RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 SNAI2O43623 268 aa16.09■□□□□ 0.17
VARS-217ENST00000440048 LINC00315P59091 139 aa16.09■□□□□ 0.17
VARS-217ENST00000440048 Q9UF83 564 aa16.09■□□□□ 0.17
VARS-217ENST00000440048 LY96Q9Y6Y9 160 aa16.09■□□□□ 0.17
VARS-217ENST00000440048 DNAH11Q96DT5 4516 aa16.08■□□□□ 0.17
VARS-217ENST00000440048 C19orf71A6NCJ1 209 aa16.08■□□□□ 0.16
VARS-217ENST00000440048 OR5AL1P0C617 328 aa16.08■□□□□ 0.16
VARS-217ENST00000440048 ATP6V0E2Q8NHE4 81 aa16.08■□□□□ 0.16
VARS-217ENST00000440048 DAZAP1Q96EP5 407 aaKnown RBP16.08■□□□□ 0.16
VARS-217ENST00000440048 GAGE12JA6NER3 117 aa16.07■□□□□ 0.16
VARS-217ENST00000440048 RBFOX3A6NFN3 312 aa16.07■□□□□ 0.16
VARS-217ENST00000440048 DNAH10OSP0CZ25 163 aa16.07■□□□□ 0.16
VARS-217ENST00000440048 LINC00694P0DN24 101 aa16.07■□□□□ 0.16
VARS-217ENST00000440048 GAGE1Q13065 139 aa16.07■□□□□ 0.16
VARS-217ENST00000440048 GAGE4Q13068 117 aa16.07■□□□□ 0.16
VARS-217ENST00000440048 GAGE5Q13069 117 aa16.07■□□□□ 0.16
VARS-217ENST00000440048 GAGE13Q4V321 117 aa16.07■□□□□ 0.16
VARS-217ENST00000440048 TRAV9-2A0A087WT02 112 aa16.06■□□□□ 0.16
VARS-217ENST00000440048 MUC21A0A0G2JKD1 596 aa16.06■□□□□ 0.16
VARS-217ENST00000440048 MUC21A0A140T8X8 626 aa16.06■□□□□ 0.16
VARS-217ENST00000440048 OR2D3Q8NGH3 330 aa16.06■□□□□ 0.16
VARS-217ENST00000440048 GTSF1LQ9H1H1 148 aa16.06■□□□□ 0.16
VARS-217ENST00000440048 DYNC1H1Q14204 4646 aaKnown RBP16.06■□□□□ 0.16
VARS-217ENST00000440048 GZMBP10144 247 aa16.05■□□□□ 0.16
VARS-217ENST00000440048 EVI2AP22794 236 aa16.05■□□□□ 0.16
VARS-217ENST00000440048 SPANXN1Q5VSR9 72 aa16.05■□□□□ 0.16
VARS-217ENST00000440048 RPS20P60866 119 aaKnown RBP16.04■□□□□ 0.16
VARS-217ENST00000440048 LELP1Q5T871 98 aa16.04■□□□□ 0.16
VARS-217ENST00000440048 BIN3Q9NQY0 253 aa16.04■□□□□ 0.16
VARS-217ENST00000440048 TNFRSF18Q9Y5U5 241 aa16.04■□□□□ 0.16
VARS-217ENST00000440048 HERC2O95714 4834 aa16.04■□□□□ 0.16
VARS-217ENST00000440048 TRAV8-6A0A0B4J262 113 aa16.03■□□□□ 0.16
VARS-217ENST00000440048 IGHV3-38A0A0C4DH36 116 aa16.03■□□□□ 0.16
VARS-217ENST00000440048 K7EP13 123 aa16.03■□□□□ 0.16
VARS-217ENST00000440048 P01737 135 aa16.03■□□□□ 0.16
VARS-217ENST00000440048 OR10J3Q5JRS4 329 aa16.03■□□□□ 0.16
VARS-217ENST00000440048 Q6ZRN7 208 aaPredicted RBP16.03■□□□□ 0.16
VARS-217ENST00000440048 TMEM250H0YL14 139 aa16.02■□□□□ 0.16
VARS-217ENST00000440048 IGLC6P0CF74 106 aa16.02■□□□□ 0.16
VARS-217ENST00000440048 SSTP61278 116 aa16.02■□□□□ 0.16
VARS-217ENST00000440048 KIAA1109Q2LD37 5005 aa16.01■□□□□ 0.15
VARS-217ENST00000440048 FER1L6-AS1Q8NA97 138 aa16.01■□□□□ 0.15
VARS-217ENST00000440048 OCC1Q8TAD7 63 aa16.01■□□□□ 0.15
VARS-217ENST00000440048 LINC01556Q5JQF7 62 aa16■□□□□ 0.15
VARS-217ENST00000440048 TOR2AQ5JU69 321 aa16■□□□□ 0.15
VARS-217ENST00000440048 TPPP3Q9BW30 176 aa16■□□□□ 0.15
VARS-217ENST00000440048 XKRY2A2RUG3 117 aa15.99■□□□□ 0.15
VARS-217ENST00000440048 K7EN84 100 aa15.99■□□□□ 0.15
VARS-217ENST00000440048 RAB4BP61018 213 aa15.99■□□□□ 0.15
VARS-217ENST00000440048 NUDT10Q8NFP7 164 aa15.99■□□□□ 0.15
VARS-217ENST00000440048 NUDT11Q96G61 164 aa15.99■□□□□ 0.15
VARS-217ENST00000440048 MSRB1Q9NZV6 116 aa15.99■□□□□ 0.15
VARS-217ENST00000440048 TRBV10-1A0A0K0K1A3 114 aa15.98■□□□□ 0.15
VARS-217ENST00000440048 ZNF56Q15929 161 aa15.98■□□□□ 0.15
VARS-217ENST00000440048 NFE4Q86UQ8 179 aa15.98■□□□□ 0.15
VARS-217ENST00000440048 C10orf126Q8N4M7 172 aa15.98■□□□□ 0.15
VARS-217ENST00000440048 EIF5A2Q9GZV4 153 aaKnown RBP15.98■□□□□ 0.15
VARS-217ENST00000440048 FAM210AQ96ND0 272 aa15.97■□□□□ 0.15
VARS-217ENST00000440048 RNASE7Q9H1E1 156 aaKnown RBP15.97■□□□□ 0.15
VARS-217ENST00000440048 CEBPGP53567 150 aa15.96■□□□□ 0.15
VARS-217ENST00000440048 RPL36AP83881 106 aaKnown RBP15.96■□□□□ 0.15
VARS-217ENST00000440048 RPL36ALQ969Q0 106 aaKnown RBP15.96■□□□□ 0.15
VARS-217ENST00000440048 AP1S3Q96PC3 154 aa15.96■□□□□ 0.15
VARS-217ENST00000440048 KIF25-AS1Q9Y6Z4 181 aa15.96■□□□□ 0.15
VARS-217ENST00000440048 A0A087WWC5 75 aa15.95■□□□□ 0.14
VARS-217ENST00000440048 IGHV3-30P01768 117 aa15.95■□□□□ 0.14
VARS-217ENST00000440048 IGHV3-33P01772 117 aa15.95■□□□□ 0.14
VARS-217ENST00000440048 IGHV3-30-3P0DP02 117 aa15.95■□□□□ 0.14
VARS-217ENST00000440048 IGHV3-30-5P0DP03 117 aa15.95■□□□□ 0.14
VARS-217ENST00000440048 CACNG7P62955 275 aa15.95■□□□□ 0.14
VARS-217ENST00000440048 TRBV7-3A0A075B6L6 115 aa15.94■□□□□ 0.14
VARS-217ENST00000440048 F2Z2F3 143 aa15.94■□□□□ 0.14
VARS-217ENST00000440048 F5H697 171 aa15.94■□□□□ 0.14
VARS-217ENST00000440048 NDUFS6O75380 124 aaKnown RBP15.94■□□□□ 0.14
VARS-217ENST00000440048 SMIM17P0DL12 118 aa15.94■□□□□ 0.14
VARS-217ENST00000440048 UBE2D3P61077 147 aa15.94■□□□□ 0.14
VARS-217ENST00000440048 UBE2D2P62837 147 aa15.94■□□□□ 0.14
VARS-217ENST00000440048 LYZL1Q6UWQ5 148 aa15.94■□□□□ 0.14
VARS-217ENST00000440048 OR10G8Q8NGN5 311 aa15.94■□□□□ 0.14
VARS-217ENST00000440048 RPP21Q9H633 154 aaKnown RBP15.94■□□□□ 0.14
VARS-217ENST00000440048 NEXN-AS1Q8NBZ9 246 aa15.93■□□□□ 0.14
VARS-217ENST00000440048 IBA57-AS1B1ANH7 110 aa15.92■□□□□ 0.14
VARS-217ENST00000440048 TEX261Q6UWH6 196 aa15.92■□□□□ 0.14
VARS-217ENST00000440048 SPATA12Q7Z6I5 190 aa15.92■□□□□ 0.14
VARS-217ENST00000440048 C16orf90A8MZG2 172 aa15.91■□□□□ 0.14
VARS-217ENST00000440048 SRP19P09132 144 aaKnown RBP15.91■□□□□ 0.14
VARS-217ENST00000440048 Q8N3U1 123 aa15.91■□□□□ 0.14
VARS-217ENST00000440048 CTRLP40313 264 aa15.9■□□□□ 0.14
VARS-217ENST00000440048 SMIM7Q9BQ49 75 aa15.9■□□□□ 0.14
VARS-217ENST00000440048 MGPP08493 103 aa15.89■□□□□ 0.13
VARS-217ENST00000440048 NTF3P20783 257 aa15.89■□□□□ 0.13
VARS-217ENST00000440048 KRTAP10-2P60368 255 aa15.89■□□□□ 0.13
VARS-217ENST00000440048 WDR73Q6P4I2 378 aa15.89■□□□□ 0.13
VARS-217ENST00000440048 GATCO43716 136 aaKnown RBP15.88■□□□□ 0.13
VARS-217ENST00000440048 ERVFC1-1P60608 527 aa15.88■□□□□ 0.13
VARS-217ENST00000440048 FAM231DQ6ZW35 169 aa15.88■□□□□ 0.13
VARS-217ENST00000440048 ZNF727A8MUV8 499 aa15.87■□□□□ 0.13
VARS-217ENST00000440048 TRGC1P0CF51 173 aa15.87■□□□□ 0.13
VARS-217ENST00000440048 CNFNQ9BYD5 112 aa15.87■□□□□ 0.13
VARS-217ENST00000440048 Q9HAA7 133 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms