RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TMSB15BA0A087X1C1 80 aa13.98□□□□□ -0.17
VSX1-206ENST00000444511 G3V3Q6 166 aa13.98□□□□□ -0.17
VSX1-206ENST00000444511 TPT1P13693 172 aaKnown RBP13.98□□□□□ -0.17
VSX1-206ENST00000444511 TCEAL7Q9BRU2 100 aa13.98□□□□□ -0.17
VSX1-206ENST00000444511 CYTL1Q9NRR1 136 aa13.98□□□□□ -0.17
VSX1-206ENST00000444511 M0R381 172 aa13.97□□□□□ -0.17
VSX1-206ENST00000444511 FHITP49789 147 aa13.97□□□□□ -0.17
VSX1-206ENST00000444511 URGCP-MRPS24S4R325 110 aa13.97□□□□□ -0.17
VSX1-206ENST00000444511 A0A087WWL8 130 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 TRBV6-1A0A0K0K1D8 114 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 LTAP01374 205 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 AKR1C3P42330 323 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 WFDC2Q14508 124 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 ZNF674Q2M3X9 581 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 RGS21Q2M5E4 152 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 LINC01559Q495D7 138 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 SFRP2Q96HF1 295 aa13.96□□□□□ -0.17
VSX1-206ENST00000444511 LECT2O14960 151 aa13.95□□□□□ -0.18
VSX1-206ENST00000444511 ZFP82Q8N141 532 aa13.95□□□□□ -0.18
VSX1-206ENST00000444511 FAM30AQ9NZY2 134 aa13.94□□□□□ -0.18
VSX1-206ENST00000444511 COX11Q9Y6N1 276 aa13.94□□□□□ -0.18
VSX1-206ENST00000444511 PAGE4O60829 102 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 C1QBP02746 253 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 SEC11BP0C7V7 166 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 NIT1Q86X76 327 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 RMI2Q96E14 147 aa13.93□□□□□ -0.18
VSX1-206ENST00000444511 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.91□□□□□ -0.18
VSX1-206ENST00000444511 TRBV10-1A0A0K0K1A3 114 aa13.91□□□□□ -0.18
VSX1-206ENST00000444511 SMLR1H3BR10 107 aa13.91□□□□□ -0.18
VSX1-206ENST00000444511 RPL36AP83881 106 aaKnown RBP13.91□□□□□ -0.18
VSX1-206ENST00000444511 SFT2D1Q8WV19 159 aa13.91□□□□□ -0.18
VSX1-206ENST00000444511 BAALCQ8WXS3 180 aa13.91□□□□□ -0.18
VSX1-206ENST00000444511 RPL36ALQ969Q0 106 aaKnown RBP13.91□□□□□ -0.18
VSX1-206ENST00000444511 A0A087WX48 190 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 KCNIP4Q6PIL6 250 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 KCNRGQ8N5I3 272 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 FAM213BQ8TBF2 198 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 KLK12Q9UKR0 248 aa13.9□□□□□ -0.18
VSX1-206ENST00000444511 HERC1Q15751 4861 aa13.9□□□□□ -0.19
VSX1-206ENST00000444511 VPS13BQ7Z7G8 4022 aa13.89□□□□□ -0.19
VSX1-206ENST00000444511 IGKV2D-24A0A075B6R9 120 aa13.89□□□□□ -0.19
VSX1-206ENST00000444511 A0A1B0GV50 99 aa13.89□□□□□ -0.19
VSX1-206ENST00000444511 S100A9P06702 114 aaKnown RBP13.89□□□□□ -0.19
VSX1-206ENST00000444511 DMBT1Q9UGM3 2413 aaPredicted RBP13.88□□□□□ -0.19
VSX1-206ENST00000444511 TRBV7-3A0A075B6L6 115 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 UMAD1C9J7I0 102 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 PFDN1O60925 122 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 ZNF345Q14585 488 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 ELOBQ15370 118 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 MBD3L1Q8WWY6 194 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 UBE2WQ96B02 151 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 CHCHD7Q9BUK0 85 aa13.88□□□□□ -0.19
VSX1-206ENST00000444511 SCO2A0A1W2PP80 73 aa13.87□□□□□ -0.19
VSX1-206ENST00000444511 UBE2D3P61077 147 aa13.87□□□□□ -0.19
VSX1-206ENST00000444511 UBE2D2P62837 147 aa13.87□□□□□ -0.19
VSX1-206ENST00000444511 RPL19P84098 196 aaKnown RBP13.87□□□□□ -0.19
VSX1-206ENST00000444511 DNAJC30Q96LL9 226 aa13.87□□□□□ -0.19
VSX1-206ENST00000444511 ZNF56Q15929 161 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 Q6ZSA8 131 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 BAGE2Q86Y30 109 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 Q8N976 141 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 OR10AG1Q8NH19 301 aa13.86□□□□□ -0.19
VSX1-206ENST00000444511 ZNF471Q9BX82 626 aaPredicted RBP13.86□□□□□ -0.19
VSX1-206ENST00000444511 SRRM2Q9UQ35 2752 aaKnown RBP13.85□□□□□ -0.19
VSX1-206ENST00000444511 RBFOX3A6NFN3 312 aa13.85□□□□□ -0.19
VSX1-206ENST00000444511 CXCL1P09341 107 aa13.85□□□□□ -0.19
VSX1-206ENST00000444511 RAB4BP61018 213 aa13.85□□□□□ -0.19
VSX1-206ENST00000444511 TMEM262E9PQX1 116 aa13.84□□□□□ -0.19
VSX1-206ENST00000444511 OR10G8Q8NGN5 311 aa13.84□□□□□ -0.19
VSX1-206ENST00000444511 MLST8Q9BVC4 326 aa13.84□□□□□ -0.19
VSX1-206ENST00000444511 A0A0D9SG52 128 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 KANTRA0A1W2PQU2 76 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 H2AFB1P0C5Y9 115 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 LINC01620Q4KN68 170 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 SPANXN1Q5VSR9 72 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 PRR27Q6MZM9 219 aa13.83□□□□□ -0.2
VSX1-206ENST00000444511 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.83□□□□□ -0.2
VSX1-206ENST00000444511 TRBV6-8A0A0A6YYG3 113 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 HMSDA8MTL9 139 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 BCL2L11O43521 198 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 PLA2G1BP04054 148 aaKnown RBP13.82□□□□□ -0.2
VSX1-206ENST00000444511 Q0VG73 95 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 NEXN-AS1Q8NBZ9 246 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 MYCBP2O75592 4640 aa13.82□□□□□ -0.2
VSX1-206ENST00000444511 FLG2Q5D862 2391 aaPredicted RBP13.81□□□□□ -0.2
VSX1-206ENST00000444511 MUC21A0A0G2JKD1 596 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 MUC21A0A140T8X8 626 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 SNAI2O43623 268 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
VSX1-206ENST00000444511 TMUB2Q71RG4 321 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 LINC00528Q8N1L1 170 aa13.81□□□□□ -0.2
VSX1-206ENST00000444511 DNAH8Q96JB1 4490 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 F5H697 171 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 OR5AL1P0C617 328 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 SSTP61278 116 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 ATRAIDQ6UW56 229 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 SSBP4Q9BWG4 385 aaPredicted RBP13.8□□□□□ -0.2
VSX1-206ENST00000444511 C1orf43Q9BWL3 253 aa13.8□□□□□ -0.2
VSX1-206ENST00000444511 CRPP02741 224 aa13.79□□□□□ -0.2
VSX1-206ENST00000444511 SMIM17P0DL12 118 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms