RNA–Protein interactions for RNA: ENST00000430644.5

PCGF3-205, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 2,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-205ENST00000430644 GAGE12GP0CL81 117 aa13.12□□□□□ -0.31
PCGF3-205ENST00000430644 GAGE12IP0CL82 117 aa13.12□□□□□ -0.31
PCGF3-205ENST00000430644 RNASE3P12724 160 aaKnown RBP13.12□□□□□ -0.31
PCGF3-205ENST00000430644 GAGE4Q13068 117 aa13.12□□□□□ -0.31
PCGF3-205ENST00000430644 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
PCGF3-205ENST00000430644 U3KQE9 123 aa13.12□□□□□ -0.31
PCGF3-205ENST00000430644 TEX49A0A1B0GTD5 131 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 PPP1R17O96001 155 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 LGALS3P17931 250 aaKnown RBP13.11□□□□□ -0.31
PCGF3-205ENST00000430644 RNASE4P34096 147 aaKnown RBP13.11□□□□□ -0.31
PCGF3-205ENST00000430644 LINC00315P59091 139 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 TTC32Q5I0X7 151 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 MUC4Q99102 2169 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 TRAV2A0A0B4J234 112 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 IFITM1P13164 125 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 ZNF876PQ49A33 203 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 JPT2Q9H910 190 aa13.11□□□□□ -0.31
PCGF3-205ENST00000430644 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
PCGF3-205ENST00000430644 LINC00477Q96M19 166 aa13.1□□□□□ -0.31
PCGF3-205ENST00000430644 ODF3Q96PU9 254 aa13.1□□□□□ -0.31
PCGF3-205ENST00000430644 IGHV4-39P01824 125 aa13.1□□□□□ -0.31
PCGF3-205ENST00000430644 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
PCGF3-205ENST00000430644 KIF25-AS1Q9Y6Z4 181 aa13.1□□□□□ -0.31
PCGF3-205ENST00000430644 MUSTN1Q8IVN3 82 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 TMEM141Q96I45 108 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 LINC01620Q4KN68 170 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 C9orf139Q6ZV77 190 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 IGHV3-64A0A075B6Q5 118 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 TRBV7-9A0A0J9YWB2 115 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 F6UB75 175 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 P0DMU3 169 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 FAM231AP0DMU4 169 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 FAM231CP0DMU5 169 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 POM121L12Q8N7R1 296 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 OR10J6PQ8NGY7 276 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 TIMM17AQ99595 171 aa13.09□□□□□ -0.31
PCGF3-205ENST00000430644 OPRPNQ99935 248 aaPredicted RBP13.09□□□□□ -0.31
PCGF3-205ENST00000430644 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
PCGF3-205ENST00000430644 IGHV4OR15-8A0A075B7B6 117 aa13.08□□□□□ -0.32
PCGF3-205ENST00000430644 A0A087WW49 117 aa13.08□□□□□ -0.32
PCGF3-205ENST00000430644 Q1RN00 199 aa13.08□□□□□ -0.32
PCGF3-205ENST00000430644 A0A0B4J2C4 111 aa13.08□□□□□ -0.32
PCGF3-205ENST00000430644 SUMO4Q6EEV6 95 aa13.08□□□□□ -0.32
PCGF3-205ENST00000430644 ANKHD1Q8IWZ3 2542 aaKnown RBP13.07□□□□□ -0.32
PCGF3-205ENST00000430644 MED14OSP0DP75 135 aa13.07□□□□□ -0.32
PCGF3-205ENST00000430644 KLK9Q2XQG4 91 aa13.07□□□□□ -0.32
PCGF3-205ENST00000430644 SHISA2Q6UWI4 295 aa13.07□□□□□ -0.32
PCGF3-205ENST00000430644 C15orf53Q8NAA6 179 aa13.07□□□□□ -0.32
PCGF3-205ENST00000430644 KLK9Q9UKQ9 250 aa13.07□□□□□ -0.32
PCGF3-205ENST00000430644 A0A087WWL8 130 aa13.07□□□□□ -0.32
PCGF3-205ENST00000430644 ATXN8Q156A1 80 aa13.07□□□□□ -0.32
PCGF3-205ENST00000430644 FAM159AQ6UWV7 190 aa13.07□□□□□ -0.32
PCGF3-205ENST00000430644 TRAV8-4A0A0B4J246 113 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 OOSP1A8MZH6 123 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 VCYO14598 125 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 RPL32P62910 135 aaKnown RBP13.06□□□□□ -0.32
PCGF3-205ENST00000430644 SMIM20Q8N5G0 67 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 ZFHX3Q15911 3703 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 TRBV7-1A0A0A6YYK4 115 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 SDHAF1A6NFY7 115 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 K7ENP7 123 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 C1orf122Q6ZSJ8 110 aa13.06□□□□□ -0.32
PCGF3-205ENST00000430644 HERV-K104P63124 156 aa13.05□□□□□ -0.32
PCGF3-205ENST00000430644 MINOS1Q5TGZ0 78 aa13.05□□□□□ -0.32
PCGF3-205ENST00000430644 Q6Q795 121 aa13.05□□□□□ -0.32
PCGF3-205ENST00000430644 MINOS1-NBL1R4GNA1 71 aa13.05□□□□□ -0.32
PCGF3-205ENST00000430644 TLN1Q9Y490 2541 aaKnown RBP13.05□□□□□ -0.32
PCGF3-205ENST00000430644 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
PCGF3-205ENST00000430644 F5H697 171 aa13.05□□□□□ -0.32
PCGF3-205ENST00000430644 ZNF580Q9UK33 172 aa13.05□□□□□ -0.32
PCGF3-205ENST00000430644 LEPROTO15243 131 aa13.04□□□□□ -0.32
PCGF3-205ENST00000430644 RPL13AP40429 203 aaKnown RBP13.04□□□□□ -0.32
PCGF3-205ENST00000430644 ATRXP46100 2492 aa13.04□□□□□ -0.32
PCGF3-205ENST00000430644 OVOL1O14753 267 aa13.04□□□□□ -0.32
PCGF3-205ENST00000430644 TRIAP1O43715 76 aa13.04□□□□□ -0.32
PCGF3-205ENST00000430644 NXPH4O95158 308 aa13.04□□□□□ -0.32
PCGF3-205ENST00000430644 UNQ9165/PRO28630Q6UXU0 137 aa13.04□□□□□ -0.32
PCGF3-205ENST00000430644 FAM19A4Q96LR4 140 aa13.04□□□□□ -0.32
PCGF3-205ENST00000430644 ZNF256Q9Y2P7 627 aaPredicted RBP13.04□□□□□ -0.32
PCGF3-205ENST00000430644 TRBV10-2A0A0K0K1G8 114 aa13.03□□□□□ -0.32
PCGF3-205ENST00000430644 PRR30Q53SZ7 412 aaPredicted RBP13.03□□□□□ -0.32
PCGF3-205ENST00000430644 SOCS3O14543 225 aa13.03□□□□□ -0.32
PCGF3-205ENST00000430644 ZFP36P26651 326 aaKnown RBP13.03□□□□□ -0.32
PCGF3-205ENST00000430644 GRNP28799 593 aaKnown RBP13.03□□□□□ -0.32
PCGF3-205ENST00000430644 Q8NA96 180 aa13.03□□□□□ -0.32
PCGF3-205ENST00000430644 IGKV3-7A0A075B6H7 116 aa13.02□□□□□ -0.32
PCGF3-205ENST00000430644 FAM110AQ9BQ89 295 aa13.02□□□□□ -0.32
PCGF3-205ENST00000430644 H3BMM0 161 aa13.02□□□□□ -0.33
PCGF3-205ENST00000430644 UBE2WQ96B02 151 aa13.02□□□□□ -0.33
PCGF3-205ENST00000430644 LINC00527Q9UJ94 153 aa13.02□□□□□ -0.33
PCGF3-205ENST00000430644 ITPR1Q14643 2758 aa13.01□□□□□ -0.33
PCGF3-205ENST00000430644 TRBV27A0A0K0K1C4 114 aa13.01□□□□□ -0.33
PCGF3-205ENST00000430644 CFAP161Q6P656 301 aa13.01□□□□□ -0.33
PCGF3-205ENST00000430644 LINC01600Q96MT4 127 aa13.01□□□□□ -0.33
PCGF3-205ENST00000430644 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.01□□□□□ -0.33
PCGF3-205ENST00000430644 LGALS9O00182 355 aa13.01□□□□□ -0.33
PCGF3-205ENST00000430644 ZNF22P17026 224 aaPredicted RBP13.01□□□□□ -0.33
PCGF3-205ENST00000430644 RPL11P62913 178 aaKnown RBP13.01□□□□□ -0.33
PCGF3-205ENST00000430644 ADARB2-AS1A8MUL3 147 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms