RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PYDC1Q8WXC3 89 aa0.02□□□□□ -2.41
SMC4-205ENST00000465563 IFI27L1Q96BM0 104 aa0.02□□□□□ -2.41
SMC4-205ENST00000465563 ERCC6Q03468 1493 aa0.02□□□□□ -2.41
SMC4-205ENST00000465563 SSC5DA1L4H1 1573 aa0.02□□□□□ -2.41
SMC4-205ENST00000465563 SSPOA2VEC9 5147 aa0.01□□□□□ -2.41
SMC4-205ENST00000465563 J3QLW9 94 aa0.01□□□□□ -2.41
SMC4-205ENST00000465563 NPC2P61916 151 aa0.01□□□□□ -2.41
SMC4-205ENST00000465563 PPP1R1CQ8WVI7 109 aa0.01□□□□□ -2.41
SMC4-205ENST00000465563 SOGA1O94964 1423 aa0.01□□□□□ -2.41
SMC4-205ENST00000465563 CELSR1Q9NYQ6 3014 aa0.01□□□□□ -2.41
SMC4-205ENST00000465563 CDK13Q14004 1512 aaKnown RBP0.01□□□□□ -2.41
SMC4-205ENST00000465563 TRBV20-1A0A075B6N2 111 aa0□□□□□ -2.41
SMC4-205ENST00000465563 GVQW2A0A096LPI5 108 aaPredicted RBP0□□□□□ -2.41
SMC4-205ENST00000465563 ZNF670-ZNF695F2Z2N8 137 aa0□□□□□ -2.41
SMC4-205ENST00000465563 CCDC179H3BU77 68 aa0□□□□□ -2.41
SMC4-205ENST00000465563 ADGRB1O14514 1584 aa0□□□□□ -2.41
SMC4-205ENST00000465563 CCL3L1P16619 93 aa0□□□□□ -2.41
SMC4-205ENST00000465563 AIF1LQ9BQI0 150 aa0□□□□□ -2.41
SMC4-205ENST00000465563 ERG28Q9UKR5 140 aa0□□□□□ -2.41
SMC4-205ENST00000465563 OVOS2A0A0J9YW53 1432 aa-0.01□□□□□ -2.41
SMC4-205ENST00000465563 OVOS2Q6IE36 1432 aa-0.01□□□□□ -2.41
SMC4-205ENST00000465563 IGLC6P0CF74 106 aa-0.01□□□□□ -2.41
SMC4-205ENST00000465563 HIST1H1AQ02539 215 aaPredicted RBP-0.01□□□□□ -2.41
SMC4-205ENST00000465563 CEP152O94986 1710 aa-0.01□□□□□ -2.41
SMC4-205ENST00000465563 LAMC3Q9Y6N6 1575 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 TCRBV3S1A0A5B6 114 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 ARPC5O15511 151 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 PITX3O75364 302 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 TSPAN19P0C672 248 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 LINC01545Q5VT33 79 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 Q96NJ1 140 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 PRR15LQ9BU68 103 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
SMC4-205ENST00000465563 PRG4Q92954 1404 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-205ENST00000465563 ARHGEF10O15013 1369 aa-0.03□□□□□ -2.41
SMC4-205ENST00000465563 SIPA1L3O60292 1781 aaPredicted RBP-0.03□□□□□ -2.41
SMC4-205ENST00000465563 FAM236AA0A1B0GUQ0 79 aa-0.03□□□□□ -2.41
SMC4-205ENST00000465563 FAM236BA0A1B0GV22 79 aa-0.03□□□□□ -2.41
SMC4-205ENST00000465563 RBAKDNA6NC62 111 aa-0.03□□□□□ -2.41
SMC4-205ENST00000465563 CYP2G1PQ6ZSU1 146 aa-0.03□□□□□ -2.41
SMC4-205ENST00000465563 BPESC1Q9GZL8 116 aa-0.03□□□□□ -2.41
SMC4-205ENST00000465563 UNC13BO14795 1591 aa-0.03□□□□□ -2.41
SMC4-205ENST00000465563 MYH9P35579 1960 aaKnown RBP-0.04□□□□□ -2.42
SMC4-205ENST00000465563 CKS1BP61024 79 aa-0.04□□□□□ -2.42
SMC4-205ENST00000465563 NCS1P62166 190 aa-0.04□□□□□ -2.42
SMC4-205ENST00000465563 SSBP1Q04837 148 aaKnown RBP-0.04□□□□□ -2.42
SMC4-205ENST00000465563 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.04□□□□□ -2.42
SMC4-205ENST00000465563 NDUFA12Q9UI09 145 aa-0.04□□□□□ -2.42
SMC4-205ENST00000465563 DISP2A7MBM2 1401 aa-0.04□□□□□ -2.42
SMC4-205ENST00000465563 UBR5O95071 2799 aaPredicted RBP-0.05□□□□□ -2.42
SMC4-205ENST00000465563 TRAV12-3A0A0B4J271 114 aa-0.05□□□□□ -2.42
SMC4-205ENST00000465563 F2Z2F3 143 aa-0.05□□□□□ -2.42
SMC4-205ENST00000465563 LINC00694P0DN24 101 aa-0.05□□□□□ -2.42
SMC4-205ENST00000465563 C20orf197Q8N268 126 aa-0.05□□□□□ -2.42
SMC4-205ENST00000465563 MMGT1Q8N4V1 131 aa-0.05□□□□□ -2.42
SMC4-205ENST00000465563 HIVEP3Q5T1R4 2406 aa-0.05□□□□□ -2.42
SMC4-205ENST00000465563 WNK2Q9Y3S1 2297 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 SPCS2Q15005 226 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 Q5BKY6 102 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 MIC13Q5XKP0 118 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 VSTM2AQ8TAG5 236 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 SMIM11BQ8TCY0 68 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 COX7B2Q8TF08 81 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 SAR1AQ9NR31 198 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 COL7A1Q02388 2944 aa-0.06□□□□□ -2.42
SMC4-205ENST00000465563 UNC79Q9P2D8 2635 aa-0.07□□□□□ -2.42
SMC4-205ENST00000465563 M0R129 80 aa-0.07□□□□□ -2.42
SMC4-205ENST00000465563 NCR2O95944 276 aa-0.07□□□□□ -2.42
SMC4-205ENST00000465563 C4orf33Q8N1A6 199 aa-0.07□□□□□ -2.42
SMC4-205ENST00000465563 GSKIPQ9P0R6 139 aa-0.07□□□□□ -2.42
SMC4-205ENST00000465563 LOC105371267A0A1B0GV96 52 aa-0.08□□□□□ -2.42
SMC4-205ENST00000465563 CLPSL1A2RUU4 121 aa-0.08□□□□□ -2.42
SMC4-205ENST00000465563 COX4I1P13073 169 aa-0.08□□□□□ -2.42
SMC4-205ENST00000465563 ALX1Q15699 326 aa-0.08□□□□□ -2.42
SMC4-205ENST00000465563 SMIM3Q9BZL3 60 aa-0.08□□□□□ -2.42
SMC4-205ENST00000465563 BATF3Q9NR55 127 aa-0.08□□□□□ -2.42
SMC4-205ENST00000465563 TRBV7-1A0A0A6YYK4 115 aa-0.09□□□□□ -2.42
SMC4-205ENST00000465563 NMBP08949 121 aa-0.09□□□□□ -2.42
SMC4-205ENST00000465563 SLC48A1Q6P1K1 146 aa-0.09□□□□□ -2.42
SMC4-205ENST00000465563 SPTBN2O15020 2390 aa-0.1□□□□□ -2.42
SMC4-205ENST00000465563 PIRTP0C851 137 aa-0.1□□□□□ -2.43
SMC4-205ENST00000465563 C9orf116Q5BN46 136 aaPredicted RBP-0.1□□□□□ -2.43
SMC4-205ENST00000465563 SPANXN1Q5VSR9 72 aa-0.1□□□□□ -2.43
SMC4-205ENST00000465563 CTAGE3PQ8IX95 158 aa-0.1□□□□□ -2.43
SMC4-205ENST00000465563 TMEM242Q9NWH2 141 aa-0.1□□□□□ -2.43
SMC4-205ENST00000465563 V9GYV3 84 aa-0.1□□□□□ -2.43
SMC4-205ENST00000465563 MYH8P13535 1937 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 FHAD1B1AJZ9 1412 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 PLCE1Q9P212 2302 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 SPINK1P00995 79 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 Q6ZUT4 128 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 C10orf82Q8WW14 230 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 CHD9Q3L8U1 2897 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 TMEM2Q9UHN6 1383 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 C2CD3Q4AC94 2353 aa-0.11□□□□□ -2.43
SMC4-205ENST00000465563 NCOR1O75376 2440 aa-0.12□□□□□ -2.43
SMC4-205ENST00000465563 UBE2D1P51668 147 aa-0.12□□□□□ -2.43
SMC4-205ENST00000465563 COX6A2Q02221 97 aa-0.12□□□□□ -2.43
SMC4-205ENST00000465563 FAM74A4Q5TZK3 123 aa-0.12□□□□□ -2.43
SMC4-205ENST00000465563 Q6ZRX8 168 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms