RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TMEM136Q6ZRR5 245 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 ZFP82Q8N141 532 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 POM121L12Q8N7R1 296 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 PRSS3P2Q8NHM4 247 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 RASL10AQ92737 203 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 OVOL2Q9BRP0 275 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 XCL2Q9UBD3 114 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 TP53TG1Q9Y2A0 90 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 NOTCH3Q9UM47 2321 aa3.95□□□□□ -1.78
VPS41-211ENST00000466017 TMSB15BA0A087X1C1 80 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 GRIFINA4D1Z8 144 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 CBY3A6NI87 242 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 C1orf196B1AJZ1 125 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 SNURFLB1AK76 121 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 G3V4G9 280 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 J3KRW8 73 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 M0R2P5 195 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 PPBPP02775 128 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 TRGC1P0CF51 173 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 IGHV4-30-4P0DP06 118 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 RPS10P46783 165 aaKnown RBP3.94□□□□□ -1.78
VPS41-211ENST00000466017 TCL1AP56279 114 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 FXYD7P58549 80 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 ZNF415Q09FC8 603 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 MUC21Q5SSG8 566 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 SPANXN1Q5VSR9 72 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 FAM104BQ5XKR9 115 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 C11orf72Q8NBR9 251 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 RNASE8Q8TDE3 154 aaKnown RBP3.94□□□□□ -1.78
VPS41-211ENST00000466017 TMEM263Q8WUH6 116 aaKnown RBP3.94□□□□□ -1.78
VPS41-211ENST00000466017 RNF183Q96D59 192 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 C16orf74Q96GX8 76 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 C18orf15Q96N68 181 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 WFDC10AQ9H1F0 79 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 MDFICQ9P1T7 246 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 PHLDA3Q9Y5J5 127 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 TRAPPC1Q9Y5R8 145 aa3.94□□□□□ -1.78
VPS41-211ENST00000466017 PRSS47A8MTI9 375 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 A8MWV9 139 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 SPINK4O60575 86 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 TRGC2P03986 189 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 RPL35AP18077 110 aaKnown RBP3.93□□□□□ -1.78
VPS41-211ENST00000466017 Q0VG73 95 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 RRN3P1Q2M238 152 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 COA6Q5JTJ3 125 aaKnown RBP3.93□□□□□ -1.78
VPS41-211ENST00000466017 MRPL54Q6P161 138 aaKnown RBP3.93□□□□□ -1.78
VPS41-211ENST00000466017 SMIM15Q7Z3B0 74 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 OR10AG1Q8NH19 301 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 RNF185Q96GF1 192 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 EDA2RQ9HAV5 297 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 GSN-AS1Q9NRJ2 163 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 NAGKQ9UJ70 344 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 LAMTOR2Q9Y2Q5 125 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 KIF25-AS1Q9Y6Z4 181 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 U3KQK5 164 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 MUC4Q99102 2169 aa3.93□□□□□ -1.78
VPS41-211ENST00000466017 CMYA5Q8N3K9 4069 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 TRRAPQ9Y4A5 3859 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 PLAC8L1A1L4L8 177 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 H3BVH4 76 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 M0R381 172 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 RS1O15537 224 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 PPP1R17O96001 155 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 APCSP02743 223 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 CRYGDP07320 174 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 FRMD6-AS1P0C7T7 363 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 MIFP14174 115 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 AZU1P20160 251 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 RAB4AP20338 218 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 CAMPP49913 170 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 LINC00315P59091 139 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 RAB5BP61020 215 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 FABP9Q0Z7S8 132 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 TWIST1Q15672 202 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 OR10J3Q5JRS4 329 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 ZFP2Q6ZN57 461 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 LINC00612Q8N6U2 182 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 MRAP2Q96G30 205 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 RCHY1Q96PM5 261 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 TMEM208Q9BTX3 173 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 DPH3P1Q9H4G8 78 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 MSRB1Q9NZV6 116 aa3.92□□□□□ -1.78
VPS41-211ENST00000466017 TIMM8BQ9Y5J9 83 aaPredicted RBP3.92□□□□□ -1.78
VPS41-211ENST00000466017 LYRM9A8MSI8 78 aa3.91□□□□□ -1.78
VPS41-211ENST00000466017 COL6A5A8TX70 2615 aa3.91□□□□□ -1.78
VPS41-211ENST00000466017 RHODO00212 210 aa3.91□□□□□ -1.78
VPS41-211ENST00000466017 SLAQ13239 276 aa3.91□□□□□ -1.78
VPS41-211ENST00000466017 ZNF876PQ49A33 203 aa3.91□□□□□ -1.78
VPS41-211ENST00000466017 UFSP1Q6NVU6 142 aa3.91□□□□□ -1.78
VPS41-211ENST00000466017 AP1S3Q96PC3 154 aa3.91□□□□□ -1.78
VPS41-211ENST00000466017 ALKBH7Q9BT30 221 aaPredicted RBP3.91□□□□□ -1.78
VPS41-211ENST00000466017 TPPP3Q9BW30 176 aa3.91□□□□□ -1.78
VPS41-211ENST00000466017 TRAV4A0A0B4J268 109 aa3.9□□□□□ -1.79
VPS41-211ENST00000466017 TRBV6-5A0A0K0K1A5 114 aa3.9□□□□□ -1.79
VPS41-211ENST00000466017 TEX48A0A1B0GUV7 120 aa3.9□□□□□ -1.79
VPS41-211ENST00000466017 K7EIL1 84 aa3.9□□□□□ -1.79
VPS41-211ENST00000466017 HIST1H2BKO60814 126 aa3.9□□□□□ -1.79
VPS41-211ENST00000466017 HIST1H2BJP06899 126 aa3.9□□□□□ -1.79
VPS41-211ENST00000466017 ESDP10768 282 aa3.9□□□□□ -1.79
VPS41-211ENST00000466017 EVI2AP22794 236 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms