RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 BPESC1Q9GZL8 116 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 TMEM160Q9NX00 188 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 ZNF580Q9UK33 172 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 SOCS3O14543 225 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 ZNF207O43670 478 aaKnown RBP6.59□□□□□ -1.35
GABPB1-205ENST00000429662 GAS8-AS1O95177 125 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 IGHG2P01859 326 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 GATA1P15976 413 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-205ENST00000429662 SUMO2P61956 95 aaKnown RBP6.59□□□□□ -1.35
GABPB1-205ENST00000429662 FOXE3Q13461 319 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 PAPPA-AS1Q5QFB9 102 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 NEGR1Q7Z3B1 354 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 GTSCR1Q86UQ5 136 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 ZFAND2AQ8N6M9 145 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 FAM19A4Q96LR4 140 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 MRPL35Q9NZE8 188 aaKnown RBP6.59□□□□□ -1.35
GABPB1-205ENST00000429662 PHLDA3Q9Y5J5 127 aa6.59□□□□□ -1.35
GABPB1-205ENST00000429662 IGKV2D-26A0A0A0MRZ7 120 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 TRAV40A0A0B4J280 105 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 LINC01548A6NM66 108 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 G3V4G9 280 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 H3BVH4 76 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 K7EMT4 169 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 ID1P41134 155 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 SCGB3A1Q96QR1 104 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 JMJD8Q96S16 334 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 PIMREGQ9BSJ6 248 aa6.58□□□□□ -1.36
GABPB1-205ENST00000429662 CHTOPQ9Y3Y2 248 aaKnown RBP6.58□□□□□ -1.36
GABPB1-205ENST00000429662 IGHV3OR16-13A0A075B7E8 117 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 IGHV3-74A0A0B4J1X5 117 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 OR11H12B2RN74 326 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 NXPH4O95158 308 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 NEXN-AS1Q8NBZ9 246 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 OR11H1Q8NG94 326 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 OR11H2Q8NH07 326 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 RAB37Q96AX2 223 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 C20orf173Q96LM9 149 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 IGHV4OR15-8A0A075B7B6 117 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 A0A087WW49 117 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 IGHV3-49A0A0A0MS15 119 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 MYMXA0A1B0GTQ4 84 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 A6NDX4 124 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 E9PLD3 99 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 F8W1H4 67 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 FXYD2P54710 66 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 MAPK1IP1LQ8NDC0 245 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 PHLDA1Q8WV24 401 aaPredicted RBP6.57□□□□□ -1.36
GABPB1-205ENST00000429662 RASL10AQ92737 203 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 ODF3Q96PU9 254 aa6.57□□□□□ -1.36
GABPB1-205ENST00000429662 TRAV26-2A0A0B4J265 109 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 TMEM238LA0A1B0GVL6 79 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 A0A1B0GWB2 263 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 TMEM89A2RUT3 159 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 J3QR89 54 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 HERVK_113P61574 105 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 ANXA2RQ3ZCQ2 193 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 PRR9Q5T870 116 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 Q6ZS46 218 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 GPHB5Q86YW7 130 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 HIST1H4GQ99525 98 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 CSTL1Q9H114 145 aa6.56□□□□□ -1.36
GABPB1-205ENST00000429662 IGLL5B9A064 214 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 IGHV4-39P01824 125 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 RNASE4P34096 147 aaKnown RBP6.55□□□□□ -1.36
GABPB1-205ENST00000429662 TCTAP57738 103 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 C21orf62-AS1Q17RA5 79 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 C12orf74Q32Q52 190 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 C2orf66Q6UXQ4 117 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 UNQ9165/PRO28630Q6UXU0 137 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 FOXI2Q6ZQN5 318 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 TMEM219Q86XT9 240 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 RHPN1-AS1Q9BWJ2 59 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 DAZ1Q9NQZ3 744 aaKnown RBP6.55□□□□□ -1.36
GABPB1-205ENST00000429662 NHP2Q9NX24 153 aaKnown RBP6.55□□□□□ -1.36
GABPB1-205ENST00000429662 CYSLTR1Q9Y271 337 aa6.55□□□□□ -1.36
GABPB1-205ENST00000429662 TRBV7-3A0A075B6L6 115 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 KLLNB2CW77 178 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 VCYO14598 125 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 MGPP08493 103 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 GATA3P23771 443 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 RPL11P62913 178 aaKnown RBP6.54□□□□□ -1.36
GABPB1-205ENST00000429662 TM4SF20Q53R12 229 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 HIST2H2BDQ6DRA6 164 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 CLEC2AQ6UVW9 174 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 FAM159AQ6UWV7 190 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 C14orf178Q8N769 122 aaPredicted RBP6.54□□□□□ -1.36
GABPB1-205ENST00000429662 MAPKAPK5-AS1Q8N8E1 139 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 C10orf105Q8TEF2 133 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 BAALCQ8WXS3 180 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 ZNF479Q96JC4 524 aa6.54□□□□□ -1.36
GABPB1-205ENST00000429662 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
GABPB1-205ENST00000429662 A0A096LNT2 108 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 TRBV6-5A0A0K0K1A5 114 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 PRSS29PA6NIE9 313 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 PF4V1P10720 104 aa6.53□□□□□ -1.36
GABPB1-205ENST00000429662 RNASE3P12724 160 aaKnown RBP6.53□□□□□ -1.36
GABPB1-205ENST00000429662 DSCR9P59020 149 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms