RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SFRP2Q96HF1 295 aa11.3□□□□□ -0.6
CPSF4-203ENST00000430038 ZFP30Q9Y2G7 519 aa11.3□□□□□ -0.6
CPSF4-203ENST00000430038 LAGE3Q14657 143 aa11.29□□□□□ -0.6
CPSF4-203ENST00000430038 LINC01559Q495D7 138 aa11.29□□□□□ -0.6
CPSF4-203ENST00000430038 FAM162BQ5T6X4 162 aa11.29□□□□□ -0.6
CPSF4-203ENST00000430038 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
CPSF4-203ENST00000430038 FMC1Q96HJ9 113 aa11.29□□□□□ -0.6
CPSF4-203ENST00000430038 NKX6-2Q9C056 277 aaPredicted RBP11.29□□□□□ -0.6
CPSF4-203ENST00000430038 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
CPSF4-203ENST00000430038 PAGE4O60829 102 aa11.28□□□□□ -0.6
CPSF4-203ENST00000430038 RPL19P84098 196 aaKnown RBP11.28□□□□□ -0.6
CPSF4-203ENST00000430038 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
CPSF4-203ENST00000430038 FRZBQ92765 325 aa11.28□□□□□ -0.6
CPSF4-203ENST00000430038 A0A1B0GV50 99 aa11.27□□□□□ -0.61
CPSF4-203ENST00000430038 M0R381 172 aa11.27□□□□□ -0.61
CPSF4-203ENST00000430038 LINC01620Q4KN68 170 aa11.27□□□□□ -0.61
CPSF4-203ENST00000430038 TMEM70Q9BUB7 260 aa11.27□□□□□ -0.61
CPSF4-203ENST00000430038 UBE2G1P62253 170 aa11.26□□□□□ -0.61
CPSF4-203ENST00000430038 RGS21Q2M5E4 152 aa11.26□□□□□ -0.61
CPSF4-203ENST00000430038 NIT1Q86X76 327 aa11.26□□□□□ -0.61
CPSF4-203ENST00000430038 KCNRGQ8N5I3 272 aa11.26□□□□□ -0.61
CPSF4-203ENST00000430038 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
CPSF4-203ENST00000430038 BAALCQ8WXS3 180 aa11.26□□□□□ -0.61
CPSF4-203ENST00000430038 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
CPSF4-203ENST00000430038 SYT8Q8NBV8 401 aa11.25□□□□□ -0.61
CPSF4-203ENST00000430038 MLST8Q9BVC4 326 aa11.25□□□□□ -0.61
CPSF4-203ENST00000430038 BOLA1Q9Y3E2 137 aa11.25□□□□□ -0.61
CPSF4-203ENST00000430038 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-203ENST00000430038 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
CPSF4-203ENST00000430038 TPT1P13693 172 aaKnown RBP11.24□□□□□ -0.61
CPSF4-203ENST00000430038 Q6ZSA8 131 aa11.24□□□□□ -0.61
CPSF4-203ENST00000430038 SFT2D1Q8WV19 159 aa11.24□□□□□ -0.61
CPSF4-203ENST00000430038 TM2D2Q9BX73 214 aa11.24□□□□□ -0.61
CPSF4-203ENST00000430038 A0A087WWC5 75 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 TRAV8-3A0A0A6YYJ7 113 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 RHODO00212 210 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 AKR1C3P42330 323 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 UBE2D3P61077 147 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 UBE2D2P62837 147 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 FAM213BQ8TBF2 198 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 KLK12Q9UKR0 248 aa11.23□□□□□ -0.61
CPSF4-203ENST00000430038 SEC11BP0C7V7 166 aa11.22□□□□□ -0.61
CPSF4-203ENST00000430038 CCL20P78556 96 aa11.21□□□□□ -0.61
CPSF4-203ENST00000430038 ZNF345Q14585 488 aa11.21□□□□□ -0.61
CPSF4-203ENST00000430038 ZFP82Q8N141 532 aa11.21□□□□□ -0.61
CPSF4-203ENST00000430038 STOML3Q8TAV4 291 aa11.21□□□□□ -0.61
CPSF4-203ENST00000430038 TCEAL7Q9BRU2 100 aa11.21□□□□□ -0.61
CPSF4-203ENST00000430038 FAM229AH3BQW9 127 aa11.2□□□□□ -0.62
CPSF4-203ENST00000430038 C1QBP02746 253 aa11.2□□□□□ -0.62
CPSF4-203ENST00000430038 PRR27Q6MZM9 219 aa11.2□□□□□ -0.62
CPSF4-203ENST00000430038 NEXN-AS1Q8NBZ9 246 aa11.2□□□□□ -0.62
CPSF4-203ENST00000430038 SSBP4Q9BWG4 385 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-203ENST00000430038 TRBV7-3A0A075B6L6 115 aa11.19□□□□□ -0.62
CPSF4-203ENST00000430038 HMSDA8MTL9 139 aa11.19□□□□□ -0.62
CPSF4-203ENST00000430038 BAGE2Q86Y30 109 aa11.19□□□□□ -0.62
CPSF4-203ENST00000430038 OR10G8Q8NGN5 311 aa11.19□□□□□ -0.62
CPSF4-203ENST00000430038 UBE2WQ96B02 151 aa11.19□□□□□ -0.62
CPSF4-203ENST00000430038 DERL1Q9BUN8 251 aa11.19□□□□□ -0.62
CPSF4-203ENST00000430038 KIF25-AS1Q9Y6Z4 181 aa11.19□□□□□ -0.62
CPSF4-203ENST00000430038 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
CPSF4-203ENST00000430038 TRBV10-1A0A0K0K1A3 114 aa11.18□□□□□ -0.62
CPSF4-203ENST00000430038 SNAI2O43623 268 aa11.18□□□□□ -0.62
CPSF4-203ENST00000430038 SSTP61278 116 aa11.18□□□□□ -0.62
CPSF4-203ENST00000430038 ATRAIDQ6UW56 229 aa11.18□□□□□ -0.62
CPSF4-203ENST00000430038 ENHOQ6UWT2 76 aa11.18□□□□□ -0.62
CPSF4-203ENST00000430038 TMUB2Q71RG4 321 aa11.18□□□□□ -0.62
CPSF4-203ENST00000430038 ZNF471Q9BX82 626 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-203ENST00000430038 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
CPSF4-203ENST00000430038 BCL2L11O43521 198 aa11.17□□□□□ -0.62
CPSF4-203ENST00000430038 RAB4BP61018 213 aa11.17□□□□□ -0.62
CPSF4-203ENST00000430038 RPL36AP83881 106 aaKnown RBP11.17□□□□□ -0.62
CPSF4-203ENST00000430038 TOR2AQ5JU69 321 aa11.17□□□□□ -0.62
CPSF4-203ENST00000430038 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
CPSF4-203ENST00000430038 RPL36ALQ969Q0 106 aaKnown RBP11.17□□□□□ -0.62
CPSF4-203ENST00000430038 TRBV6-8A0A0A6YYG3 113 aa11.16□□□□□ -0.62
CPSF4-203ENST00000430038 UMAD1C9J7I0 102 aa11.16□□□□□ -0.62
CPSF4-203ENST00000430038 IGLV2-8P01709 118 aa11.16□□□□□ -0.62
CPSF4-203ENST00000430038 H2AFB1P0C5Y9 115 aa11.16□□□□□ -0.62
CPSF4-203ENST00000430038 A0A0D9SG52 128 aa11.15□□□□□ -0.62
CPSF4-203ENST00000430038 S100A9P06702 114 aaKnown RBP11.15□□□□□ -0.62
CPSF4-203ENST00000430038 CXCL1P09341 107 aa11.15□□□□□ -0.62
CPSF4-203ENST00000430038 GZMBP10144 247 aa11.15□□□□□ -0.62
CPSF4-203ENST00000430038 RPL35P42766 123 aaKnown RBP11.15□□□□□ -0.62
CPSF4-203ENST00000430038 ZNF56Q15929 161 aa11.15□□□□□ -0.62
CPSF4-203ENST00000430038 MPV17L2Q567V2 206 aa11.15□□□□□ -0.62
CPSF4-203ENST00000430038 URGCP-MRPS24S4R325 110 aa11.15□□□□□ -0.62
CPSF4-203ENST00000430038 A0A087WX48 190 aa11.14□□□□□ -0.63
CPSF4-203ENST00000430038 RBFOX3A6NFN3 312 aa11.14□□□□□ -0.63
CPSF4-203ENST00000430038 OR5AL1P0C617 328 aa11.14□□□□□ -0.63
CPSF4-203ENST00000430038 KRTAP10-4P60372 401 aaPredicted RBP11.14□□□□□ -0.63
CPSF4-203ENST00000430038 SCXQ7RTU7 201 aa11.14□□□□□ -0.63
CPSF4-203ENST00000430038 LINC00528Q8N1L1 170 aa11.14□□□□□ -0.63
CPSF4-203ENST00000430038 TMEM262E9PQX1 116 aa11.13□□□□□ -0.63
CPSF4-203ENST00000430038 Q8N976 141 aa11.13□□□□□ -0.63
CPSF4-203ENST00000430038 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
CPSF4-203ENST00000430038 COX11Q9Y6N1 276 aa11.13□□□□□ -0.63
CPSF4-203ENST00000430038 KANTRA0A1W2PQU2 76 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms