RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 THYN1Q9P016 225 aa2.6□□□□□ -1.99
SORT1-202ENST00000466471 TP73-AS1Q9UF72 201 aa2.6□□□□□ -1.99
SORT1-202ENST00000466471 RPUSD1Q9UJJ7 312 aaKnown RBP2.6□□□□□ -1.99
SORT1-202ENST00000466471 FAM215AQ9Y5M1 114 aa2.6□□□□□ -1.99
SORT1-202ENST00000466471 TSSC4Q9Y5U2 329 aaPredicted RBP2.6□□□□□ -1.99
SORT1-202ENST00000466471 DOCK7Q96N67 2140 aa2.6□□□□□ -1.99
SORT1-202ENST00000466471 KIAA2026Q5HYC2 2103 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 IGLV3-9A0A075B6K5 115 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 TRBV19A0A075B6N1 114 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 TRBV20-1A0A075B6N2 111 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 TRAV5A0A0B4J249 113 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 CENPVL3A0A0U1RRI6 287 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 PINLYPA6NC86 204 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 LINC01549A6NIU2 74 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 PRAC2D3DTV9 90 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 COX7A2P2O60397 106 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 IGLV2-23P01705 113 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 APOA2P02652 100 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 SLC25A5P05141 298 aaKnown RBP2.59□□□□□ -1.99
SORT1-202ENST00000466471 IGLC6P0CF74 106 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 SAA2P0DJI9 122 aaPredicted RBP2.59□□□□□ -1.99
SORT1-202ENST00000466471 CCL2P13500 99 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 IFI27P40305 119 aaPredicted RBP2.59□□□□□ -1.99
SORT1-202ENST00000466471 MAGEA5P43359 124 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 XGP55808 180 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 TCTAP57738 103 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 SMAGPQ0VAQ4 97 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 WFDC2Q14508 124 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 MRPL23Q16540 153 aaKnown RBP2.59□□□□□ -1.99
SORT1-202ENST00000466471 LTC4SQ16873 150 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 RPL39P5Q59GN2 51 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 SPINK9Q5DT21 86 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 TEX36Q5VZQ5 186 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 RUSC1-AS1Q66K80 236 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 LINC00305Q7Z4B0 112 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 PCP2Q8IVA1 136 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 AMN1Q8IY45 258 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 MDS2Q8NDY4 140 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 MYOZ3Q8TDC0 251 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 RPEQ96AT9 228 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 PGLYRP4Q96LB8 373 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 FAM218AQ96MZ4 157 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 CITED1Q99966 193 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 CHAC1Q9BUX1 264 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 C1QTNF4Q9BXJ3 329 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 GTSF1LQ9H1H1 148 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 Q9H3A6 140 aa2.59□□□□□ -1.99
SORT1-202ENST00000466471 NXT2Q9NPJ8 142 aaKnown RBP2.59□□□□□ -1.99
SORT1-202ENST00000466471 CSDC2Q9Y534 153 aaKnown RBP2.59□□□□□ -1.99
SORT1-202ENST00000466471 PKHD1P08F94 4074 aa2.59□□□□□ -2
SORT1-202ENST00000466471 A0A087WW49 117 aa2.58□□□□□ -2
SORT1-202ENST00000466471 A0A087WX48 190 aa2.58□□□□□ -2
SORT1-202ENST00000466471 DEFB108AA8MXU0 73 aa2.58□□□□□ -2
SORT1-202ENST00000466471 FCN3O75636 299 aa2.58□□□□□ -2
SORT1-202ENST00000466471 NXPH4O95158 308 aa2.58□□□□□ -2
SORT1-202ENST00000466471 IGHV3-13P01766 116 aa2.58□□□□□ -2
SORT1-202ENST00000466471 IGKCP01834 107 aa2.58□□□□□ -2
SORT1-202ENST00000466471 ARMS2P0C7Q2 107 aa2.58□□□□□ -2
SORT1-202ENST00000466471 SAA1P0DJI8 122 aaPredicted RBP2.58□□□□□ -2
SORT1-202ENST00000466471 PYYP10082 97 aa2.58□□□□□ -2
SORT1-202ENST00000466471 IGHV1-2P23083 117 aa2.58□□□□□ -2
SORT1-202ENST00000466471 S100A7P31151 101 aa2.58□□□□□ -2
SORT1-202ENST00000466471 HILS1P60008 231 aa2.58□□□□□ -2
SORT1-202ENST00000466471 RPL32P62910 135 aaKnown RBP2.58□□□□□ -2
SORT1-202ENST00000466471 WT1-ASQ06250 92 aa2.58□□□□□ -2
SORT1-202ENST00000466471 ALKBH6Q3KRA9 238 aa2.58□□□□□ -2
SORT1-202ENST00000466471 ETDBQ3ZM63 59 aa2.58□□□□□ -2
SORT1-202ENST00000466471 MRPL51Q4U2R6 128 aaKnown RBP2.58□□□□□ -2
SORT1-202ENST00000466471 CASC10Q5T4H9 136 aa2.58□□□□□ -2
SORT1-202ENST00000466471 MORN3Q6PF18 240 aaPredicted RBP2.58□□□□□ -2
SORT1-202ENST00000466471 Q6ZT83 130 aa2.58□□□□□ -2
SORT1-202ENST00000466471 Q6ZUT4 128 aa2.58□□□□□ -2
SORT1-202ENST00000466471 C9orf139Q6ZV77 190 aa2.58□□□□□ -2
SORT1-202ENST00000466471 S100A7AQ86SG5 101 aa2.58□□□□□ -2
SORT1-202ENST00000466471 TEN1Q86WV5 123 aa2.58□□□□□ -2
SORT1-202ENST00000466471 VKORC1L1Q8N0U8 176 aa2.58□□□□□ -2
SORT1-202ENST00000466471 POM121L12Q8N7R1 296 aa2.58□□□□□ -2
SORT1-202ENST00000466471 Q8N8P6 123 aa2.58□□□□□ -2
SORT1-202ENST00000466471 LINC01560Q8TB33 94 aa2.58□□□□□ -2
SORT1-202ENST00000466471 MRAPQ8TCY5 172 aa2.58□□□□□ -2
SORT1-202ENST00000466471 PPDPFLQ8WWR9 84 aa2.58□□□□□ -2
SORT1-202ENST00000466471 RNF185Q96GF1 192 aa2.58□□□□□ -2
SORT1-202ENST00000466471 PRELID3AQ96N28 172 aa2.58□□□□□ -2
SORT1-202ENST00000466471 SHANK2-AS3Q9BTD1 123 aa2.58□□□□□ -2
SORT1-202ENST00000466471 PSG8Q9UQ74 426 aa2.58□□□□□ -2
SORT1-202ENST00000466471 NCKAP5O14513 1909 aa2.58□□□□□ -2
SORT1-202ENST00000466471 IGKV2D-26A0A0A0MRZ7 120 aa2.57□□□□□ -2
SORT1-202ENST00000466471 IGHV3-43A0A0B4J1X8 118 aa2.57□□□□□ -2
SORT1-202ENST00000466471 RBAKDNA6NC62 111 aa2.57□□□□□ -2
SORT1-202ENST00000466471 SMIM1B2RUZ4 78 aa2.57□□□□□ -2
SORT1-202ENST00000466471 E7EUB6 86 aa2.57□□□□□ -2
SORT1-202ENST00000466471 H3BRN7 92 aa2.57□□□□□ -2
SORT1-202ENST00000466471 I3L2K1 104 aa2.57□□□□□ -2
SORT1-202ENST00000466471 RS1O15537 224 aa2.57□□□□□ -2
SORT1-202ENST00000466471 DPM2O94777 84 aa2.57□□□□□ -2
SORT1-202ENST00000466471 IGKV1-16P04430 117 aa2.57□□□□□ -2
SORT1-202ENST00000466471 CD7P09564 240 aa2.57□□□□□ -2
SORT1-202ENST00000466471 IGHV3-43DP0DP04 118 aa2.57□□□□□ -2
SORT1-202ENST00000466471 SLC25A16P16260 332 aa2.57□□□□□ -2
SORT1-202ENST00000466471 PLNP26678 52 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms