RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SLC25A31Q9H0C2 315 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 SH3BGRL3Q9H299 93 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 SMDT1Q9H4I9 107 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 BANF2Q9H503 90 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 C11orf1Q9H5F2 150 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 LINC00574Q9H8X3 128 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF286AQ9HBT8 521 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF355PQ9NSJ1 428 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 SPANXCQ9NY87 97 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 IDI2-AS1Q9NZ38 188 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 CACFD1Q9UGQ2 172 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 AK3Q9UIJ7 227 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 LINC00527Q9UJ94 153 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF222Q9UK12 451 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 C14orf166Q9Y224 244 aaKnown RBP1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 RFNGQ9Y644 331 aa1.19□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGLV3-9A0A075B6K5 115 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 A0A087WTM6 91 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 DEFB131BA0A096LNP1 70 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGHV2-26A0A0B4J1V2 119 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 TRAV1-1A0A0B4J248 108 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGKV1-6A0A0C4DH72 117 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 A0A1B0GVX0 72 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 KANTRA0A1W2PQU2 76 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 MEIS3P1A6NDR6 274 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF850A8MQ14 1090 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 UMAD1C9J7I0 102 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 C9JQL5 133 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 TSTD3H0UI37 97 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 GPR31O00270 319 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 SDCBPO00560 298 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ISLRO14498 428 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 DEGS1O15121 323 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ARPC5O15511 151 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF737O75373 536 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 PGLYRP1O75594 196 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 SIX6O95475 246 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 PPYP01298 95 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 PFN1P07737 140 aaKnown RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 SEC11BP0C7V7 166 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF688P0C7X2 276 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF728P0DKX0 622 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 CGB3P0DN86 165 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 CGB7P0DN87 165 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ESDP10768 282 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 TPT1P13693 172 aaKnown RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 NPY1RP25929 384 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 IL3RAP26951 378 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 REG1BP48304 166 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 RAB5CP51148 216 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 PIGPP57054 158 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 RPS28P62857 69 aaKnown RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 RUNX1Q01196 453 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 FLI1Q01543 452 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 JOSD1Q15040 202 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR8G1Q15617 311 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 HMGN3Q15651 99 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 SCGB2B2Q4G0G5 96 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 NMSQ5H8A3 153 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 FAM201AQ5SY85 155 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 C1orf194Q5T5A4 169 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM78Q5T7P6 136 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR2T2Q6IF00 324 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 HAGHLQ6PII5 290 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 Q6ZSA8 131 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 SLC25A26Q70HW3 274 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 C6orf201Q7Z4U5 140 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 WDR86Q86TI4 376 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 MDP1Q86V88 176 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR11H6Q8NGC7 330 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR8A1Q8NGG7 326 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR10K1Q8NGX5 313 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 MRPL30Q8TCC3 161 aaKnown RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 KLF14Q8TD94 323 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ORAOV1Q8WV07 137 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 RTN4IP1Q8WWV3 396 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 RBPMSQ93062 196 aaKnown RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 SMIM8Q96KF7 97 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR4C12Q96R67 309 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 GINS3Q9BRX5 216 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM243Q9BU79 118 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 RTL8AQ9BWD3 113 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 GGTLC1Q9BX51 225 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 MRPL20Q9BYC9 149 aaKnown RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 EIF5A2Q9GZV4 153 aaKnown RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM222Q9H0R3 208 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 NAA60Q9H7X0 242 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 PARP11Q9NR21 331 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 COA4Q9NYJ1 87 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 RBM12B-AS1Q9P1G2 102 aa1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF230Q9UIE0 474 aaPredicted RBP1.18□□□□□ -2.22
HMGB1P18-201ENST00000438801 FXYD6-FXYD2A0A087WZ82 144 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 SMIM26A0A096LP01 95 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 BORCS7-ASMTA0A0B4J1R7 106 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGHV1-18A0A0C4DH31 117 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 C3orf85A0A1B0GTC6 90 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM30CPA0ZSE6 113 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGSF23A1L1A6 192 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM218A2RU14 115 aa1.17□□□□□ -2.22
HMGB1P18-201ENST00000438801 H3BP45 60 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms