM3P98179 157 aaKnown RBP0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 LSM10Q969L4 123 aaKnown RBP0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 Q96NJ1 140 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 CFTRP13569 1480 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 TANC1Q9C0D5 1861 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 NAIPQ13075 1403 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 SPEF2Q9C093 1822 aa0.71□□□□□ -2.3
PRPF40A-205ENST00000467114 ROCK2O75116 1388 aaKnown RBP0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 NRXN2Q9P2S2 1712 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 PLXNA1Q9UIW2 1896 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 A0A1B0GV90 55 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 CLPSL1A2RUU4 121 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 FGF7P21781 194 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 EDDM3BP56851 147 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 BTG2P78543 158 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 BPESC1Q9GZL8 116 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 LINC00312Q9Y6C7 94 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 PHIPQ8WWQ0 1821 aa0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 MYH9P35579 1960 aaKnown RBP0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms