RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 MIXL1Q9H2W2 232 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 PROK2Q9HC23 129 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 KLK9Q9UKQ9 250 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
VPS41-207ENST00000439468 A0A087WX48 190 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 TRAV12-1A0A0B4J245 112 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 TMEM210A6NLX4 147 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 HMGB3O15347 200 aaKnown RBP0.87□□□□□ -2.27
VPS41-207ENST00000439468 GADD45GO95257 159 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 CNBPP62633 177 aaKnown RBP0.87□□□□□ -2.27
VPS41-207ENST00000439468 DYNLT1P63172 113 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 HAMPP81172 84 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 ESRGQ1W209 222 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 SOSTDC1Q6X4U4 206 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 Q8IYB0 196 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 CLECL1Q8IZS7 167 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 FAM172AQ8WUF8 416 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 BTF3L4Q96K17 158 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 NMNAT1Q9HAN9 279 aaPredicted RBP0.87□□□□□ -2.27
VPS41-207ENST00000439468 BCL2L10Q9HD36 194 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 OPTCQ9UBM4 332 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 ZFP30Q9Y2G7 519 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 ARL2BPQ9Y2Y0 163 aa0.87□□□□□ -2.27
VPS41-207ENST00000439468 J3QRK9 145 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 M0R2N4 97 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 HYPMO75409 117 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 CRHP06850 196 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 FAM19A2Q8N3H0 131 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 SLC30A7Q8NEW0 376 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 OR11H6Q8NGC7 330 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 OR10X1Q8NGY0 326 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 OR2T10Q8NGZ9 312 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 GNPDA2Q8TDQ7 276 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 DEFB104AQ8WTQ1 72 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 TSLPQ969D9 159 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 PRADC1Q9BSG0 188 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 KRTAP2-1Q9BYU5 128 aa0.86□□□□□ -2.27
VPS41-207ENST00000439468 MDN1Q9NU22 5596 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 C7orf71A4D174 169 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 CCDC160A6NGH7 325 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 CST8O60676 142 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 ATP5HO75947 161 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 PROSCO94903 275 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 EIF5AP63241 154 aaKnown RBP0.85□□□□□ -2.27
VPS41-207ENST00000439468 SPRNQ5BIV9 151 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 C1orf137Q5JT78 98 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 LYRM7Q5U5X0 104 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 GOLT1AQ6ZVE7 132 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 PDZD9Q8IXQ8 264 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 CHMP6Q96FZ7 201 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 PHB2Q99623 299 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 C6orf62Q9GZU0 229 aaPredicted RBP0.85□□□□□ -2.27
VPS41-207ENST00000439468 RNF122Q9H9V4 155 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 CDC42SE1Q9NRR8 79 aa0.85□□□□□ -2.27
VPS41-207ENST00000439468 LOC110117498A0A087WWA1 95 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 ATP6V1G2-DDX39BF2Z307 99 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 TIMM17BO60830 172 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 IGF2P01344 180 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 PRB3Q04118 309 aaPredicted RBP0.84□□□□□ -2.27
VPS41-207ENST00000439468 KRR1Q13601 381 aaKnown RBP0.84□□□□□ -2.27
VPS41-207ENST00000439468 TEX261Q6UWH6 196 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 ACER3Q9NUN7 267 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 ARMC1Q9NVT9 282 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 APLNQ9ULZ1 77 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 CHCHD2Q9Y6H1 151 aaPredicted RBP0.84□□□□□ -2.27
VPS41-207ENST00000439468 U3KQ87 197 aa0.84□□□□□ -2.27
VPS41-207ENST00000439468 TRBV19A0A075B6N1 114 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 ZNF736B4DX44 427 aaPredicted RBP0.83□□□□□ -2.28
VPS41-207ENST00000439468 TAX1BP3O14907 124 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 ANP32AP39687 249 aaKnown RBP0.83□□□□□ -2.28
VPS41-207ENST00000439468 MRPS15P82914 257 aaKnown RBP0.83□□□□□ -2.28
VPS41-207ENST00000439468 RRN3P1Q2M238 152 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 Q8N814 137 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 PLPP5Q8NEB5 264 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 NAT14Q8WUY8 206 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 LCN9Q8WX39 176 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 SELENOSQ9BQE4 189 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 TMEM126AQ9H061 195 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 PARVBQ9HBI1 364 aa0.83□□□□□ -2.28
VPS41-207ENST00000439468 NHP2Q9NX24 153 aaKnown RBP0.83□□□□□ -2.28
VPS41-207ENST00000439468 BOKQ9UMX3 212 aaPredicted RBP0.83□□□□□ -2.28
VPS41-207ENST00000439468 TMEM256-PLSCR3K7ERE1 68 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 NDUFB3O43676 98 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 BANF1O75531 89 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 ZNF25P17030 456 aaPredicted RBP0.82□□□□□ -2.28
VPS41-207ENST00000439468 SPINT3P49223 89 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 AKIRIN2Q53H80 203 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 C1orf134Q5TEV5 83 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 HACD4Q5VWC8 232 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 C10orf99Q6UWK7 81 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 LINC00322Q6ZN03 302 aaPredicted RBP0.82□□□□□ -2.28
VPS41-207ENST00000439468 C14orf132Q9NPU4 83 aa0.82□□□□□ -2.28
VPS41-207ENST00000439468 H0YGG7 62 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 C1QBP02746 253 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 NCALDP61601 193 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 BTG2P78543 158 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 MT1HP80294 61 aa0.81□□□□□ -2.28
VPS41-207ENST00000439468 MRPS25P82663 173 aaKnown RBP0.81□□□□□ -2.28
VPS41-207ENST00000439468 SCIMPQ6UWF3 145 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms