RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 TEX29Q8N6K0 151 aa12.25□□□□□ -0.45
PIKFYVE-206ENST00000443896 DEFB1P60022 68 aa12.24□□□□□ -0.45
PIKFYVE-206ENST00000443896 HHLA3Q9XRX5 114 aa12.24□□□□□ -0.45
PIKFYVE-206ENST00000443896 TMEM89A2RUT3 159 aa12.24□□□□□ -0.45
PIKFYVE-206ENST00000443896 RRN3P1Q2M238 152 aa12.24□□□□□ -0.45
PIKFYVE-206ENST00000443896 TRAV21A0A0B4J279 112 aa12.24□□□□□ -0.45
PIKFYVE-206ENST00000443896 ZFAND6Q6FIF0 208 aa12.24□□□□□ -0.45
PIKFYVE-206ENST00000443896 NXT2Q9NPJ8 142 aaKnown RBP12.24□□□□□ -0.45
PIKFYVE-206ENST00000443896 FSHBP01225 129 aa12.23□□□□□ -0.45
PIKFYVE-206ENST00000443896 IGKCP01834 107 aa12.23□□□□□ -0.45
PIKFYVE-206ENST00000443896 APRG1Q8IVJ8 170 aa12.23□□□□□ -0.45
PIKFYVE-206ENST00000443896 DPF1Q92782 380 aa12.23□□□□□ -0.45
PIKFYVE-206ENST00000443896 IGKV3-7A0A075B6H7 116 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 EDN2P20800 178 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 C10orf99Q6UWK7 81 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 CARD19Q96LW7 228 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 F6UB75 175 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 J3KRW8 73 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 LINC01549A6NIU2 74 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 ODF1Q14990 250 aa12.22□□□□□ -0.45
PIKFYVE-206ENST00000443896 IGHV4-31P0DP07 118 aa12.21□□□□□ -0.45
PIKFYVE-206ENST00000443896 MRPL35Q9NZE8 188 aaKnown RBP12.21□□□□□ -0.45
PIKFYVE-206ENST00000443896 UBR5O95071 2799 aaPredicted RBP12.21□□□□□ -0.45
PIKFYVE-206ENST00000443896 NHLRC4P0CG21 123 aaPredicted RBP12.21□□□□□ -0.45
PIKFYVE-206ENST00000443896 VPREB3Q9UKI3 123 aa12.21□□□□□ -0.45
PIKFYVE-206ENST00000443896 ZNF462Q96JM2 2506 aa12.21□□□□□ -0.46
PIKFYVE-206ENST00000443896 CSPG4Q6UVK1 2322 aa12.21□□□□□ -0.46
PIKFYVE-206ENST00000443896 DCANP1Q8TF63 244 aa12.21□□□□□ -0.46
PIKFYVE-206ENST00000443896 DEFB104AQ8WTQ1 72 aa12.21□□□□□ -0.46
PIKFYVE-206ENST00000443896 IGLV2-18A0A075B6J9 118 aa12.2□□□□□ -0.46
PIKFYVE-206ENST00000443896 KRTAP10-9P60411 292 aa12.2□□□□□ -0.46
PIKFYVE-206ENST00000443896 NRACQ8N912 160 aa12.2□□□□□ -0.46
PIKFYVE-206ENST00000443896 HLA-DRB4P13762 266 aa12.2□□□□□ -0.46
PIKFYVE-206ENST00000443896 SRD5A1P18405 259 aa12.2□□□□□ -0.46
PIKFYVE-206ENST00000443896 Q6YL49 198 aa12.2□□□□□ -0.46
PIKFYVE-206ENST00000443896 Q8N8P6 123 aa12.2□□□□□ -0.46
PIKFYVE-206ENST00000443896 HLA-DRB4X5D2U9 266 aa12.2□□□□□ -0.46
PIKFYVE-206ENST00000443896 RNASE4P34096 147 aaKnown RBP12.19□□□□□ -0.46
PIKFYVE-206ENST00000443896 ANKRD17O75179 2603 aaKnown RBP12.19□□□□□ -0.46
PIKFYVE-206ENST00000443896 HOXA3O43365 443 aaPredicted RBP12.19□□□□□ -0.46
PIKFYVE-206ENST00000443896 CFAP126Q5VTH2 177 aa12.19□□□□□ -0.46
PIKFYVE-206ENST00000443896 TMEM158Q8WZ71 300 aa12.19□□□□□ -0.46
PIKFYVE-206ENST00000443896 BEX4Q9NWD9 120 aaPredicted RBP12.19□□□□□ -0.46
PIKFYVE-206ENST00000443896 CRLF1O75462 422 aa12.18□□□□□ -0.46
PIKFYVE-206ENST00000443896 MED14OSP0DP75 135 aa12.18□□□□□ -0.46
PIKFYVE-206ENST00000443896 ASIPP42127 132 aa12.18□□□□□ -0.46
PIKFYVE-206ENST00000443896 MORN3Q6PF18 240 aaPredicted RBP12.18□□□□□ -0.46
PIKFYVE-206ENST00000443896 TRAV26-2A0A0B4J265 109 aa12.18□□□□□ -0.46
PIKFYVE-206ENST00000443896 CITED1Q99966 193 aa12.18□□□□□ -0.46
PIKFYVE-206ENST00000443896 ZFYVE26Q68DK2 2539 aa12.17□□□□□ -0.46
PIKFYVE-206ENST00000443896 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
PIKFYVE-206ENST00000443896 MYOZ3Q8TDC0 251 aa12.17□□□□□ -0.46
PIKFYVE-206ENST00000443896 DEFB113Q30KQ7 82 aa12.17□□□□□ -0.46
PIKFYVE-206ENST00000443896 ZNF702PQ9H963 129 aa12.17□□□□□ -0.46
PIKFYVE-206ENST00000443896 KLLNB2CW77 178 aa12.17□□□□□ -0.46
PIKFYVE-206ENST00000443896 S100A4P26447 101 aaKnown RBP12.17□□□□□ -0.46
PIKFYVE-206ENST00000443896 DPM2O94777 84 aa12.16□□□□□ -0.46
PIKFYVE-206ENST00000443896 SRSF9Q13242 221 aaKnown RBP eCLIP12.16□□□□□ -0.46
PIKFYVE-206ENST00000443896 FAM159AQ6UWV7 190 aa12.16□□□□□ -0.46
PIKFYVE-206ENST00000443896 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
PIKFYVE-206ENST00000443896 HIGD1BQ9P298 99 aa12.16□□□□□ -0.46
PIKFYVE-206ENST00000443896 CR1P17927 2039 aa12.16□□□□□ -0.46
PIKFYVE-206ENST00000443896 H7C2G1 150 aa12.16□□□□□ -0.46
PIKFYVE-206ENST00000443896 DLX4Q92988 240 aaPredicted RBP12.16□□□□□ -0.46
PIKFYVE-206ENST00000443896 M0R381 172 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 ELANEP08246 267 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 LGALS1P09382 135 aaKnown RBP12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 TTC32Q5I0X7 151 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 PHLDA3Q9Y5J5 127 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 GAGE7O76087 117 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 GAGE12FP0CL80 117 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 GAGE12GP0CL81 117 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 GAGE12IP0CL82 117 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 GAGE4Q13068 117 aa12.15□□□□□ -0.46
PIKFYVE-206ENST00000443896 FAM208BQ5VWN6 2430 aa12.15□□□□□ -0.47
PIKFYVE-206ENST00000443896 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 FAM110AQ9BQ89 295 aa12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 USP9YO00507 2555 aaPredicted RBP12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 GNRH2O43555 120 aa12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 SCGB1C2P0DMR2 95 aa12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 GAGE2BQ13066 116 aa12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 GAGE2EQ4V326 116 aa12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 PPDPFQ9H3Y8 114 aa12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 GAGE2DQ9UEU5 116 aa12.14□□□□□ -0.47
PIKFYVE-206ENST00000443896 LGALS9O00182 355 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 SPRY2O43597 315 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 ANKRD29Q8N6D5 301 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 DPH3P1Q9H4G8 78 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 ZANQ9Y493 2812 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 RNF152Q8N8N0 203 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 LAGE3Q14657 143 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 SCGB1D4Q6XE38 83 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 UBE2E2Q96LR5 201 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 LRRK2Q5S007 2527 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 POLQO75417 2590 aa12.13□□□□□ -0.47
PIKFYVE-206ENST00000443896 NDUFV3P56181 108 aaKnown RBP12.12□□□□□ -0.47
PIKFYVE-206ENST00000443896 IGHV4OR15-8A0A075B7B6 117 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms