RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 BLCAPP62952 87 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 HIGD2AQ9BW72 106 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 TPSG1Q9NRR2 321 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 MGAMO43451 1857 aa4.45□□□□□ -1.7
HERC4-206ENST00000427635 WDR86Q86TI4 376 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 TRAV1-1A0A0B4J248 108 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 SMIM27A0A1W2PRY6 76 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 H0YGX0 51 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 BAALC-AS2P0C853 105 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 COX7BP24311 80 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 PCNX1Q96RV3 2341 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 COLCA2A8K830 154 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 FGF23Q9GZV9 251 aaPredicted RBP4.44□□□□□ -1.7
HERC4-206ENST00000427635 SND1-IT1Q9HBX3 110 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 X6R8D5 127 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 SPG11Q96JI7 2443 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 K7EP34 96 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 LINC01561Q8N1V8 128 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 LINC00474Q9P2X8 69 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 PRO1854Q9UHT4 67 aa4.44□□□□□ -1.7
HERC4-206ENST00000427635 MIFP14174 115 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 IGFL2Q6UWQ7 119 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 HIST1H2BLQ99880 126 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 TP53BP1Q12888 1972 aaPredicted RBP4.43□□□□□ -1.7
HERC4-206ENST00000427635 MUSTN1Q8IVN3 82 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 ZNF491Q8N8L2 437 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 LINC01545Q5VT33 79 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 YLPM1P49750 1951 aaKnown RBP4.43□□□□□ -1.7
HERC4-206ENST00000427635 DOCK3Q8IZD9 2030 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 IGKV1D-37A0A075B6S9 117 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 HLA-DMBP28068 263 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 Q6YL49 198 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 LINC00336Q6ZUF6 198 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 SPTSSBQ8NFR3 76 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 PRR15LQ9BU68 103 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 CYTL1Q9NRR1 136 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 CCDC179H3BU77 68 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 J3QL48 77 aa4.43□□□□□ -1.7
HERC4-206ENST00000427635 TRBV10-2A0A0K0K1G8 114 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 PRB2P02812 416 aaPredicted RBP4.42□□□□□ -1.7
HERC4-206ENST00000427635 C9orf85Q96MD7 179 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 CACNA1IQ9P0X4 2223 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 TRBV12-3P01733 135 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 IGLC1P0CG04 106 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 CRIPAKQ8N1N5 446 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 TSC2P49815 1807 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 IGHV7-81A0A0B4J1V7 117 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 IGLC6P0CF74 106 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
HERC4-206ENST00000427635 DIAPH2-AS1Q14236 149 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 WFDC11Q8NEX6 87 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 F8VRH5 84 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 UFSP1Q6NVU6 142 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 COX8CQ7Z4L0 72 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 Q8N9W7 124 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 A6NDX4 124 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 LHFPL1Q86WI0 220 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 MAP6D1Q9H9H5 199 aa4.42□□□□□ -1.7
HERC4-206ENST00000427635 CEND1Q8N111 149 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 CDIP1Q9H305 208 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 CTSZQ9UBR2 303 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 DIDO1Q9BTC0 2240 aaKnown RBP4.41□□□□□ -1.7
HERC4-206ENST00000427635 C15orf65H3BRN8 121 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 ACYP1P07311 99 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 ARTNQ5T4W7 220 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 C11orf52Q96A22 123 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 SPATA12Q7Z6I5 190 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 J3QRE1 110 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 THSD7BQ9C0I4 1608 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 A0A0G2JRQ6 117 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 JMJD7-PLA2G4BH0Y9G9 81 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 TNFRSF13BO14836 293 aaPredicted RBP4.41□□□□□ -1.7
HERC4-206ENST00000427635 REG3AQ06141 175 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 FHL3Q13643 280 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 FAM222AQ5U5X8 452 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 Q9UF83 564 aa4.41□□□□□ -1.7
HERC4-206ENST00000427635 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 Q8N976 141 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 PPDPFLQ8WWR9 84 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 NYNRINQ9P2P1 1898 aaKnown RBP4.4□□□□□ -1.7
HERC4-206ENST00000427635 ESPL1Q14674 2120 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 TCL1BO95988 128 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 QRFPP83859 136 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 WT1-ASQ06250 92 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 LINC00528Q8N1L1 170 aa4.4□□□□□ -1.7
HERC4-206ENST00000427635 A0A096LNI7 61 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 LOC107984640A0A0U1RRK4 108 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 FAM236AA0A1B0GUQ0 79 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 FAM236BA0A1B0GV22 79 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 MED14OSP0DP75 135 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 U3KQK5 164 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 KMT2EQ8IZD2 1858 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 ASCC3Q8N3C0 2202 aaKnown RBP4.4□□□□□ -1.71
HERC4-206ENST00000427635 F8W1H4 67 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 C3orf79P0CE67 100 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 PSMB8P28062 276 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.71
HERC4-206ENST00000427635 LGALS9CQ6DKI2 356 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms