RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 AKAP9Q99996 3911 aa4.55□□□□□ -1.68
SPEN-202ENST00000438066 RBAKDNA6NC62 111 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 A8MWL6 223 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 HLA-DQA1P01909 254 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 PRB4P10163 310 aaPredicted RBP4.54□□□□□ -1.68
SPEN-202ENST00000438066 CRIP1P50238 77 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 RPL19P84098 196 aaKnown RBP4.54□□□□□ -1.68
SPEN-202ENST00000438066 LCN12Q6JVE5 192 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 MRPL54Q6P161 138 aaKnown RBP4.54□□□□□ -1.68
SPEN-202ENST00000438066 ATP5L2Q7Z4Y8 100 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 GPHB5Q86YW7 130 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 TEX29Q8N6K0 151 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 SPATA3Q8NHX4 192 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 FOXC2Q99958 501 aa4.54□□□□□ -1.68
SPEN-202ENST00000438066 SETD2Q9BYW2 2564 aaPredicted RBP4.53□□□□□ -1.68
SPEN-202ENST00000438066 NOTCH2Q04721 2471 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 ZNF705FA8MVS1 300 aaPredicted RBP4.53□□□□□ -1.68
SPEN-202ENST00000438066 SPINK4O60575 86 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 FOXA3P55318 350 aaPredicted RBP4.53□□□□□ -1.68
SPEN-202ENST00000438066 GDF5OSQ5U4N7 250 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 TCF24Q7RTU0 167 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 TMEM86BQ8N661 226 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 RNF182Q8N6D2 247 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 SIGLECL1Q8N7X8 197 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 Q8TAT8 98 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 RASL10AQ92737 203 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 C12orf57Q99622 126 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 HIST1H2BLQ99880 126 aa4.53□□□□□ -1.68
SPEN-202ENST00000438066 DAZ1Q9NQZ3 744 aaKnown RBP4.53□□□□□ -1.68
SPEN-202ENST00000438066 NSD1Q96L73 2696 aaPredicted RBP4.53□□□□□ -1.68
SPEN-202ENST00000438066 IGHV7-4-1A0A0J9YVY3 117 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 A0A0J9YWU9 116 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 K7EMT4 169 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 PDZD11Q5EBL8 140 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 SAPCD1Q5SSQ6 148 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 OR2D3Q8NGH3 330 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 TP53TG3Q9ULZ0 132 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 SETXQ7Z333 2677 aaKnown RBP4.52□□□□□ -1.69
SPEN-202ENST00000438066 GRIFINA4D1Z8 144 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 A8MWP6 167 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 CD5LO43866 347 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 SH2D1AO60880 128 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 LGALS1P09382 135 aaKnown RBP4.52□□□□□ -1.69
SPEN-202ENST00000438066 GZMBP10144 247 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 S100A2P29034 98 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 HBBP68871 147 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 Q0VG73 95 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 FAM162BQ5T6X4 162 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 UBE2E2Q96LR5 201 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 SMPXQ9UHP9 88 aa4.52□□□□□ -1.69
SPEN-202ENST00000438066 FLNBO75369 2602 aaKnown RBP4.51□□□□□ -1.69
SPEN-202ENST00000438066 TMEM213A2RRL7 107 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 IGKV3-20P01619 116 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 ESDP10768 282 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 FABP4P15090 132 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 CRISP2P16562 243 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 ZNF80P51504 273 aaPredicted RBP4.51□□□□□ -1.69
SPEN-202ENST00000438066 RAB4BP61018 213 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 EGFEM1PQ0D2K5 195 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 PYY3Q5JQD4 70 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 Q6AWC8 147 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 TMEM256Q8N2U0 113 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 OR10D4PQ8NGN7 298 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 PACRGQ96M98 296 aaPredicted RBP4.51□□□□□ -1.69
SPEN-202ENST00000438066 RHPN1-AS1Q9BWJ2 59 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 AGPAT4-IT1Q9H0P7 198 aa4.51□□□□□ -1.69
SPEN-202ENST00000438066 LYRM9A8MSI8 78 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 F2Z2F3 143 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 LGALS9O00182 355 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 NUPR1O60356 82 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 APCSP02743 223 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 CTRLP40313 264 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 ZNF138P52744 262 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 ERCC8Q13216 396 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 OR10J3Q5JRS4 329 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 POM121L12Q8N7R1 296 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 GATD1Q8NB37 220 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 KIR2DL4Q99706 377 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 NDFIP1Q9BT67 221 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 UFC1Q9Y3C8 167 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 HIVEP2P31629 2446 aa4.5□□□□□ -1.69
SPEN-202ENST00000438066 A0A1B0GUT8 65 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 SERF1AO75920 110 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 ARMS2P0C7Q2 107 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 IGLC6P0CF74 106 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 SRIP30626 198 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 C14orf177Q52M58 125 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 TCTEX1D4Q5JR98 221 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 TMEM78Q5T7P6 136 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 C18orf32Q8TCD1 76 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 DCANP1Q8TF63 244 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 LENEPQ9Y5L5 61 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 BAHCC1Q9P281 2608 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 NIPBLQ6KC79 2804 aaeCLIP4.49□□□□□ -1.693e-7■■□□□ 13.1
SPEN-202ENST00000438066 CUBNO60494 3623 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 A0A1B0GW15 77 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 TMEM189A5PLL7 270 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 SMKR1H3BMG3 65 aa4.49□□□□□ -1.69
SPEN-202ENST00000438066 RPS20P60866 119 aaKnown RBP4.49□□□□□ -1.69
SPEN-202ENST00000438066 NUTF2P61970 127 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms