RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.15□□□□□ -1.26
MCF2L-216ENST00000439475 OR2D3Q8NGH3 330 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 SSBP4Q9BWG4 385 aaPredicted RBP7.15□□□□□ -1.26
MCF2L-216ENST00000439475 SAMD10Q9BYL1 202 aa7.15□□□□□ -1.26
MCF2L-216ENST00000439475 A0A087WWC5 75 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 TRBV10-1A0A0K0K1A3 114 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 RBFOX3A6NFN3 312 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 EREGO14944 169 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 SNAI2O43623 268 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 P01737 135 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 CRYGDP07320 174 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 DNAH10OSP0CZ25 163 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 LINC00315P59091 139 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 RPL36AP83881 106 aaKnown RBP7.14□□□□□ -1.27
MCF2L-216ENST00000439475 ZNF575Q86XF7 245 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 WFDC10BQ8IUB3 73 aa7.14□□□□□ -1.27
MCF2L-216ENST00000439475 RPL36ALQ969Q0 106 aaKnown RBP7.14□□□□□ -1.27
MCF2L-216ENST00000439475 A0A087WWL8 130 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 A0A1B0GVG6 124 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 TMEM250H0YL14 139 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 IGLV2-8P01709 118 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 NKX2-5P52952 324 aaPredicted RBP7.13□□□□□ -1.27
MCF2L-216ENST00000439475 RAB4BP61018 213 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 CACNG7P62955 275 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 UFSP1Q6NVU6 142 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 Q6ZSN1 163 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 C14orf178Q8N769 122 aaPredicted RBP7.13□□□□□ -1.27
MCF2L-216ENST00000439475 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
MCF2L-216ENST00000439475 BIRC6Q9NR09 4857 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 C19orf71A6NCJ1 209 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 F2Z2F3 143 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 F5H697 171 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 SSTP61278 116 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 ZNF56Q15929 161 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 LINC01556Q5JQF7 62 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 FER1L6-AS1Q8NA97 138 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 OR10AG1Q8NH19 301 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 LYPD6BQ8NI32 183 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 TPPP3Q9BW30 176 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 EIF5A2Q9GZV4 153 aaKnown RBP7.12□□□□□ -1.27
MCF2L-216ENST00000439475 MSRB1Q9NZV6 116 aa7.12□□□□□ -1.27
MCF2L-216ENST00000439475 DNAH17Q9UFH2 4485 aa7.11□□□□□ -1.27
MCF2L-216ENST00000439475 TRBV7-3A0A075B6L6 115 aa7.11□□□□□ -1.27
MCF2L-216ENST00000439475 NDUFS6O75380 124 aaKnown RBP7.11□□□□□ -1.27
MCF2L-216ENST00000439475 KCNIP4Q6PIL6 250 aa7.11□□□□□ -1.27
MCF2L-216ENST00000439475 NUDT10Q8NFP7 164 aa7.11□□□□□ -1.27
MCF2L-216ENST00000439475 NUDT11Q96G61 164 aa7.11□□□□□ -1.27
MCF2L-216ENST00000439475 AP1S3Q96PC3 154 aa7.11□□□□□ -1.27
MCF2L-216ENST00000439475 DNAH2Q9P225 4427 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 MUC21A0A0G2JKD1 596 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 MUC21A0A140T8X8 626 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 IBA57-AS1B1ANH7 110 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 TRGC1P0CF51 173 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 CEBPGP53567 150 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 ERVFC1-1P60608 527 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 TOR2AQ5JU69 321 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 OCC1Q8TAD7 63 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 URGCP-MRPS24S4R325 110 aa7.1□□□□□ -1.27
MCF2L-216ENST00000439475 TRBV20OR9-2A0A075B6H5 130 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 H7C1H1 209 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 PSCAO43653 123 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 IGHV3-30P01768 117 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 IGHV3-33P01772 117 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 IGLC6P0CF74 106 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 LINC00694P0DN24 101 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 IGHV3-30-3P0DP02 117 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 IGHV3-30-5P0DP03 117 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 GZMBP10144 247 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 TMEM97Q5BJF2 176 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 WDR73Q6P4I2 378 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 SPATA12Q7Z6I5 190 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 OR10G8Q8NGN5 311 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 FAM210AQ96ND0 272 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 TNFRSF18Q9Y5U5 241 aa7.09□□□□□ -1.27
MCF2L-216ENST00000439475 GATCO43716 136 aaKnown RBP7.08□□□□□ -1.28
MCF2L-216ENST00000439475 UBE2D3P61077 147 aa7.08□□□□□ -1.28
MCF2L-216ENST00000439475 UBE2D2P62837 147 aa7.08□□□□□ -1.28
MCF2L-216ENST00000439475 ELOBQ15370 118 aa7.08□□□□□ -1.28
MCF2L-216ENST00000439475 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
MCF2L-216ENST00000439475 TM2D2Q9BX73 214 aa7.08□□□□□ -1.28
MCF2L-216ENST00000439475 RPP21Q9H633 154 aaKnown RBP7.08□□□□□ -1.28
MCF2L-216ENST00000439475 PGPEP1Q9NXJ5 209 aa7.08□□□□□ -1.28
MCF2L-216ENST00000439475 A0A087WX48 190 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 TRAV8-3A0A0A6YYJ7 113 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 ZNF727A8MUV8 499 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 A8MWL6 223 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 MGPP08493 103 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 NTF3P20783 257 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 LAGE3Q14657 143 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 Q6ZRN7 208 aaPredicted RBP7.07□□□□□ -1.28
MCF2L-216ENST00000439475 SMIM15Q7Z3B0 74 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 DNAJC30Q96LL9 226 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 CHCHD7Q9BUK0 85 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 RNASE7Q9H1E1 156 aaKnown RBP7.07□□□□□ -1.28
MCF2L-216ENST00000439475 Q9UF83 564 aa7.07□□□□□ -1.28
MCF2L-216ENST00000439475 TMEM262E9PQX1 116 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 PKIAP61925 76 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 PEA15Q15121 130 aa7.06□□□□□ -1.28
MCF2L-216ENST00000439475 TWIST1Q15672 202 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms