RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 JPT2Q9H910 190 aa11.67□□□□□ -0.54
TMEM220-202ENST00000455996 IGHV3OR16-12A0A075B7B8 117 aa11.66□□□□□ -0.54
TMEM220-202ENST00000455996 PRSS47A8MTI9 375 aa11.66□□□□□ -0.54
TMEM220-202ENST00000455996 SMKR1H3BMG3 65 aa11.66□□□□□ -0.54
TMEM220-202ENST00000455996 APOC4P55056 127 aa11.66□□□□□ -0.54
TMEM220-202ENST00000455996 NIT1Q86X76 327 aa11.66□□□□□ -0.54
TMEM220-202ENST00000455996 NRACQ8N912 160 aa11.66□□□□□ -0.54
TMEM220-202ENST00000455996 MDFIQ99750 246 aa11.66□□□□□ -0.54
TMEM220-202ENST00000455996 A8MZ25 164 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 GAS8-AS1O95177 125 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 NCR2O95944 276 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 NPYP01303 97 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 S100A2P29034 98 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 DAZ2Q13117 558 aaKnown RBP11.65□□□□□ -0.54
TMEM220-202ENST00000455996 PDZD11Q5EBL8 140 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 RASL10AQ92737 203 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 CHCHD1Q96BP2 118 aaKnown RBP11.65□□□□□ -0.54
TMEM220-202ENST00000455996 C16orf74Q96GX8 76 aa11.65□□□□□ -0.54
TMEM220-202ENST00000455996 PLAC8L1A1L4L8 177 aa11.64□□□□□ -0.55
TMEM220-202ENST00000455996 TNFRSF6BO95407 300 aa11.64□□□□□ -0.55
TMEM220-202ENST00000455996 IGHV4-30-4P0DP06 118 aa11.64□□□□□ -0.55
TMEM220-202ENST00000455996 TMEM18Q96B42 140 aa11.64□□□□□ -0.55
TMEM220-202ENST00000455996 A8MWV9 139 aa11.63□□□□□ -0.55
TMEM220-202ENST00000455996 LINC00614P0C842 121 aa11.63□□□□□ -0.55
TMEM220-202ENST00000455996 GATA1P15976 413 aaPredicted RBP11.63□□□□□ -0.55
TMEM220-202ENST00000455996 RRN3P1Q2M238 152 aa11.63□□□□□ -0.55
TMEM220-202ENST00000455996 UFSP1Q6NVU6 142 aa11.63□□□□□ -0.55
TMEM220-202ENST00000455996 SAMD10Q9BYL1 202 aa11.63□□□□□ -0.55
TMEM220-202ENST00000455996 DNAH3Q8TD57 4116 aa11.63□□□□□ -0.55
TMEM220-202ENST00000455996 A0A087WWL8 130 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 TRAV26-2A0A0B4J265 109 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 LINC01546A6NGU7 62 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 PPP1R17O96001 155 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 MGPP08493 103 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 FABP4P15090 132 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 LGALS9BQ3B8N2 356 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 OVOL2Q9BRP0 275 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 EDA2RQ9HAV5 297 aa11.62□□□□□ -0.55
TMEM220-202ENST00000455996 RS1O15537 224 aa11.61□□□□□ -0.55
TMEM220-202ENST00000455996 SUMO4Q6EEV6 95 aa11.61□□□□□ -0.55
TMEM220-202ENST00000455996 MAP1LC3AQ9H492 121 aa11.61□□□□□ -0.55
TMEM220-202ENST00000455996 G3V4G9 280 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 AKR1D1P51857 326 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 CFAP126Q5VTH2 177 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 RNASEKQ6P5S7 137 aaKnown RBP11.6□□□□□ -0.55
TMEM220-202ENST00000455996 C20orf78Q9BR46 151 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 X6R8D5 127 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 IGLV2-18A0A075B6J9 118 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 HSBP1O75506 76 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 PMCHP20382 165 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 IFI27P40305 119 aaPredicted RBP11.6□□□□□ -0.55
TMEM220-202ENST00000455996 PRSS3P2Q8NHM4 247 aa11.6□□□□□ -0.55
TMEM220-202ENST00000455996 NXT2Q9NPJ8 142 aaKnown RBP11.6□□□□□ -0.55
TMEM220-202ENST00000455996 MRPL16Q9NX20 251 aaKnown RBP11.6□□□□□ -0.55
TMEM220-202ENST00000455996 RHODO00212 210 aa11.59□□□□□ -0.55
TMEM220-202ENST00000455996 RPL32P62910 135 aaKnown RBP11.59□□□□□ -0.55
TMEM220-202ENST00000455996 ZFP2Q6ZN57 461 aa11.59□□□□□ -0.55
TMEM220-202ENST00000455996 Q6ZWC4 215 aa11.59□□□□□ -0.55
TMEM220-202ENST00000455996 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
TMEM220-202ENST00000455996 Q8N8P6 123 aa11.59□□□□□ -0.55
TMEM220-202ENST00000455996 OR10D4PQ8NGN7 298 aa11.59□□□□□ -0.55
TMEM220-202ENST00000455996 AP5S1Q9NUS5 200 aa11.59□□□□□ -0.55
TMEM220-202ENST00000455996 TRBV6-5A0A0K0K1A5 114 aa11.58□□□□□ -0.56
TMEM220-202ENST00000455996 LOC389332A0A1B0GUA5 103 aa11.58□□□□□ -0.56
TMEM220-202ENST00000455996 M0QY20 66 aa11.58□□□□□ -0.56
TMEM220-202ENST00000455996 FAM74A4Q5TZK3 123 aa11.58□□□□□ -0.56
TMEM220-202ENST00000455996 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.56
TMEM220-202ENST00000455996 TRGV1A0A0A0MS02 117 aa11.57□□□□□ -0.56
TMEM220-202ENST00000455996 AMTP48728 403 aa11.57□□□□□ -0.56
TMEM220-202ENST00000455996 RIPPLY3P57055 190 aa11.57□□□□□ -0.56
TMEM220-202ENST00000455996 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
TMEM220-202ENST00000455996 KPRPQ5T749 579 aaPredicted RBP11.57□□□□□ -0.56
TMEM220-202ENST00000455996 Q6ZTI0 123 aa11.57□□□□□ -0.56
TMEM220-202ENST00000455996 RNF183Q96D59 192 aa11.57□□□□□ -0.56
TMEM220-202ENST00000455996 NOP10Q9NPE3 64 aaKnown RBP11.57□□□□□ -0.56
TMEM220-202ENST00000455996 PKD1L1Q8TDX9 2849 aa11.56□□□□□ -0.56
TMEM220-202ENST00000455996 IGHV1-24A0A0C4DH33 117 aa11.56□□□□□ -0.56
TMEM220-202ENST00000455996 F5H697 171 aa11.56□□□□□ -0.56
TMEM220-202ENST00000455996 ZNF56Q15929 161 aa11.56□□□□□ -0.56
TMEM220-202ENST00000455996 DEFB135Q30KP9 77 aa11.56□□□□□ -0.56
TMEM220-202ENST00000455996 FAM19A2Q8N3H0 131 aa11.56□□□□□ -0.56
TMEM220-202ENST00000455996 SMIM2Q9BVW6 85 aa11.56□□□□□ -0.56
TMEM220-202ENST00000455996 TRAV4A0A0B4J268 109 aa11.55□□□□□ -0.56
TMEM220-202ENST00000455996 CIDEAO60543 219 aa11.55□□□□□ -0.56
TMEM220-202ENST00000455996 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
TMEM220-202ENST00000455996 H7C1H1 209 aa11.54□□□□□ -0.56
TMEM220-202ENST00000455996 K7EMI3 77 aa11.54□□□□□ -0.56
TMEM220-202ENST00000455996 IGHV3-53P01767 116 aa11.54□□□□□ -0.56
TMEM220-202ENST00000455996 POLR2KP53803 58 aaKnown RBP11.54□□□□□ -0.56
TMEM220-202ENST00000455996 C18orf15Q96N68 181 aa11.54□□□□□ -0.56
TMEM220-202ENST00000455996 ST20Q9HBF5 79 aa11.54□□□□□ -0.56
TMEM220-202ENST00000455996 OR4C5Q8NGB2 326 aa11.53□□□□□ -0.56
TMEM220-202ENST00000455996 OR11H2Q8NH07 326 aa11.53□□□□□ -0.56
TMEM220-202ENST00000455996 NIT2Q9NQR4 276 aa11.53□□□□□ -0.56
TMEM220-202ENST00000455996 TP53TG1Q9Y2A0 90 aa11.53□□□□□ -0.56
TMEM220-202ENST00000455996 A0A096LNJ9 63 aa11.52□□□□□ -0.56
TMEM220-202ENST00000455996 SMIM6P0DI80 62 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms