RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 COPS9Q8WXC6 57 aa0.43□□□□□ -2.34
GARNL3-213ENST00000464616 TMEM191AQ9H0A3 160 aa0.43□□□□□ -2.34
GARNL3-213ENST00000464616 CCDC167Q9P0B6 97 aa0.43□□□□□ -2.34
GARNL3-213ENST00000464616 NDUFA12Q9UI09 145 aa0.43□□□□□ -2.34
GARNL3-213ENST00000464616 PRG4Q92954 1404 aaPredicted RBP0.43□□□□□ -2.34
GARNL3-213ENST00000464616 MYH6P13533 1939 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 ERCC6Q03468 1493 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 TRAV12-3A0A0B4J271 114 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 NPFFO15130 113 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 APODP05090 189 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 CCL3L1P16619 93 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 C9orf116Q5BN46 136 aaPredicted RBP0.42□□□□□ -2.34
GARNL3-213ENST00000464616 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 KCNRGQ8N5I3 272 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 SMIM11BQ8TCY0 68 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 COX7B2Q8TF08 81 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 TMEM242Q9NWH2 141 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 PARP14Q460N5 1801 aa0.42□□□□□ -2.34
GARNL3-213ENST00000464616 PLXNA1Q9UIW2 1896 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 LAMC3Q9Y6N6 1575 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 TNCP24821 2201 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 NDUFB6O95139 128 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 PIRTP0C851 137 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 RPS25P62851 125 aaKnown RBP0.41□□□□□ -2.34
GARNL3-213ENST00000464616 S100A12P80511 92 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 TSTD1Q8NFU3 115 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 SPTSSAQ969W0 71 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 LAMB1P07942 1786 aa0.41□□□□□ -2.34
GARNL3-213ENST00000464616 ASH1LQ9NR48 2969 aaKnown RBP0.41□□□□□ -2.34
GARNL3-213ENST00000464616 TRBV7-1A0A0A6YYK4 115 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 FAM236AA0A1B0GUQ0 79 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 FAM236BA0A1B0GV22 79 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 SMIM6P0DI80 62 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 CBLN1P23435 193 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 MIC13Q5XKP0 118 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 Q6ZUT4 128 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 C20orf197Q8N268 126 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 TPT1P8Q9HAU6 139 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 ADGRB1O14514 1584 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 SYNJ1O43426 1573 aa0.4□□□□□ -2.35
GARNL3-213ENST00000464616 IL5P05113 134 aa0.39□□□□□ -2.35
GARNL3-213ENST00000464616 SELENOWP63302 87 aa0.39□□□□□ -2.35
GARNL3-213ENST00000464616 ZNF818PQ6ZRF7 136 aa0.39□□□□□ -2.35
GARNL3-213ENST00000464616 PROK2Q9HC23 129 aa0.39□□□□□ -2.35
GARNL3-213ENST00000464616 PTPRMP28827 1452 aa0.39□□□□□ -2.35
GARNL3-213ENST00000464616 ZDBF2Q9HCK1 2354 aa0.39□□□□□ -2.35
GARNL3-213ENST00000464616 SOGA1O94964 1423 aa0.38□□□□□ -2.35
GARNL3-213ENST00000464616 TNS1Q9HBL0 1735 aaKnown RBP0.38□□□□□ -2.35
GARNL3-213ENST00000464616 NRXN2Q9P2S2 1712 aa0.38□□□□□ -2.35
GARNL3-213ENST00000464616 SNCGO76070 127 aa0.38□□□□□ -2.35
GARNL3-213ENST00000464616 CCDC58Q4VC31 144 aa0.38□□□□□ -2.35
GARNL3-213ENST00000464616 MUC5BQ9HC84 5762 aaPredicted RBP0.38□□□□□ -2.35
GARNL3-213ENST00000464616 PHIPQ8WWQ0 1821 aa0.38□□□□□ -2.35
GARNL3-213ENST00000464616 AKAP11Q9UKA4 1901 aa0.37□□□□□ -2.35
GARNL3-213ENST00000464616 GVQW2A0A096LPI5 108 aaPredicted RBP0.37□□□□□ -2.35
GARNL3-213ENST00000464616 TFF1P04155 84 aa0.37□□□□□ -2.35
GARNL3-213ENST00000464616 NPC2P61916 151 aa0.37□□□□□ -2.35
GARNL3-213ENST00000464616 COX6A2Q02221 97 aa0.37□□□□□ -2.35
GARNL3-213ENST00000464616 INSL4Q14641 139 aa0.37□□□□□ -2.35
GARNL3-213ENST00000464616 KNTC1P50748 2209 aa0.37□□□□□ -2.35
GARNL3-213ENST00000464616 AHNAKQ09666 5890 aaKnown RBP0.36□□□□□ -2.35
GARNL3-213ENST00000464616 UNC13BO14795 1591 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 FAM92AA1XBS5 289 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 TMEM14DPA8MWL7 114 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 APOC4-APOC2K7ER74 178 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 PIN1P1O15428 100 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 ACYP2P14621 99 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 ARPC4P59998 168 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 CCL8P80075 99 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 Q5VV11 94 aa0.36□□□□□ -2.35
GARNL3-213ENST00000464616 HMGN1P05114 100 aa0.35□□□□□ -2.35
GARNL3-213ENST00000464616 UBE2G1P62253 170 aa0.35□□□□□ -2.35
GARNL3-213ENST00000464616 C12orf73Q69YU5 71 aa0.35□□□□□ -2.35
GARNL3-213ENST00000464616 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
GARNL3-213ENST00000464616 LRRC37A3O60309 1634 aa0.35□□□□□ -2.35
GARNL3-213ENST00000464616 A0A087WTM6 91 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 TRBV10-3A0A0K0K1G6 114 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 SPINK1P00995 79 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 KRTAP2-3P0C7H8 128 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 UBE2D1P51668 147 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 EDDM3BP56851 147 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 NAIPQ13075 1403 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 Q5BKY6 102 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 C1orf54Q8WWF1 131 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 DPH3Q96FX2 82 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 SDF2Q99470 211 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 KRTAP2-4Q9BYR9 128 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 KRTAP2-1Q9BYU5 128 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 GRIN2AQ12879 1464 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 ZNF518AQ6AHZ1 1483 aa0.34□□□□□ -2.36
GARNL3-213ENST00000464616 PITX3O75364 302 aa0.33□□□□□ -2.36
GARNL3-213ENST00000464616 GCHFRP30047 84 aa0.33□□□□□ -2.36
GARNL3-213ENST00000464616 Q6ZRX8 168 aa0.33□□□□□ -2.36
GARNL3-213ENST00000464616 Q96NJ1 140 aa0.33□□□□□ -2.36
GARNL3-213ENST00000464616 TSC22D3Q99576 134 aa0.33□□□□□ -2.36
GARNL3-213ENST00000464616 WFDC6Q9BQY6 131 aa0.33□□□□□ -2.36
GARNL3-213ENST00000464616 IFT140Q96RY7 1462 aa0.33□□□□□ -2.36
GARNL3-213ENST00000464616 IBTKQ9P2D0 1353 aaPredicted RBP0.32□□□□□ -2.36
GARNL3-213ENST00000464616 M0R129 80 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms