RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TVP23CQ96ET8 276 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 TSSK6Q9BXA6 273 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 OR2D2Q9H210 308 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 SMDT1Q9H4I9 107 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 BANF2Q9H503 90 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 CYTL1Q9NRR1 136 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 ANXA10Q9UJ72 324 aa3.1□□□□□ -1.91
SDCBP-205ENST00000447267 LSM5Q9Y4Y9 91 aaKnown RBP3.1□□□□□ -1.91
SDCBP-205ENST00000447267 IGLV11-55A0A075B6I3 123 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 TRAV9-2A0A087WT02 112 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 TRAV2A0A0B4J234 112 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 IGHV3-66A0A0C4DH42 116 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 LOC107986453A0A1B0GWG9 222 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 A0A1B0GX51 115 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 OR4C45A6NMZ5 311 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 RIIAD1A6NNX1 92 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 C15orf62A8K5M9 175 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 KRTAP4-16G5E9R7 235 aaPredicted RBP3.09□□□□□ -1.91
SDCBP-205ENST00000447267 NDUFA4O00483 81 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 CRYGDP07320 174 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 ZNF688P0C7X2 276 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 EVI2AP22794 236 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 MT1HP80294 61 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 UBE2NLQ5JXB2 153 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 FFAR4Q5NUL3 377 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 BVES-AS1Q5T3Y7 98 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 OR2T5Q6IEZ7 315 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 MRPL54Q6P161 138 aaKnown RBP3.09□□□□□ -1.91
SDCBP-205ENST00000447267 Q8N976 141 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 OR10G7Q8NGN6 311 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 OR2T29Q8NH02 315 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 CMTM2Q8TAZ6 248 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 ABHD14BQ96IU4 210 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 SEC22AQ96IW7 307 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 LINC00477Q96M19 166 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 SPIN2AQ99865 258 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 SPIN2BQ9BPZ2 258 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 PYGO2Q9BRQ0 406 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 AGMATQ9BSE5 352 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 RTBDNQ9BSG5 229 aaPredicted RBP3.09□□□□□ -1.91
SDCBP-205ENST00000447267 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 EIF5A2Q9GZV4 153 aaKnown RBP3.09□□□□□ -1.91
SDCBP-205ENST00000447267 PARLQ9H300 379 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 TMEM242Q9NWH2 141 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 TVP23BQ9NYZ1 205 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 RABAC1Q9UI14 185 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 AK3Q9UIJ7 227 aa3.09□□□□□ -1.91
SDCBP-205ENST00000447267 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.92
SDCBP-205ENST00000447267 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 RBFOX3A6NFN3 312 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 C9JAW5 83 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 E7EUB6 86 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 HSBP1O75506 76 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 KBTBD11O94819 623 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 HBE1P02100 147 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 MRPL3P09001 348 aaKnown RBP3.08□□□□□ -1.92
SDCBP-205ENST00000447267 SLC25A6P12236 298 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 ORM2P19652 201 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 RPL12P30050 165 aaKnown RBP3.08□□□□□ -1.92
SDCBP-205ENST00000447267 RBM11P57052 281 aaKnown RBP3.08□□□□□ -1.92
SDCBP-205ENST00000447267 ADIRFQ15847 76 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 MPV17LQ2QL34 196 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 VWC2Q2TAL6 325 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 LCN15Q6UWW0 184 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 SLC25A42Q86VD7 318 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 OR51G1Q8NGK1 321 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 TMEM101Q96IK0 257 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 SGK494Q96LW2 274 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 AP1S3Q96PC3 154 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 GPER1Q99527 375 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 HSD17B10Q99714 261 aaKnown RBP3.08□□□□□ -1.92
SDCBP-205ENST00000447267 ISG20L2Q9H9L3 353 aaKnown RBP3.08□□□□□ -1.92
SDCBP-205ENST00000447267 ST20Q9HBF5 79 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 SPANXB1Q9NS25 103 aaPredicted RBP3.08□□□□□ -1.92
SDCBP-205ENST00000447267 HIGD1AQ9Y241 93 aa3.08□□□□□ -1.92
SDCBP-205ENST00000447267 A0A096LPF7 62 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 TRBV6-7A0A0A0MS04 114 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 MUC21A0A0G2JKD1 596 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 LOC107984640A0A0U1RRK4 108 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 MUC21A0A140T8X8 626 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 FNDC10F2Z333 226 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 K7EQG2 157 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 PAGE4O60829 102 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 FCGR3BO75015 233 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 APOA2P02652 100 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 MT-ATP8P03928 68 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 SEC11BP0C7V7 166 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 LIMS3P0CW19 117 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 LIMS4P0CW20 117 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 LINC00694P0DN24 101 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 G6PCP35575 357 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 RPS28P62857 69 aaKnown RBP3.07□□□□□ -1.92
SDCBP-205ENST00000447267 GNG5P63218 68 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 PPP1R1AQ13522 171 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 KISS1Q15726 138 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 C4orf26Q17RF5 130 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 RRN3P1Q2M238 152 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 MPV17L2Q567V2 206 aa3.07□□□□□ -1.92
SDCBP-205ENST00000447267 MEIG1Q5JSS6 88 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms