RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 E7EUB6 86 aa4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 H3BS24 57 aa4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 POLR2KP53803 58 aaKnown RBP4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 TSPEAR-AS2P59090 65 aa4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 C1orf158Q8N1D5 194 aa4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 MBD3L2Q8NHZ7 208 aaPredicted RBP4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 C16orf92Q96LL3 132 aa4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 RPP25Q9BUL9 199 aaKnown RBP4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 UBL5Q9BZL1 73 aa4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 C11orf68Q9H3H3 251 aaKnown RBP4.22□□□□□ -1.73
VTI1BP4-201ENST00000427516 HEATR1Q9H583 2144 aaKnown RBP4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 IGLV11-55A0A075B6I3 123 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 NDUFA1O15239 70 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 NBR2O15453 112 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 SPRY3O43610 288 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 ZNF883P0CG24 379 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 IGHV1-8P0DP01 117 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 CCL5P13501 91 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 RNASE4P34096 147 aaKnown RBP4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 CFHR3Q02985 330 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 TFF2Q03403 129 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 KLKP1Q107X0 134 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 GFRALQ6UXV0 394 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 C10orf105Q8TEF2 133 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 KAAG1Q9UBP8 84 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 ESPL1Q14674 2120 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 ABCA7Q8IZY2 2146 aa4.21□□□□□ -1.74
VTI1BP4-201ENST00000427516 UNC13CQ8NB66 2214 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 LYRM9A8MSI8 78 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 F5H697 171 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 M0R1W7 72 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 GAS8-AS1O95177 125 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 CRPP02741 224 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 CD28P10747 220 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 HIST2H2BCQ6DN03 193 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 HIST2H2BDQ6DRA6 164 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 LINC00336Q6ZUF6 198 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 C14orf178Q8N769 122 aaPredicted RBP4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 C20orf203Q8NBC4 194 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 FAM110DQ8TAY7 271 aaPredicted RBP4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 EEF1AKMT3Q96AZ1 226 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 PKIGQ9Y2B9 76 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 UBE2D4Q9Y2X8 147 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 FER1L5A0AVI2 2057 aa4.2□□□□□ -1.74
VTI1BP4-201ENST00000427516 IGHV3-21A0A0B4J1V1 117 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 PINLYPA6NC86 204 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 ZNHIT1O43257 154 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 ERC2-IT1O76042 136 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 TSHBP01222 138 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 TFF1P04155 84 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 PDE6GP18545 87 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 XCL1P47992 114 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 CD164Q04900 197 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 CNEP1R1Q8N9A8 125 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 NPBQ8NG41 125 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 RPL39LQ96EH5 51 aaKnown RBP4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 LITAFQ99732 161 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 XCL2Q9UBD3 114 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 MOB4Q9Y3A3 225 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 ZNF407Q9C0G0 2248 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 A0A0C4DFX4 3053 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 PCNTO95613 3336 aa4.19□□□□□ -1.74
VTI1BP4-201ENST00000427516 TRBV7-6A0A0J9YX20 115 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 PLAC8L1A1L4L8 177 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 BUB1B-PAK6H3BSN5 160 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 IGHV1-46P01743 117 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 RPL28P46779 137 aaKnown RBP4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 BLCAPP62952 87 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 RBM3P98179 157 aaKnown RBP4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 MRGPRG-AS1Q2M3A8 158 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 SPINK14Q6IE38 97 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 GPHB5Q86YW7 130 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 PRR15Q8IV56 129 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 DEFB108BQ8NET1 73 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 OBSCN-AS1Q96MR7 158 aa4.18□□□□□ -1.74
VTI1BP4-201ENST00000427516 EP400Q96L91 3159 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 DIDO1Q9BTC0 2240 aaKnown RBP4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 SRCAPQ6ZRS2 3230 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 IGLV4-3A0A075B6K6 122 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 IGHV3OR16-10A0A075B7F0 116 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 TRAV12-3A0A0B4J271 114 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 A0A0U1RQV1 116 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 TMEM178BH3BS89 294 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 M0R1B8 84 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 IGLV1-47P01700 117 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 CCKP06307 115 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 CCL3L1P16619 93 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 FHL2Q14192 279 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 KLK9Q2XQG4 91 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 SUMO4Q6EEV6 95 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 C20orf197Q8N268 126 aa4.17□□□□□ -1.74
VTI1BP4-201ENST00000427516 MDS2Q8NDY4 140 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms