RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 CYTL1Q9NRR1 136 aa10.72□□□□□ -0.69
AC055876.3-201ENST00000431496 MAP1LC3B2A6NCE7 125 aa10.71□□□□□ -0.69
AC055876.3-201ENST00000431496 ZNF674Q2M3X9 581 aa10.71□□□□□ -0.69
AC055876.3-201ENST00000431496 TOR2AQ5JU69 321 aa10.71□□□□□ -0.69
AC055876.3-201ENST00000431496 SFRP2Q96HF1 295 aa10.71□□□□□ -0.69
AC055876.3-201ENST00000431496 FMC1Q96HJ9 113 aa10.71□□□□□ -0.69
AC055876.3-201ENST00000431496 DNAH8Q96JB1 4490 aa10.71□□□□□ -0.69
AC055876.3-201ENST00000431496 MAP1LC3BQ9GZQ8 125 aa10.71□□□□□ -0.69
AC055876.3-201ENST00000431496 TRBV6-1A0A0K0K1D8 114 aa10.7□□□□□ -0.7
AC055876.3-201ENST00000431496 FHITP49789 147 aa10.7□□□□□ -0.7
AC055876.3-201ENST00000431496 UBE2G1P62253 170 aa10.7□□□□□ -0.7
AC055876.3-201ENST00000431496 PHLDA3Q9Y5J5 127 aa10.7□□□□□ -0.7
AC055876.3-201ENST00000431496 ARPC5O15511 151 aa10.69□□□□□ -0.7
AC055876.3-201ENST00000431496 LTAP01374 205 aa10.69□□□□□ -0.7
AC055876.3-201ENST00000431496 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
AC055876.3-201ENST00000431496 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
AC055876.3-201ENST00000431496 CST9LP1Q5W188 147 aa10.69□□□□□ -0.7
AC055876.3-201ENST00000431496 STOML3Q8TAV4 291 aa10.69□□□□□ -0.7
AC055876.3-201ENST00000431496 TCEAL7Q9BRU2 100 aa10.69□□□□□ -0.7
AC055876.3-201ENST00000431496 COX11Q9Y6N1 276 aa10.69□□□□□ -0.7
AC055876.3-201ENST00000431496 A0A087WWL8 130 aa10.68□□□□□ -0.7
AC055876.3-201ENST00000431496 TMSB15BA0A087X1C1 80 aa10.68□□□□□ -0.7
AC055876.3-201ENST00000431496 LECT2O14960 151 aa10.68□□□□□ -0.7
AC055876.3-201ENST00000431496 TPT1P13693 172 aaKnown RBP10.68□□□□□ -0.7
AC055876.3-201ENST00000431496 NIT1Q86X76 327 aa10.68□□□□□ -0.7
AC055876.3-201ENST00000431496 M0R381 172 aa10.67□□□□□ -0.7
AC055876.3-201ENST00000431496 BAALCQ8WXS3 180 aa10.67□□□□□ -0.7
AC055876.3-201ENST00000431496 URGCP-MRPS24S4R325 110 aa10.67□□□□□ -0.7
AC055876.3-201ENST00000431496 TRBV10-1A0A0K0K1A3 114 aa10.66□□□□□ -0.7
AC055876.3-201ENST00000431496 SEC11BP0C7V7 166 aa10.66□□□□□ -0.7
AC055876.3-201ENST00000431496 Q6ZSA8 131 aa10.66□□□□□ -0.7
AC055876.3-201ENST00000431496 ZFP82Q8N141 532 aa10.66□□□□□ -0.7
AC055876.3-201ENST00000431496 RMI2Q96E14 147 aa10.66□□□□□ -0.7
AC055876.3-201ENST00000431496 PAGE4O60829 102 aa10.65□□□□□ -0.7
AC055876.3-201ENST00000431496 AKR1C3P42330 323 aa10.65□□□□□ -0.7
AC055876.3-201ENST00000431496 DNAJC30Q96LL9 226 aa10.65□□□□□ -0.7
AC055876.3-201ENST00000431496 KLK12Q9UKR0 248 aa10.65□□□□□ -0.7
AC055876.3-201ENST00000431496 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 TRBV7-3A0A075B6L6 115 aa10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 UBE2D3P61077 147 aa10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 UBE2D2P62837 147 aa10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 RPL36AP83881 106 aaKnown RBP10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 Q8N976 141 aa10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 MBD3L1Q8WWY6 194 aa10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 RPL36ALQ969Q0 106 aaKnown RBP10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 CHCHD7Q9BUK0 85 aa10.64□□□□□ -0.71
AC055876.3-201ENST00000431496 IGKV2D-24A0A075B6R9 120 aa10.63□□□□□ -0.71
AC055876.3-201ENST00000431496 A0A087WX48 190 aa10.63□□□□□ -0.71
AC055876.3-201ENST00000431496 SMLR1H3BR10 107 aa10.63□□□□□ -0.71
AC055876.3-201ENST00000431496 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
AC055876.3-201ENST00000431496 ELOBQ15370 118 aa10.63□□□□□ -0.71
AC055876.3-201ENST00000431496 RGS21Q2M5E4 152 aa10.63□□□□□ -0.71
AC055876.3-201ENST00000431496 SFT2D1Q8WV19 159 aa10.63□□□□□ -0.71
AC055876.3-201ENST00000431496 KCNRGQ8N5I3 272 aa10.62□□□□□ -0.71
AC055876.3-201ENST00000431496 OR10G8Q8NGN5 311 aa10.62□□□□□ -0.71
AC055876.3-201ENST00000431496 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
AC055876.3-201ENST00000431496 MLST8Q9BVC4 326 aa10.62□□□□□ -0.71
AC055876.3-201ENST00000431496 RBFOX3A6NFN3 312 aa10.61□□□□□ -0.71
AC055876.3-201ENST00000431496 UMAD1C9J7I0 102 aa10.61□□□□□ -0.71
AC055876.3-201ENST00000431496 PLA2G1BP04054 148 aaKnown RBP10.61□□□□□ -0.71
AC055876.3-201ENST00000431496 RAB4BP61018 213 aa10.61□□□□□ -0.71
AC055876.3-201ENST00000431496 LINC01620Q4KN68 170 aa10.61□□□□□ -0.71
AC055876.3-201ENST00000431496 KCNIP4Q6PIL6 250 aa10.61□□□□□ -0.71
AC055876.3-201ENST00000431496 ATRAIDQ6UW56 229 aa10.61□□□□□ -0.71
AC055876.3-201ENST00000431496 FAM213BQ8TBF2 198 aa10.61□□□□□ -0.71
AC055876.3-201ENST00000431496 CXCL1P09341 107 aa10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 RPL19P84098 196 aaKnown RBP10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 Q0VG73 95 aa10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 ZNF345Q14585 488 aa10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 PRR27Q6MZM9 219 aa10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 BAGE2Q86Y30 109 aa10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 LINC00528Q8N1L1 170 aa10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 OR10AG1Q8NH19 301 aa10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 SSBP4Q9BWG4 385 aaPredicted RBP10.6□□□□□ -0.71
AC055876.3-201ENST00000431496 TRBV6-8A0A0A6YYG3 113 aa10.59□□□□□ -0.71
AC055876.3-201ENST00000431496 A0A1B0GV50 99 aa10.59□□□□□ -0.71
AC055876.3-201ENST00000431496 SCO2A0A1W2PP80 73 aa10.59□□□□□ -0.71
AC055876.3-201ENST00000431496 TMEM262E9PQX1 116 aa10.59□□□□□ -0.71
AC055876.3-201ENST00000431496 NEXN-AS1Q8NBZ9 246 aa10.59□□□□□ -0.71
AC055876.3-201ENST00000431496 ZNF471Q9BX82 626 aaPredicted RBP10.59□□□□□ -0.71
AC055876.3-201ENST00000431496 HMSDA8MTL9 139 aa10.58□□□□□ -0.72
AC055876.3-201ENST00000431496 SNAI2O43623 268 aa10.58□□□□□ -0.72
AC055876.3-201ENST00000431496 ZNF56Q15929 161 aa10.58□□□□□ -0.72
AC055876.3-201ENST00000431496 TMUB2Q71RG4 321 aa10.58□□□□□ -0.72
AC055876.3-201ENST00000431496 A0A0D9SG52 128 aa10.57□□□□□ -0.72
AC055876.3-201ENST00000431496 MUC21A0A0G2JKD1 596 aa10.57□□□□□ -0.72
AC055876.3-201ENST00000431496 MUC21A0A140T8X8 626 aa10.57□□□□□ -0.72
AC055876.3-201ENST00000431496 PFDN1O60925 122 aa10.57□□□□□ -0.72
AC055876.3-201ENST00000431496 OR5AL1P0C617 328 aa10.57□□□□□ -0.72
AC055876.3-201ENST00000431496 ENHOQ6UWT2 76 aa10.57□□□□□ -0.72
AC055876.3-201ENST00000431496 J3QL48 77 aa10.56□□□□□ -0.72
AC055876.3-201ENST00000431496 H2AFB1P0C5Y9 115 aa10.56□□□□□ -0.72
AC055876.3-201ENST00000431496 SPANXN1Q5VSR9 72 aa10.56□□□□□ -0.72
AC055876.3-201ENST00000431496 SCXQ7RTU7 201 aa10.56□□□□□ -0.72
AC055876.3-201ENST00000431496 CHAC1Q9BUX1 264 aa10.56□□□□□ -0.72
AC055876.3-201ENST00000431496 F5H697 171 aa10.55□□□□□ -0.72
AC055876.3-201ENST00000431496 BCL2L11O43521 198 aa10.55□□□□□ -0.72
AC055876.3-201ENST00000431496 MPV17L2Q567V2 206 aa10.55□□□□□ -0.72
AC055876.3-201ENST00000431496 C15orf54Q8N8G6 183 aa10.55□□□□□ -0.72
AC055876.3-201ENST00000431496 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms