RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 FXYD6-FXYD2A0A087WZ82 144 aa13.71□□□□□ -0.21
CPNE1-219ENST00000440240 M0R036 132 aa13.71□□□□□ -0.21
CPNE1-219ENST00000440240 LECT2O14960 151 aa13.71□□□□□ -0.21
CPNE1-219ENST00000440240 PLA2G1BP04054 148 aaKnown RBP13.71□□□□□ -0.21
CPNE1-219ENST00000440240 FAM162BQ5T6X4 162 aa13.71□□□□□ -0.21
CPNE1-219ENST00000440240 Q6ZSA8 131 aa13.71□□□□□ -0.21
CPNE1-219ENST00000440240 ZC2HC1AQ96GY0 325 aa13.71□□□□□ -0.21
CPNE1-219ENST00000440240 PHLDA3Q9Y5J5 127 aa13.71□□□□□ -0.21
CPNE1-219ENST00000440240 SH2D1AO60880 128 aa13.7□□□□□ -0.22
CPNE1-219ENST00000440240 UBE2G1P62253 170 aa13.7□□□□□ -0.22
CPNE1-219ENST00000440240 FAM74A4Q5TZK3 123 aa13.7□□□□□ -0.22
CPNE1-219ENST00000440240 SFRP2Q96HF1 295 aa13.7□□□□□ -0.22
CPNE1-219ENST00000440240 FMC1Q96HJ9 113 aa13.7□□□□□ -0.22
CPNE1-219ENST00000440240 GRIFINA4D1Z8 144 aa13.69□□□□□ -0.22
CPNE1-219ENST00000440240 TPT1P13693 172 aaKnown RBP13.69□□□□□ -0.22
CPNE1-219ENST00000440240 NIT1Q86X76 327 aa13.69□□□□□ -0.22
CPNE1-219ENST00000440240 Q8N976 141 aa13.69□□□□□ -0.22
CPNE1-219ENST00000440240 BAALCQ8WXS3 180 aa13.69□□□□□ -0.22
CPNE1-219ENST00000440240 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.68□□□□□ -0.22
CPNE1-219ENST00000440240 TCEAL7Q9BRU2 100 aa13.68□□□□□ -0.22
CPNE1-219ENST00000440240 A0A087WWL8 130 aa13.67□□□□□ -0.22
CPNE1-219ENST00000440240 TRBV10-1A0A0K0K1A3 114 aa13.67□□□□□ -0.22
CPNE1-219ENST00000440240 TRBV6-1A0A0K0K1D8 114 aa13.67□□□□□ -0.22
CPNE1-219ENST00000440240 ELOBQ15370 118 aa13.67□□□□□ -0.22
CPNE1-219ENST00000440240 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
CPNE1-219ENST00000440240 STOML3Q8TAV4 291 aa13.67□□□□□ -0.22
CPNE1-219ENST00000440240 CHCHD7Q9BUK0 85 aa13.67□□□□□ -0.22
CPNE1-219ENST00000440240 A0A087WX48 190 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 MAP1LC3B2A6NCE7 125 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 J3QL48 77 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 M0R381 172 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 FHITP49789 147 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 RPL36AP83881 106 aaKnown RBP13.66□□□□□ -0.22
CPNE1-219ENST00000440240 LINC01559Q495D7 138 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 KCNIP4Q6PIL6 250 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 ZFP82Q8N141 532 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 RPL36ALQ969Q0 106 aaKnown RBP13.66□□□□□ -0.22
CPNE1-219ENST00000440240 MAP1LC3BQ9GZQ8 125 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 KLK12Q9UKR0 248 aa13.66□□□□□ -0.22
CPNE1-219ENST00000440240 IGKV2D-24A0A075B6R9 120 aa13.65□□□□□ -0.22
CPNE1-219ENST00000440240 RBFOX3A6NFN3 312 aa13.65□□□□□ -0.22
CPNE1-219ENST00000440240 CST9LP1Q5W188 147 aa13.65□□□□□ -0.22
CPNE1-219ENST00000440240 TMSB15BA0A087X1C1 80 aa13.64□□□□□ -0.23
CPNE1-219ENST00000440240 LTAP01374 205 aa13.64□□□□□ -0.23
CPNE1-219ENST00000440240 LINC00528Q8N1L1 170 aa13.64□□□□□ -0.23
CPNE1-219ENST00000440240 TRBV7-3A0A075B6L6 115 aa13.63□□□□□ -0.23
CPNE1-219ENST00000440240 UBE2WQ96B02 151 aa13.63□□□□□ -0.23
CPNE1-219ENST00000440240 UBE2D3P61077 147 aa13.62□□□□□ -0.23
CPNE1-219ENST00000440240 UBE2D2P62837 147 aa13.62□□□□□ -0.23
CPNE1-219ENST00000440240 Q0VG73 95 aa13.62□□□□□ -0.23
CPNE1-219ENST00000440240 DEFB104AQ8WTQ1 72 aa13.62□□□□□ -0.23
CPNE1-219ENST00000440240 AKR1C3P42330 323 aa13.61□□□□□ -0.23
CPNE1-219ENST00000440240 LINC01620Q4KN68 170 aa13.61□□□□□ -0.23
CPNE1-219ENST00000440240 ATRAIDQ6UW56 229 aa13.61□□□□□ -0.23
CPNE1-219ENST00000440240 DNAJC30Q96LL9 226 aa13.61□□□□□ -0.23
CPNE1-219ENST00000440240 CYTL1Q9NRR1 136 aa13.61□□□□□ -0.23
CPNE1-219ENST00000440240 TMEM262E9PQX1 116 aa13.6□□□□□ -0.23
CPNE1-219ENST00000440240 ARPC5O15511 151 aa13.6□□□□□ -0.23
CPNE1-219ENST00000440240 S100A9P06702 114 aaKnown RBP13.6□□□□□ -0.23
CPNE1-219ENST00000440240 OR10G8Q8NGN5 311 aa13.6□□□□□ -0.23
CPNE1-219ENST00000440240 RAB4BP61018 213 aa13.59□□□□□ -0.23
CPNE1-219ENST00000440240 SCXQ7RTU7 201 aa13.59□□□□□ -0.23
CPNE1-219ENST00000440240 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
CPNE1-219ENST00000440240 TRBV6-8A0A0A6YYG3 113 aa13.58□□□□□ -0.24
CPNE1-219ENST00000440240 G3V3Q6 166 aa13.58□□□□□ -0.24
CPNE1-219ENST00000440240 PAGE4O60829 102 aa13.58□□□□□ -0.24
CPNE1-219ENST00000440240 C14orf177Q52M58 125 aa13.58□□□□□ -0.24
CPNE1-219ENST00000440240 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-219ENST00000440240 KRTAP29-1A8MX34 341 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-219ENST00000440240 C1orf43Q9BWL3 253 aa13.57□□□□□ -0.24
CPNE1-219ENST00000440240 CXCL1P09341 107 aa13.56□□□□□ -0.24
CPNE1-219ENST00000440240 SFT2D1Q8WV19 159 aa13.56□□□□□ -0.24
CPNE1-219ENST00000440240 ZNF471Q9BX82 626 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-219ENST00000440240 UMAD1C9J7I0 102 aa13.55□□□□□ -0.24
CPNE1-219ENST00000440240 ZNF56Q15929 161 aa13.55□□□□□ -0.24
CPNE1-219ENST00000440240 PRR27Q6MZM9 219 aa13.55□□□□□ -0.24
CPNE1-219ENST00000440240 OR10AG1Q8NH19 301 aa13.55□□□□□ -0.24
CPNE1-219ENST00000440240 MBD3L1Q8WWY6 194 aa13.55□□□□□ -0.24
CPNE1-219ENST00000440240 CRPP02741 224 aa13.54□□□□□ -0.24
CPNE1-219ENST00000440240 PKIAP61925 76 aa13.54□□□□□ -0.24
CPNE1-219ENST00000440240 ENHOQ6UWT2 76 aa13.54□□□□□ -0.24
CPNE1-219ENST00000440240 BAGE2Q86Y30 109 aa13.54□□□□□ -0.24
CPNE1-219ENST00000440240 NEXN-AS1Q8NBZ9 246 aa13.54□□□□□ -0.24
CPNE1-219ENST00000440240 MLST8Q9BVC4 326 aa13.54□□□□□ -0.24
CPNE1-219ENST00000440240 SSBP4Q9BWG4 385 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-219ENST00000440240 PFDN1O60925 122 aa13.53□□□□□ -0.24
CPNE1-219ENST00000440240 SPANXN1Q5VSR9 72 aa13.53□□□□□ -0.24
CPNE1-219ENST00000440240 C15orf54Q8N8G6 183 aa13.53□□□□□ -0.24
CPNE1-219ENST00000440240 CIRBP-AS1Q8TBR5 109 aa13.53□□□□□ -0.24
CPNE1-219ENST00000440240 SNAI2O43623 268 aa13.52□□□□□ -0.25
CPNE1-219ENST00000440240 OR5AL1P0C617 328 aa13.52□□□□□ -0.25
CPNE1-219ENST00000440240 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
CPNE1-219ENST00000440240 TMEM97Q5BJF2 176 aa13.52□□□□□ -0.25
CPNE1-219ENST00000440240 KCNRGQ8N5I3 272 aa13.52□□□□□ -0.25
CPNE1-219ENST00000440240 FAM213BQ8TBF2 198 aa13.52□□□□□ -0.25
CPNE1-219ENST00000440240 F5H697 171 aa13.51□□□□□ -0.25
CPNE1-219ENST00000440240 ANGP03950 147 aaKnown RBP13.51□□□□□ -0.25
CPNE1-219ENST00000440240 ZNF345Q14585 488 aa13.51□□□□□ -0.25
CPNE1-219ENST00000440240 RGS21Q2M5E4 152 aa13.51□□□□□ -0.25
CPNE1-219ENST00000440240 MPV17L2Q567V2 206 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms