RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 F6UZH7 168 aa9.63□□□□□ -0.87
HDAC6-214ENST00000465269 PEX7O00628 323 aa9.63□□□□□ -0.87
HDAC6-214ENST00000465269 IFNA1P01562 189 aa9.63□□□□□ -0.87
HDAC6-214ENST00000465269 NMBP08949 121 aa9.63□□□□□ -0.87
HDAC6-214ENST00000465269 ZNF138P52744 262 aa9.63□□□□□ -0.87
HDAC6-214ENST00000465269 TMEM183BQ1AE95 376 aa9.63□□□□□ -0.87
HDAC6-214ENST00000465269 TMEM183AQ8IXX5 376 aa9.63□□□□□ -0.87
HDAC6-214ENST00000465269 ZNF492Q9P255 531 aa9.63□□□□□ -0.87
HDAC6-214ENST00000465269 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-214ENST00000465269 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
HDAC6-214ENST00000465269 K7EQM0 130 aa9.62□□□□□ -0.87
HDAC6-214ENST00000465269 GATA1P15976 413 aaPredicted RBP9.62□□□□□ -0.87
HDAC6-214ENST00000465269 SH2D6Q7Z4S9 175 aa9.62□□□□□ -0.87
HDAC6-214ENST00000465269 PRNTQ86SH4 94 aa9.62□□□□□ -0.87
HDAC6-214ENST00000465269 CYB561D1Q8N8Q1 229 aa9.62□□□□□ -0.87
HDAC6-214ENST00000465269 HIST1H2BAQ96A08 127 aa9.62□□□□□ -0.87
HDAC6-214ENST00000465269 VAX2Q9UIW0 290 aa9.62□□□□□ -0.87
HDAC6-214ENST00000465269 PSG8Q9UQ74 426 aa9.62□□□□□ -0.87
HDAC6-214ENST00000465269 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
HDAC6-214ENST00000465269 SERTM2A0A1B0GWG4 89 aa9.61□□□□□ -0.87
HDAC6-214ENST00000465269 SCO2A0A1W2PP80 73 aa9.61□□□□□ -0.87
HDAC6-214ENST00000465269 BCL2P10415 239 aa9.61□□□□□ -0.87
HDAC6-214ENST00000465269 RAB14P61106 215 aa9.61□□□□□ -0.87
HDAC6-214ENST00000465269 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
HDAC6-214ENST00000465269 SLC25A29Q8N8R3 303 aa9.61□□□□□ -0.87
HDAC6-214ENST00000465269 TVP23CQ96ET8 276 aa9.61□□□□□ -0.87
HDAC6-214ENST00000465269 IGHV3-73A0A0B4J1V6 119 aa9.6□□□□□ -0.87
HDAC6-214ENST00000465269 PFN1P07737 140 aaKnown RBP9.6□□□□□ -0.87
HDAC6-214ENST00000465269 AKR1C3P42330 323 aa9.6□□□□□ -0.87
HDAC6-214ENST00000465269 MEF2BQ02080 365 aaPredicted RBP9.6□□□□□ -0.87
HDAC6-214ENST00000465269 TMEM75Q8N9X5 138 aa9.6□□□□□ -0.87
HDAC6-214ENST00000465269 ATP6V0E2Q8NHE4 81 aa9.6□□□□□ -0.87
HDAC6-214ENST00000465269 EIF5A2Q9GZV4 153 aaKnown RBP9.6□□□□□ -0.87
HDAC6-214ENST00000465269 TOR2AQ5JU69 321 aa9.59□□□□□ -0.87
HDAC6-214ENST00000465269 FAM210AQ96ND0 272 aa9.59□□□□□ -0.87
HDAC6-214ENST00000465269 TREM1Q9NP99 234 aa9.59□□□□□ -0.87
HDAC6-214ENST00000465269 MED9Q9NWA0 146 aa9.59□□□□□ -0.87
HDAC6-214ENST00000465269 TAGLN2P37802 199 aaKnown RBP9.58□□□□□ -0.88
HDAC6-214ENST00000465269 UBE2G1P62253 170 aa9.58□□□□□ -0.88
HDAC6-214ENST00000465269 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
HDAC6-214ENST00000465269 TCEAL7Q9BRU2 100 aa9.58□□□□□ -0.88
HDAC6-214ENST00000465269 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
HDAC6-214ENST00000465269 GNRH2O43555 120 aa9.57□□□□□ -0.88
HDAC6-214ENST00000465269 PDE6DO43924 150 aa9.57□□□□□ -0.88
HDAC6-214ENST00000465269 FMC1Q96HJ9 113 aa9.57□□□□□ -0.88
HDAC6-214ENST00000465269 SPXQ9BT56 116 aa9.57□□□□□ -0.88
HDAC6-214ENST00000465269 NDFIP1Q9BT67 221 aa9.57□□□□□ -0.88
HDAC6-214ENST00000465269 DERL1Q9BUN8 251 aa9.57□□□□□ -0.88
HDAC6-214ENST00000465269 NAGKQ9UJ70 344 aa9.57□□□□□ -0.88
HDAC6-214ENST00000465269 LENEPQ9Y5L5 61 aa9.57□□□□□ -0.88
HDAC6-214ENST00000465269 TRBV7-9A0A0J9YWB2 115 aa9.56□□□□□ -0.88
HDAC6-214ENST00000465269 RAB19A4D1S5 217 aa9.56□□□□□ -0.88
HDAC6-214ENST00000465269 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
HDAC6-214ENST00000465269 CEBPGP53567 150 aa9.56□□□□□ -0.88
HDAC6-214ENST00000465269 SRSF3P84103 164 aaKnown RBP9.56□□□□□ -0.88
HDAC6-214ENST00000465269 CLLU1Q5K131 121 aa9.56□□□□□ -0.88
HDAC6-214ENST00000465269 SAPCD1Q5SSQ6 148 aa9.56□□□□□ -0.88
HDAC6-214ENST00000465269 C11orf52Q96A22 123 aa9.56□□□□□ -0.88
HDAC6-214ENST00000465269 DPH3P1Q9H4G8 78 aa9.56□□□□□ -0.88
HDAC6-214ENST00000465269 S100A9P06702 114 aaKnown RBP9.55□□□□□ -0.88
HDAC6-214ENST00000465269 RPL35P42766 123 aaKnown RBP9.55□□□□□ -0.88
HDAC6-214ENST00000465269 Q86TA4 180 aa9.55□□□□□ -0.88
HDAC6-214ENST00000465269 TRBV6-1A0A0K0K1D8 114 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 M0R2P5 195 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 GCGP01275 180 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 SRP19P09132 144 aaKnown RBP9.54□□□□□ -0.88
HDAC6-214ENST00000465269 ZNF80P51504 273 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-214ENST00000465269 SMUG1Q53HV7 270 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 BAGE2Q86Y30 109 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 LINC01600Q96MT4 127 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 PRADC1Q9BSG0 188 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 Q9UF83 564 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 KLK12Q9UKR0 248 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 ZFP30Q9Y2G7 519 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 COX11Q9Y6N1 276 aa9.54□□□□□ -0.88
HDAC6-214ENST00000465269 TRGV11A0A075B6L2 103 aa9.53□□□□□ -0.88
HDAC6-214ENST00000465269 LTAP01374 205 aa9.53□□□□□ -0.88
HDAC6-214ENST00000465269 PEA15Q15121 130 aa9.53□□□□□ -0.88
HDAC6-214ENST00000465269 ZNF674Q2M3X9 581 aa9.53□□□□□ -0.88
HDAC6-214ENST00000465269 FAM159AQ6UWV7 190 aa9.53□□□□□ -0.88
HDAC6-214ENST00000465269 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
HDAC6-214ENST00000465269 C9JQL5 133 aa9.52□□□□□ -0.89
HDAC6-214ENST00000465269 TMEM250H0YL14 139 aa9.52□□□□□ -0.89
HDAC6-214ENST00000465269 RHOHQ15669 191 aa9.52□□□□□ -0.89
HDAC6-214ENST00000465269 CENPWQ5EE01 88 aa9.52□□□□□ -0.89
HDAC6-214ENST00000465269 Q6AWC8 147 aa9.52□□□□□ -0.89
HDAC6-214ENST00000465269 RMI2Q96E14 147 aa9.52□□□□□ -0.89
HDAC6-214ENST00000465269 ZC2HC1AQ96GY0 325 aa9.52□□□□□ -0.89
HDAC6-214ENST00000465269 PARLQ9H300 379 aa9.52□□□□□ -0.89
HDAC6-214ENST00000465269 TRAV21A0A0B4J279 112 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 GAGE12JA6NER3 117 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 PGPEP1LA6NFU8 196 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 GNG4P50150 75 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 CRIP1P50238 77 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 GAGE1Q13065 139 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 GAGE4Q13068 117 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 GAGE5Q13069 117 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 GAGE13Q4V321 117 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 CFAP126Q5VTH2 177 aa9.51□□□□□ -0.89
HDAC6-214ENST00000465269 TRBV20OR9-2A0A075B6H5 130 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms