RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.9□□□□□ -0.35
LMO2-204ENST00000464025 DPM2O94777 84 aa12.9□□□□□ -0.35
LMO2-204ENST00000464025 IGKCP01834 107 aa12.9□□□□□ -0.35
LMO2-204ENST00000464025 GAGE1Q13065 139 aa12.9□□□□□ -0.35
LMO2-204ENST00000464025 SUMO4Q6EEV6 95 aa12.9□□□□□ -0.35
LMO2-204ENST00000464025 C2orf91Q6ZV80 131 aa12.9□□□□□ -0.35
LMO2-204ENST00000464025 DUX3Q96PT4 197 aa12.89□□□□□ -0.35
LMO2-204ENST00000464025 LINC00467Q9BRT7 94 aa12.89□□□□□ -0.35
LMO2-204ENST00000464025 YAE1D1Q9NRH1 226 aa12.89□□□□□ -0.35
LMO2-204ENST00000464025 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 CRYGDP07320 174 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 PIK3CD-AS1Q5SR53 167 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 BVES-AS1Q5T3Y7 98 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 PTH2Q96A98 100 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 RAX2Q96IS3 184 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 CSTL1Q9H114 145 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 JPT2Q9H910 190 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 TP73-AS1Q9UF72 201 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 MYO9AB2RTY4 2548 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 TLN2Q9Y4G6 2542 aa12.88□□□□□ -0.35
LMO2-204ENST00000464025 VCYO14598 125 aa12.87□□□□□ -0.35
LMO2-204ENST00000464025 MPV17L2Q567V2 206 aa12.87□□□□□ -0.35
LMO2-204ENST00000464025 RBMY1A1P0DJD3 496 aaKnown RBP12.86□□□□□ -0.35
LMO2-204ENST00000464025 RBMY1CP0DJD4 496 aa12.86□□□□□ -0.35
LMO2-204ENST00000464025 ZNF25P17030 456 aaPredicted RBP12.86□□□□□ -0.35
LMO2-204ENST00000464025 RBMY1FQ15415 496 aaKnown RBP12.86□□□□□ -0.35
LMO2-204ENST00000464025 JMJD8Q96S16 334 aa12.86□□□□□ -0.35
LMO2-204ENST00000464025 EDA2RQ9HAV5 297 aa12.86□□□□□ -0.35
LMO2-204ENST00000464025 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
LMO2-204ENST00000464025 RBMY1BA6NDE4 496 aaKnown RBP12.86□□□□□ -0.35
LMO2-204ENST00000464025 RBMY1EA6NEQ0 496 aaKnown RBP12.86□□□□□ -0.35
LMO2-204ENST00000464025 CCL24O00175 119 aa12.86□□□□□ -0.35
LMO2-204ENST00000464025 RBMY1DP0C7P1 496 aaKnown RBP12.86□□□□□ -0.35
LMO2-204ENST00000464025 CD300EQ496F6 205 aaPredicted RBP12.86□□□□□ -0.35
LMO2-204ENST00000464025 C2orf66Q6UXQ4 117 aa12.86□□□□□ -0.35
LMO2-204ENST00000464025 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
LMO2-204ENST00000464025 TMEM208Q9BTX3 173 aa12.86□□□□□ -0.35
LMO2-204ENST00000464025 TSSC4Q9Y5U2 329 aaPredicted RBP12.86□□□□□ -0.35
LMO2-204ENST00000464025 PDZD2O15018 2839 aa12.85□□□□□ -0.35
LMO2-204ENST00000464025 ANK3Q12955 4377 aaKnown RBP12.85□□□□□ -0.35
LMO2-204ENST00000464025 H7C1H1 209 aa12.85□□□□□ -0.35
LMO2-204ENST00000464025 PLNP26678 52 aa12.85□□□□□ -0.35
LMO2-204ENST00000464025 ERASQ7Z444 233 aa12.85□□□□□ -0.35
LMO2-204ENST00000464025 NEXN-AS1Q8NBZ9 246 aa12.85□□□□□ -0.35
LMO2-204ENST00000464025 MRPL35Q9NZE8 188 aaKnown RBP12.85□□□□□ -0.35
LMO2-204ENST00000464025 SONP18583 2426 aaKnown RBP12.84□□□□□ -0.35
LMO2-204ENST00000464025 A0A087WWL8 130 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 CBY3A6NI87 242 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 F8VRH5 84 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 M0QY20 66 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 CD28P10747 220 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 LINC01006Q8NI28 216 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 ORAOV1Q8WV07 137 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 CCDC168Q8NDH2 2452 aa12.84□□□□□ -0.35
LMO2-204ENST00000464025 FLNAP21333 2647 aaKnown RBP12.83□□□□□ -0.35
LMO2-204ENST00000464025 F5H697 171 aa12.83□□□□□ -0.36
LMO2-204ENST00000464025 RIPPLY3P57055 190 aa12.83□□□□□ -0.36
LMO2-204ENST00000464025 ZNF876PQ49A33 203 aa12.83□□□□□ -0.36
LMO2-204ENST00000464025 AKAP9Q99996 3911 aa12.83□□□□□ -0.36
LMO2-204ENST00000464025 ZFP2Q6ZN57 461 aa12.82□□□□□ -0.36
LMO2-204ENST00000464025 TRPT1Q86TN4 253 aaKnown RBP12.82□□□□□ -0.36
LMO2-204ENST00000464025 ZNF418Q8TF45 676 aaPredicted RBP12.82□□□□□ -0.36
LMO2-204ENST00000464025 KIR2DL4Q99706 377 aa12.82□□□□□ -0.36
LMO2-204ENST00000464025 CYSLTR1Q9Y271 337 aa12.82□□□□□ -0.36
LMO2-204ENST00000464025 COX11Q9Y6N1 276 aa12.82□□□□□ -0.36
LMO2-204ENST00000464025 TENM4Q6N022 2769 aa12.82□□□□□ -0.36
LMO2-204ENST00000464025 SDHAF1A6NFY7 115 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 NDUFA7O95182 113 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 HILS1P60008 231 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 ZC2HC1BQ5TFG8 222 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 HIGD1BQ9P298 99 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 SEC11AP67812 179 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 TMEM97Q5BJF2 176 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 MORN3Q6PF18 240 aaPredicted RBP12.81□□□□□ -0.36
LMO2-204ENST00000464025 PCP2Q8IVA1 136 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 BAALCQ8WXS3 180 aa12.81□□□□□ -0.36
LMO2-204ENST00000464025 CITED2Q99967 270 aaPredicted RBP12.81□□□□□ -0.36
LMO2-204ENST00000464025 NMUP48645 174 aa12.8□□□□□ -0.36
LMO2-204ENST00000464025 CMC4P56277 68 aaPredicted RBP12.8□□□□□ -0.36
LMO2-204ENST00000464025 ZNF415Q09FC8 603 aa12.8□□□□□ -0.36
LMO2-204ENST00000464025 RHOHQ15669 191 aa12.8□□□□□ -0.36
LMO2-204ENST00000464025 ZNF56Q15929 161 aa12.8□□□□□ -0.36
LMO2-204ENST00000464025 ZNF124Q15973 351 aa12.8□□□□□ -0.36
LMO2-204ENST00000464025 TMEM141Q96I45 108 aa12.8□□□□□ -0.36
LMO2-204ENST00000464025 CHTOPQ9Y3Y2 248 aaKnown RBP12.8□□□□□ -0.36
LMO2-204ENST00000464025 IGKV2D-26A0A0A0MRZ7 120 aa12.79□□□□□ -0.36
LMO2-204ENST00000464025 IGIPA6NJ69 53 aa12.79□□□□□ -0.36
LMO2-204ENST00000464025 A8MWV9 139 aa12.79□□□□□ -0.36
LMO2-204ENST00000464025 M0R2P5 195 aa12.79□□□□□ -0.36
LMO2-204ENST00000464025 HSD52Q0P140 79 aa12.79□□□□□ -0.36
LMO2-204ENST00000464025 ODF3L2Q3SX64 289 aa12.79□□□□□ -0.36
LMO2-204ENST00000464025 FAM74A4Q5TZK3 123 aa12.79□□□□□ -0.36
LMO2-204ENST00000464025 TIMM17AQ99595 171 aa12.79□□□□□ -0.36
LMO2-204ENST00000464025 SPXQ9BT56 116 aa12.78□□□□□ -0.36
LMO2-204ENST00000464025 INSP01308 110 aa12.77□□□□□ -0.36
LMO2-204ENST00000464025 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.36
LMO2-204ENST00000464025 UFSP1Q6NVU6 142 aa12.77□□□□□ -0.36
LMO2-204ENST00000464025 TAX1BP3O14907 124 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1163.7 ms