RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 LTAP01374 205 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 LINC00694P0DN24 101 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 ZNF674Q2M3X9 581 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 ZFP82Q8N141 532 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 A0A087WWL8 130 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 TRBV6-1A0A0K0K1D8 114 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 PAGE4O60829 102 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 INAFM2P0DMQ5 153 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 LINC01559Q495D7 138 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 Q8N3U1 123 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 FAM213BQ8TBF2 198 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 SFT2D1Q8WV19 159 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 A0A1B0GV50 99 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 PFDN1O60925 122 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 ZNF345Q14585 488 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 DAZ4Q86SG3 579 aaKnown RBP12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 SFRP2Q96HF1 295 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 TMEM70Q9BUB7 260 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 DAZ3Q9NR90 486 aaKnown RBP12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 Q9UF83 564 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 UMAD1C9J7I0 102 aa12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 SMR3BP02814 79 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 S100A9P06702 114 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 SEC11BP0C7V7 166 aa12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 KCNIP4Q6PIL6 250 aa12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 ZNF471Q9BX82 626 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 KANTRA0A1W2PQU2 76 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 HAMPP81172 84 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 RMI2Q96E14 147 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 COX11Q9Y6N1 276 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 TRBV10-1A0A0K0K1A3 114 aa12.27□□□□□ -0.45
AC004540.1-201ENST00000439120 RPL36AP83881 106 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-201ENST00000439120 RPL36ALQ969Q0 106 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-201ENST00000439120 A0A087WX48 190 aa12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 A0A0D9SG52 128 aa12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 LECT2O14960 151 aa12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 EIF5AP63241 154 aaKnown RBP12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 MBD3L1Q8WWY6 194 aa12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 SCO2A0A1W2PP80 73 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 BCL2L11O43521 198 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 NIT1Q86X76 327 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 BAGE2Q86Y30 109 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 H2AFB1P0C5Y9 115 aa12.24□□□□□ -0.45
AC004540.1-201ENST00000439120 RPL19P84098 196 aaKnown RBP12.24□□□□□ -0.45
AC004540.1-201ENST00000439120 ELOBQ15370 118 aa12.24□□□□□ -0.45
AC004540.1-201ENST00000439120 ZNF56Q15929 161 aa12.24□□□□□ -0.45
AC004540.1-201ENST00000439120 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 IGKV2D-24A0A075B6R9 120 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 WFDC2Q14508 124 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 PRR27Q6MZM9 219 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 RAB4BP61018 213 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 OR10AG1Q8NH19 301 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 BAALCQ8WXS3 180 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 C1QBP02746 253 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 CXCL1P09341 107 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 UBE2D3P61077 147 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 UBE2D2P62837 147 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 UBE2WQ96B02 151 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
AC004540.1-201ENST00000439120 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
AC004540.1-201ENST00000439120 MLST8Q9BVC4 326 aa12.2□□□□□ -0.46
AC004540.1-201ENST00000439120 F5H697 171 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 SMIM17P0DL12 118 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 SSTP61278 116 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 Q8N976 141 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 OR10G8Q8NGN5 311 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 MANBALQ9NQG1 85 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 FAM30AQ9NZY2 134 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 GNG13Q9P2W3 67 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 MUC21A0A0G2JKD1 596 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 MUC21A0A140T8X8 626 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 RBFOX3A6NFN3 312 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 OR5AL1P0C617 328 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 RPL35P42766 123 aaKnown RBP12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 Q0VG73 95 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 TEX46H3BTG2 121 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 SNAI2O43623 268 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 CRPP02741 224 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 NEXN-AS1Q8NBZ9 246 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 PKIAP61925 76 aa12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 EIF5AL1Q6IS14 154 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 DAZAP1Q96EP5 407 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 AP1S3Q96PC3 154 aa12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 SSBP4Q9BWG4 385 aaPredicted RBP12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 C1orf43Q9BWL3 253 aa12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 FAT1Q14517 4588 aa12.15□□□□□ -0.46
AC004540.1-201ENST00000439120 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
AC004540.1-201ENST00000439120 TPPP3Q9BW30 176 aa12.15□□□□□ -0.46
AC004540.1-201ENST00000439120 ANGP03950 147 aaKnown RBP12.14□□□□□ -0.47
AC004540.1-201ENST00000439120 RAB5CP51148 216 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms