RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 LTAP01374 205 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 LINC00694P0DN24 101 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 ZNF674Q2M3X9 581 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 ZFP82Q8N141 532 aa12.32□□□□□ -0.44
AC004540.1-201ENST00000439120 A0A087WWL8 130 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 TRBV6-1A0A0K0K1D8 114 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 PAGE4O60829 102 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 INAFM2P0DMQ5 153 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 LINC01559Q495D7 138 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 Q8N3U1 123 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 FAM213BQ8TBF2 198 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 SFT2D1Q8WV19 159 aa12.31□□□□□ -0.44
AC004540.1-201ENST00000439120 A0A1B0GV50 99 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 PFDN1O60925 122 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 ZNF345Q14585 488 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 DAZ4Q86SG3 579 aaKnown RBP12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 KCNRGQ8N5I3 272 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 SFRP2Q96HF1 295 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 TMEM70Q9BUB7 260 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 DAZ3Q9NR90 486 aaKnown RBP12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 Q9UF83 564 aa12.3□□□□□ -0.44
AC004540.1-201ENST00000439120 UMAD1C9J7I0 102 aa12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 SMR3BP02814 79 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 S100A9P06702 114 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 SEC11BP0C7V7 166 aa12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 KCNIP4Q6PIL6 250 aa12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 ZNF471Q9BX82 626 aaPredicted RBP12.29□□□□□ -0.44
AC004540.1-201ENST00000439120 KANTRA0A1W2PQU2 76 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 HAMPP81172 84 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 RMI2Q96E14 147 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 COX11Q9Y6N1 276 aa12.28□□□□□ -0.44
AC004540.1-201ENST00000439120 TRBV10-1A0A0K0K1A3 114 aa12.27□□□□□ -0.45
AC004540.1-201ENST00000439120 RPL36AP83881 106 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-201ENST00000439120 RPL36ALQ969Q0 106 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-201ENST00000439120 A0A087WX48 190 aa12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 A0A0D9SG52 128 aa12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 LECT2O14960 151 aa12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 EIF5AP63241 154 aaKnown RBP12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 MBD3L1Q8WWY6 194 aa12.26□□□□□ -0.45
AC004540.1-201ENST00000439120 SCO2A0A1W2PP80 73 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 HMSDA8MTL9 139 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 BCL2L11O43521 198 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 NIT1Q86X76 327 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 BAGE2Q86Y30 109 aa12.25□□□□□ -0.45
AC004540.1-201ENST00000439120 H2AFB1P0C5Y9 115 aa12.24□□□□□ -0.45
AC004540.1-201ENST00000439120 RPL19P84098 196 aaKnown RBP12.24□□□□□ -0.45
AC004540.1-201ENST00000439120 ELOBQ15370 118 aa12.24□□□□□ -0.45
AC004540.1-201ENST00000439120 ZNF56Q15929 161 aa12.24□□□□□ -0.45
AC004540.1-201ENST00000439120 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 IGKV2D-24A0A075B6R9 120 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 WFDC2Q14508 124 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 PRR27Q6MZM9 219 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 KLK12Q9UKR0 248 aa12.23□□□□□ -0.45
AC004540.1-201ENST00000439120 RAB4BP61018 213 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 SPANXN1Q5VSR9 72 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 OR10AG1Q8NH19 301 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 BAALCQ8WXS3 180 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
AC004540.1-201ENST00000439120 C1QBP02746 253 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 CXCL1P09341 107 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 UBE2D3P61077 147 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 UBE2D2P62837 147 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 UBE2WQ96B02 151 aa12.21□□□□□ -0.45
AC004540.1-201ENST00000439120 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
AC004540.1-201ENST00000439120 TMUB2Q71RG4 321 aa12.2□□□□□ -0.46
AC004540.1-201ENST00000439120 MLST8Q9BVC4 326 aa12.2□□□□□ -0.46
AC004540.1-201ENST00000439120 F5H697 171 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 SMIM17P0DL12 118 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 SSTP61278 116 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 Q8N976 141 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 OR10G8Q8NGN5 311 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 MANBALQ9NQG1 85 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 FAM30AQ9NZY2 134 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 GNG13Q9P2W3 67 aa12.19□□□□□ -0.46
AC004540.1-201ENST00000439120 MUC21A0A0G2JKD1 596 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 MUC21A0A140T8X8 626 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 RBFOX3A6NFN3 312 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 OR5AL1P0C617 328 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 RPL35P42766 123 aaKnown RBP12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 Q0VG73 95 aa12.18□□□□□ -0.46
AC004540.1-201ENST00000439120 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 TEX46H3BTG2 121 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 SNAI2O43623 268 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 CRPP02741 224 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 NEXN-AS1Q8NBZ9 246 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
AC004540.1-201ENST00000439120 PKIAP61925 76 aa12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 EIF5AL1Q6IS14 154 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 DAZAP1Q96EP5 407 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 AP1S3Q96PC3 154 aa12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 SSBP4Q9BWG4 385 aaPredicted RBP12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 C1orf43Q9BWL3 253 aa12.16□□□□□ -0.46
AC004540.1-201ENST00000439120 FAT1Q14517 4588 aa12.15□□□□□ -0.46
AC004540.1-201ENST00000439120 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
AC004540.1-201ENST00000439120 TPPP3Q9BW30 176 aa12.15□□□□□ -0.46
AC004540.1-201ENST00000439120 ANGP03950 147 aaKnown RBP12.14□□□□□ -0.47
AC004540.1-201ENST00000439120 RAB5CP51148 216 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms