RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 FAM74A4Q5TZK3 123 aa11.95□□□□□ -0.5
GTF3A-204ENST00000438571 LINC00528Q8N1L1 170 aa11.95□□□□□ -0.5
GTF3A-204ENST00000438571 hCG_2014768A0A024R1R8 64 aa11.94□□□□□ -0.5
GTF3A-204ENST00000438571 A0A087WWL8 130 aa11.94□□□□□ -0.5
GTF3A-204ENST00000438571 FXYD6-FXYD2A0A087WZ82 144 aa11.94□□□□□ -0.5
GTF3A-204ENST00000438571 TRAV8-3A0A0A6YYJ7 113 aa11.94□□□□□ -0.5
GTF3A-204ENST00000438571 TMSB15BA0A087X1C1 80 aa11.93□□□□□ -0.5
GTF3A-204ENST00000438571 DNLZQ5SXM8 178 aa11.93□□□□□ -0.5
GTF3A-204ENST00000438571 NIT1Q86X76 327 aa11.93□□□□□ -0.5
GTF3A-204ENST00000438571 G3V3Q6 166 aa11.92□□□□□ -0.5
GTF3A-204ENST00000438571 GIPP09681 153 aaPredicted RBP11.92□□□□□ -0.5
GTF3A-204ENST00000438571 SCXQ7RTU7 201 aa11.92□□□□□ -0.5
GTF3A-204ENST00000438571 OR11H4Q8NGC9 324 aa11.92□□□□□ -0.5
GTF3A-204ENST00000438571 KLK12Q9UKR0 248 aa11.92□□□□□ -0.5
GTF3A-204ENST00000438571 M0R381 172 aa11.91□□□□□ -0.5
GTF3A-204ENST00000438571 RHODO00212 210 aa11.91□□□□□ -0.5
GTF3A-204ENST00000438571 SFRP2Q96HF1 295 aa11.91□□□□□ -0.5
GTF3A-204ENST00000438571 IGKV2D-24A0A075B6R9 120 aa11.9□□□□□ -0.5
GTF3A-204ENST00000438571 A0A087WWC5 75 aa11.9□□□□□ -0.5
GTF3A-204ENST00000438571 BORCS7-ASMTA0A0B4J1R7 106 aa11.9□□□□□ -0.5
GTF3A-204ENST00000438571 J3QL48 77 aa11.9□□□□□ -0.5
GTF3A-204ENST00000438571 TOR2AQ5JU69 321 aa11.9□□□□□ -0.5
GTF3A-204ENST00000438571 COX8CQ7Z4L0 72 aa11.9□□□□□ -0.5
GTF3A-204ENST00000438571 SYT8Q8NBV8 401 aa11.9□□□□□ -0.5
GTF3A-204ENST00000438571 INO80EQ8NBZ0 244 aaPredicted RBP11.9□□□□□ -0.5
GTF3A-204ENST00000438571 HIST1H2BAQ96A08 127 aa11.9□□□□□ -0.5
GTF3A-204ENST00000438571 MAP1LC3B2A6NCE7 125 aa11.89□□□□□ -0.51
GTF3A-204ENST00000438571 LINC01559Q495D7 138 aa11.89□□□□□ -0.51
GTF3A-204ENST00000438571 AKR1C8PQ5T2L2 129 aa11.89□□□□□ -0.51
GTF3A-204ENST00000438571 MAP1LC3BQ9GZQ8 125 aa11.89□□□□□ -0.51
GTF3A-204ENST00000438571 PLA2G1BP04054 148 aaKnown RBP11.88□□□□□ -0.51
GTF3A-204ENST00000438571 KRTAP10-4P60372 401 aaPredicted RBP11.88□□□□□ -0.51
GTF3A-204ENST00000438571 ZNF674Q2M3X9 581 aa11.88□□□□□ -0.51
GTF3A-204ENST00000438571 FAM162BQ5T6X4 162 aa11.88□□□□□ -0.51
GTF3A-204ENST00000438571 UBE2WQ96B02 151 aa11.88□□□□□ -0.51
GTF3A-204ENST00000438571 CYTL1Q9NRR1 136 aa11.88□□□□□ -0.51
GTF3A-204ENST00000438571 PHLDA3Q9Y5J5 127 aa11.88□□□□□ -0.51
GTF3A-204ENST00000438571 URGCP-MRPS24S4R325 110 aa11.88□□□□□ -0.51
GTF3A-204ENST00000438571 RBFOX3A6NFN3 312 aa11.87□□□□□ -0.51
GTF3A-204ENST00000438571 TPT1P13693 172 aaKnown RBP11.87□□□□□ -0.51
GTF3A-204ENST00000438571 FHITP49789 147 aa11.87□□□□□ -0.51
GTF3A-204ENST00000438571 UBE2D3P61077 147 aa11.87□□□□□ -0.51
GTF3A-204ENST00000438571 UBE2G1P62253 170 aa11.87□□□□□ -0.51
GTF3A-204ENST00000438571 UBE2D2P62837 147 aa11.87□□□□□ -0.51
GTF3A-204ENST00000438571 RPL19P84098 196 aaKnown RBP11.87□□□□□ -0.51
GTF3A-204ENST00000438571 FMC1Q96HJ9 113 aa11.87□□□□□ -0.51
GTF3A-204ENST00000438571 ZFP30Q9Y2G7 519 aa11.87□□□□□ -0.51
GTF3A-204ENST00000438571 HMCN2Q8NDA2 5059 aa11.87□□□□□ -0.51
GTF3A-204ENST00000438571 LTAP01374 205 aa11.86□□□□□ -0.51
GTF3A-204ENST00000438571 ZFP82Q8N141 532 aa11.85□□□□□ -0.51
GTF3A-204ENST00000438571 RMI2Q96E14 147 aa11.85□□□□□ -0.51
GTF3A-204ENST00000438571 NKX6-2Q9C056 277 aaPredicted RBP11.85□□□□□ -0.51
GTF3A-204ENST00000438571 COX11Q9Y6N1 276 aa11.85□□□□□ -0.51
GTF3A-204ENST00000438571 A0A087WX48 190 aa11.84□□□□□ -0.51
GTF3A-204ENST00000438571 TRBV6-1A0A0K0K1D8 114 aa11.84□□□□□ -0.51
GTF3A-204ENST00000438571 KRTAP29-1A8MX34 341 aaPredicted RBP11.84□□□□□ -0.51
GTF3A-204ENST00000438571 ARPC5O15511 151 aa11.84□□□□□ -0.51
GTF3A-204ENST00000438571 AKR1C3P42330 323 aa11.84□□□□□ -0.51
GTF3A-204ENST00000438571 RPL36AP83881 106 aaKnown RBP11.84□□□□□ -0.51
GTF3A-204ENST00000438571 CST9LP1Q5W188 147 aa11.84□□□□□ -0.51
GTF3A-204ENST00000438571 ATRAIDQ6UW56 229 aa11.84□□□□□ -0.51
GTF3A-204ENST00000438571 Q8N976 141 aa11.84□□□□□ -0.51
GTF3A-204ENST00000438571 OR10AG1Q8NH19 301 aa11.84□□□□□ -0.51
GTF3A-204ENST00000438571 RPL36ALQ969Q0 106 aaKnown RBP11.84□□□□□ -0.51
GTF3A-204ENST00000438571 TRBV10-1A0A0K0K1A3 114 aa11.83□□□□□ -0.52
GTF3A-204ENST00000438571 SMLR1H3BR10 107 aa11.83□□□□□ -0.52
GTF3A-204ENST00000438571 ENHOQ6UWT2 76 aa11.83□□□□□ -0.52
GTF3A-204ENST00000438571 NEXN-AS1Q8NBZ9 246 aa11.83□□□□□ -0.52
GTF3A-204ENST00000438571 CIRBP-AS1Q8TBR5 109 aa11.83□□□□□ -0.52
GTF3A-204ENST00000438571 TRBV7-3A0A075B6L6 115 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 MUC21A0A0G2JKD1 596 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 MUC21A0A140T8X8 626 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 A0A1B0GV50 99 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 PAGE4O60829 102 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 MPV17L2Q567V2 206 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 DEFB104AQ8WTQ1 72 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 CHCHD7Q9BUK0 85 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 CHAC1Q9BUX1 264 aa11.82□□□□□ -0.52
GTF3A-204ENST00000438571 SCO2A0A1W2PP80 73 aa11.81□□□□□ -0.52
GTF3A-204ENST00000438571 ZNF56Q15929 161 aa11.81□□□□□ -0.52
GTF3A-204ENST00000438571 OR10G8Q8NGN5 311 aa11.81□□□□□ -0.52
GTF3A-204ENST00000438571 TRBV6-8A0A0A6YYG3 113 aa11.8□□□□□ -0.52
GTF3A-204ENST00000438571 PRR27Q6MZM9 219 aa11.8□□□□□ -0.52
GTF3A-204ENST00000438571 C15orf54Q8N8G6 183 aa11.8□□□□□ -0.52
GTF3A-204ENST00000438571 STOML3Q8TAV4 291 aa11.8□□□□□ -0.52
GTF3A-204ENST00000438571 TMEM262E9PQX1 116 aa11.79□□□□□ -0.52
GTF3A-204ENST00000438571 SEC11BP0C7V7 166 aa11.79□□□□□ -0.52
GTF3A-204ENST00000438571 RAB4BP61018 213 aa11.78□□□□□ -0.52
GTF3A-204ENST00000438571 ELOBQ15370 118 aa11.78□□□□□ -0.52
GTF3A-204ENST00000438571 KCNIP4Q6PIL6 250 aa11.78□□□□□ -0.52
GTF3A-204ENST00000438571 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
GTF3A-204ENST00000438571 TCEAL7Q9BRU2 100 aa11.78□□□□□ -0.52
GTF3A-204ENST00000438571 C1orf43Q9BWL3 253 aa11.78□□□□□ -0.52
GTF3A-204ENST00000438571 SNAI2O43623 268 aa11.77□□□□□ -0.53
GTF3A-204ENST00000438571 HLA-DQA1P01909 254 aa11.77□□□□□ -0.53
GTF3A-204ENST00000438571 SSTP61278 116 aa11.77□□□□□ -0.53
GTF3A-204ENST00000438571 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.53
GTF3A-204ENST00000438571 FAM213BQ8TBF2 198 aa11.77□□□□□ -0.53
GTF3A-204ENST00000438571 MLST8Q9BVC4 326 aa11.77□□□□□ -0.53
GTF3A-204ENST00000438571 USP17L23D6RBM5 183 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms