RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 KNCNA6PVL3 124 aa10.15□□□□□ -0.79
RBM39-216ENST00000444878 RNASE1P07998 156 aaKnown RBP10.15□□□□□ -0.79
RBM39-216ENST00000444878 SMIM17P0DL12 118 aa10.15□□□□□ -0.79
RBM39-216ENST00000444878 AMTNQ6UX39 209 aa10.15□□□□□ -0.79
RBM39-216ENST00000444878 C18orf15Q96N68 181 aa10.15□□□□□ -0.79
RBM39-216ENST00000444878 HIVEP2P31629 2446 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 HECTD1Q9ULT8 2610 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 IGHV1OR15-1A0A075B7D0 117 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 CD28P10747 220 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 LAGE3Q14657 143 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 LGALS9BQ3B8N2 356 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 LGALS9CQ6DKI2 356 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 TMEM158Q8WZ71 300 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 GOLT1BQ9Y3E0 138 aa10.14□□□□□ -0.79
RBM39-216ENST00000444878 HLA-DRB4P13762 266 aa10.13□□□□□ -0.79
RBM39-216ENST00000444878 DEFB114Q30KQ6 69 aa10.13□□□□□ -0.79
RBM39-216ENST00000444878 Q8N1Y9 231 aa10.13□□□□□ -0.79
RBM39-216ENST00000444878 RASL10AQ92737 203 aa10.13□□□□□ -0.79
RBM39-216ENST00000444878 HLA-DRB4X5D2U9 266 aa10.13□□□□□ -0.79
RBM39-216ENST00000444878 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
RBM39-216ENST00000444878 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
RBM39-216ENST00000444878 LINC01006Q8NI28 216 aa10.13□□□□□ -0.79
RBM39-216ENST00000444878 ZNF418Q8TF45 676 aaPredicted RBP10.13□□□□□ -0.79
RBM39-216ENST00000444878 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
RBM39-216ENST00000444878 CCL24O00175 119 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 CD300EQ496F6 205 aaPredicted RBP10.12□□□□□ -0.79
RBM39-216ENST00000444878 RPL39LQ96EH5 51 aaKnown RBP10.12□□□□□ -0.79
RBM39-216ENST00000444878 C9orf85Q96MD7 179 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 C20orf78Q9BR46 151 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 H3BMM0 161 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 PPP1R17O96001 155 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 FHL3Q13643 280 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 BATFQ16520 125 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 C16orf95Q9H693 158 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 KIF25-AS1Q9Y6Z4 181 aa10.12□□□□□ -0.79
RBM39-216ENST00000444878 NOTCH2Q04721 2471 aa10.11□□□□□ -0.79
RBM39-216ENST00000444878 GAGE10A6NGK3 116 aa10.11□□□□□ -0.79
RBM39-216ENST00000444878 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
RBM39-216ENST00000444878 NUTF2P61970 127 aaKnown RBP10.11□□□□□ -0.79
RBM39-216ENST00000444878 SYT8Q8NBV8 401 aa10.11□□□□□ -0.79
RBM39-216ENST00000444878 JPT2Q9H910 190 aa10.11□□□□□ -0.79
RBM39-216ENST00000444878 MAP6D1Q9H9H5 199 aa10.11□□□□□ -0.79
RBM39-216ENST00000444878 TSSC4Q9Y5U2 329 aaPredicted RBP10.11□□□□□ -0.79
RBM39-216ENST00000444878 TNFRSF18Q9Y5U5 241 aa10.11□□□□□ -0.79
RBM39-216ENST00000444878 WIPF1O43516 503 aa10.1□□□□□ -0.79
RBM39-216ENST00000444878 MALP21145 153 aa10.1□□□□□ -0.79
RBM39-216ENST00000444878 POM121L12Q8N7R1 296 aa10.1□□□□□ -0.79
RBM39-216ENST00000444878 SPAG8Q99932 426 aaPredicted RBP10.1□□□□□ -0.79
RBM39-216ENST00000444878 MRPS16Q9Y3D3 137 aaKnown RBP10.1□□□□□ -0.79
RBM39-216ENST00000444878 A0A087WWL8 130 aa10.1□□□□□ -0.79
RBM39-216ENST00000444878 A8MTW9 85 aa10.1□□□□□ -0.79
RBM39-216ENST00000444878 NUDT3O95989 172 aa10.1□□□□□ -0.79
RBM39-216ENST00000444878 PRSS1P07477 247 aa10.1□□□□□ -0.79
RBM39-216ENST00000444878 LINC00315P59091 139 aa10.1□□□□□ -0.79
RBM39-216ENST00000444878 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
RBM39-216ENST00000444878 CBY3A6NI87 242 aa10.09□□□□□ -0.79
RBM39-216ENST00000444878 F5H697 171 aa10.09□□□□□ -0.79
RBM39-216ENST00000444878 ATP5LO75964 103 aa10.09□□□□□ -0.79
RBM39-216ENST00000444878 HILS1P60008 231 aa10.09□□□□□ -0.79
RBM39-216ENST00000444878 ORMDL2Q53FV1 153 aa10.09□□□□□ -0.79
RBM39-216ENST00000444878 SLC25A34Q6PIV7 304 aa10.09□□□□□ -0.79
RBM39-216ENST00000444878 SMR3AQ99954 134 aa10.09□□□□□ -0.79
RBM39-216ENST00000444878 RBMY1BA6NDE4 496 aaKnown RBP10.08□□□□□ -0.8
RBM39-216ENST00000444878 RBMY1EA6NEQ0 496 aaKnown RBP10.08□□□□□ -0.8
RBM39-216ENST00000444878 K7EMI3 77 aa10.08□□□□□ -0.8
RBM39-216ENST00000444878 RBMY1DP0C7P1 496 aaKnown RBP10.08□□□□□ -0.8
RBM39-216ENST00000444878 RBMY1A1P0DJD3 496 aaKnown RBP10.08□□□□□ -0.8
RBM39-216ENST00000444878 RBMY1CP0DJD4 496 aa10.08□□□□□ -0.8
RBM39-216ENST00000444878 HTN1P15515 57 aa10.08□□□□□ -0.8
RBM39-216ENST00000444878 RBMY1FQ15415 496 aaKnown RBP10.08□□□□□ -0.8
RBM39-216ENST00000444878 FAM74A4Q5TZK3 123 aa10.08□□□□□ -0.8
RBM39-216ENST00000444878 SUMO4Q6EEV6 95 aa10.08□□□□□ -0.8
RBM39-216ENST00000444878 DKK2Q9UBU2 259 aa10.08□□□□□ -0.8
RBM39-216ENST00000444878 ZNF256Q9Y2P7 627 aaPredicted RBP10.08□□□□□ -0.8
RBM39-216ENST00000444878 GAGE1Q13065 139 aa10.07□□□□□ -0.8
RBM39-216ENST00000444878 TP73-AS1Q9UF72 201 aa10.07□□□□□ -0.8
RBM39-216ENST00000444878 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
RBM39-216ENST00000444878 ZNF876PQ49A33 203 aa10.06□□□□□ -0.8
RBM39-216ENST00000444878 STPG4Q8N801 248 aa10.06□□□□□ -0.8
RBM39-216ENST00000444878 SETXQ7Z333 2677 aaKnown RBP10.06□□□□□ -0.8
RBM39-216ENST00000444878 COX8AP10176 69 aa10.06□□□□□ -0.8
RBM39-216ENST00000444878 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
RBM39-216ENST00000444878 ZNF56Q15929 161 aa10.05□□□□□ -0.8
RBM39-216ENST00000444878 COL5A1-AS1Q5SY13 56 aa10.05□□□□□ -0.8
RBM39-216ENST00000444878 JMJD8Q96S16 334 aa10.05□□□□□ -0.8
RBM39-216ENST00000444878 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.04□□□□□ -0.8
RBM39-216ENST00000444878 CRYGDP07320 174 aa10.04□□□□□ -0.8
RBM39-216ENST00000444878 ODF3L2Q3SX64 289 aa10.04□□□□□ -0.8
RBM39-216ENST00000444878 CDIP1Q9H305 208 aa10.04□□□□□ -0.8
RBM39-216ENST00000444878 NDUFA7O95182 113 aa10.04□□□□□ -0.8
RBM39-216ENST00000444878 LY6G6DO95868 133 aa10.04□□□□□ -0.8
RBM39-216ENST00000444878 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
RBM39-216ENST00000444878 TOMM6Q96B49 74 aa10.04□□□□□ -0.8
RBM39-216ENST00000444878 SCGB3A1Q96QR1 104 aa10.04□□□□□ -0.8
RBM39-216ENST00000444878 NOTCH3Q9UM47 2321 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 IGKCP01834 107 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 TCTAP57738 103 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 NEGR1Q7Z3B1 354 aa10.03□□□□□ -0.8
RBM39-216ENST00000444878 OR11H12B2RN74 326 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms