RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 SYT8Q8NBV8 401 aa15.99■□□□□ 0.15
CNEP1R1-202ENST00000427478 TMEM158Q8WZ71 300 aa15.99■□□□□ 0.15
CNEP1R1-202ENST00000427478 IFI27L1Q96BM0 104 aa15.99■□□□□ 0.15
CNEP1R1-202ENST00000427478 KRTAP10-3P60369 221 aa15.98■□□□□ 0.15
CNEP1R1-202ENST00000427478 SUMO2P61956 95 aaKnown RBP15.98■□□□□ 0.15
CNEP1R1-202ENST00000427478 hDV102S1A0JD36 115 aa15.98■□□□□ 0.15
CNEP1R1-202ENST00000427478 IGLC3P0DOY3 106 aa15.98■□□□□ 0.15
CNEP1R1-202ENST00000427478 SETD2Q9BYW2 2564 aaPredicted RBP15.97■□□□□ 0.15
CNEP1R1-202ENST00000427478 NOTCH2Q04721 2471 aa15.97■□□□□ 0.15
CNEP1R1-202ENST00000427478 LAGE3Q14657 143 aa15.97■□□□□ 0.15
CNEP1R1-202ENST00000427478 OR11H12B2RN74 326 aa15.97■□□□□ 0.15
CNEP1R1-202ENST00000427478 FAM74A4Q5TZK3 123 aa15.97■□□□□ 0.15
CNEP1R1-202ENST00000427478 C20orf78Q9BR46 151 aa15.97■□□□□ 0.15
CNEP1R1-202ENST00000427478 SUMO4Q6EEV6 95 aa15.96■□□□□ 0.15
CNEP1R1-202ENST00000427478 PRM2P04554 102 aa15.95■□□□□ 0.14
CNEP1R1-202ENST00000427478 UQCR10Q9UDW1 63 aa15.95■□□□□ 0.14
CNEP1R1-202ENST00000427478 F5H697 171 aa15.95■□□□□ 0.14
CNEP1R1-202ENST00000427478 STHQ8IWL8 128 aa15.95■□□□□ 0.14
CNEP1R1-202ENST00000427478 SETXQ7Z333 2677 aaKnown RBP15.95■□□□□ 0.14
CNEP1R1-202ENST00000427478 ZNF876PQ49A33 203 aa15.94■□□□□ 0.14
CNEP1R1-202ENST00000427478 INSP01308 110 aa15.94■□□□□ 0.14
CNEP1R1-202ENST00000427478 PPP1R17O96001 155 aa15.93■□□□□ 0.14
CNEP1R1-202ENST00000427478 LGALS9BQ3B8N2 356 aa15.93■□□□□ 0.14
CNEP1R1-202ENST00000427478 LGALS9CQ6DKI2 356 aa15.93■□□□□ 0.14
CNEP1R1-202ENST00000427478 NDUFA11Q86Y39 141 aa15.93■□□□□ 0.14
CNEP1R1-202ENST00000427478 HSBP1L1C9JCN9 74 aa15.92■□□□□ 0.14
CNEP1R1-202ENST00000427478 EREGO14944 169 aa15.92■□□□□ 0.14
CNEP1R1-202ENST00000427478 NUDT3O95989 172 aa15.92■□□□□ 0.14
CNEP1R1-202ENST00000427478 IGLV1-51P01701 117 aa15.92■□□□□ 0.14
CNEP1R1-202ENST00000427478 ZNF56Q15929 161 aa15.92■□□□□ 0.14
CNEP1R1-202ENST00000427478 CLUHP3Q96NS8 147 aa15.92■□□□□ 0.14
CNEP1R1-202ENST00000427478 LINC01587Q99440 93 aa15.92■□□□□ 0.14
CNEP1R1-202ENST00000427478 GOLT1BQ9Y3E0 138 aa15.92■□□□□ 0.14
CNEP1R1-202ENST00000427478 CRYGDP07320 174 aa15.91■□□□□ 0.14
CNEP1R1-202ENST00000427478 Q6ZN92 141 aa15.91■□□□□ 0.14
CNEP1R1-202ENST00000427478 CSTL1Q9H114 145 aa15.91■□□□□ 0.14
CNEP1R1-202ENST00000427478 XCL2Q9UBD3 114 aa15.91■□□□□ 0.14
CNEP1R1-202ENST00000427478 TRPT1Q86TN4 253 aaKnown RBP15.91■□□□□ 0.14
CNEP1R1-202ENST00000427478 NEGR1Q7Z3B1 354 aa15.9■□□□□ 0.14
CNEP1R1-202ENST00000427478 SNHG12Q9BXW3 62 aa15.9■□□□□ 0.14
CNEP1R1-202ENST00000427478 ST20Q9HBF5 79 aa15.9■□□□□ 0.14
CNEP1R1-202ENST00000427478 FOSL1P15407 271 aa15.89■□□□□ 0.13
CNEP1R1-202ENST00000427478 ZNF415Q09FC8 603 aa15.89■□□□□ 0.13
CNEP1R1-202ENST00000427478 ORMDL2Q53FV1 153 aa15.89■□□□□ 0.13
CNEP1R1-202ENST00000427478 PF4P02776 101 aa15.88■□□□□ 0.13
CNEP1R1-202ENST00000427478 HNRNPA3P51991 378 aaKnown RBP15.88■□□□□ 0.13
CNEP1R1-202ENST00000427478 DKK2Q9UBU2 259 aa15.88■□□□□ 0.13
CNEP1R1-202ENST00000427478 M0R143 59 aa15.87■□□□□ 0.13
CNEP1R1-202ENST00000427478 ATP5LO75964 103 aa15.87■□□□□ 0.13
CNEP1R1-202ENST00000427478 PRSS1P07477 247 aa15.87■□□□□ 0.13
CNEP1R1-202ENST00000427478 WFDC10AQ9H1F0 79 aa15.87■□□□□ 0.13
CNEP1R1-202ENST00000427478 TP73-AS1Q9UF72 201 aa15.87■□□□□ 0.13
CNEP1R1-202ENST00000427478 K7EMI3 77 aa15.86■□□□□ 0.13
CNEP1R1-202ENST00000427478 LINC00467Q9BRT7 94 aa15.86■□□□□ 0.13
CNEP1R1-202ENST00000427478 NSD1Q96L73 2696 aaPredicted RBP15.86■□□□□ 0.13
CNEP1R1-202ENST00000427478 CRLF1O75462 422 aa15.86■□□□□ 0.13
CNEP1R1-202ENST00000427478 TMEM208Q9BTX3 173 aa15.86■□□□□ 0.13
CNEP1R1-202ENST00000427478 M0R2P5 195 aa15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 CMC4P56277 68 aaPredicted RBP15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 FN1P02751 2386 aaKnown RBP15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 IGHV3OR16-12A0A075B7B8 117 aa15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 M0QY20 66 aa15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 BEAN1Q3B7T3 259 aa15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 MORN3Q6PF18 240 aaPredicted RBP15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 C11orf72Q8NBR9 251 aa15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 DEFB104AQ8WTQ1 72 aa15.85■□□□□ 0.13
CNEP1R1-202ENST00000427478 POLR2KP53803 58 aaKnown RBP15.84■□□□□ 0.13
CNEP1R1-202ENST00000427478 NUTF2P61970 127 aaKnown RBP15.84■□□□□ 0.13
CNEP1R1-202ENST00000427478 RPL32P62910 135 aaKnown RBP15.84■□□□□ 0.13
CNEP1R1-202ENST00000427478 ODF1Q14990 250 aa15.84■□□□□ 0.13
CNEP1R1-202ENST00000427478 C1orf158Q8N1D5 194 aa15.84■□□□□ 0.13
CNEP1R1-202ENST00000427478 LINC00482Q8N8I6 264 aa15.84■□□□□ 0.13
CNEP1R1-202ENST00000427478 IGHV3-73A0A0B4J1V6 119 aa15.83■□□□□ 0.13
CNEP1R1-202ENST00000427478 SDHAF1A6NFY7 115 aa15.83■□□□□ 0.13
CNEP1R1-202ENST00000427478 TOMM6Q96B49 74 aa15.83■□□□□ 0.13
CNEP1R1-202ENST00000427478 HIVEP1P15822 2718 aa15.83■□□□□ 0.12
CNEP1R1-202ENST00000427478 LBHQ53QV2 105 aaPredicted RBP15.83■□□□□ 0.12
CNEP1R1-202ENST00000427478 C2orf88Q9BSF0 95 aa15.83■□□□□ 0.12
CNEP1R1-202ENST00000427478 C19orf73Q9NVV2 129 aa15.83■□□□□ 0.12
CNEP1R1-202ENST00000427478 TRBV6-5A0A0K0K1A5 114 aa15.82■□□□□ 0.12
CNEP1R1-202ENST00000427478 C2orf66Q6UXQ4 117 aa15.82■□□□□ 0.12
CNEP1R1-202ENST00000427478 AZU1P20160 251 aa15.82■□□□□ 0.12
CNEP1R1-202ENST00000427478 STPG4Q8N801 248 aa15.82■□□□□ 0.12
CNEP1R1-202ENST00000427478 NIPBLQ6KC79 2804 aaeCLIP15.81■□□□□ 0.12
CNEP1R1-202ENST00000427478 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.81■□□□□ 0.12
CNEP1R1-202ENST00000427478 VCYO14598 125 aa15.81■□□□□ 0.12
CNEP1R1-202ENST00000427478 ANKRD39Q53RE8 183 aa15.81■□□□□ 0.12
CNEP1R1-202ENST00000427478 MRPL52Q86TS9 123 aaKnown RBP15.81■□□□□ 0.12
CNEP1R1-202ENST00000427478 SCGB3A1Q96QR1 104 aa15.81■□□□□ 0.12
CNEP1R1-202ENST00000427478 FAM110AQ9BQ89 295 aa15.81■□□□□ 0.12
CNEP1R1-202ENST00000427478 NACAE9PAV3 2078 aa15.81■□□□□ 0.12
CNEP1R1-202ENST00000427478 TCTAP57738 103 aa15.8■□□□□ 0.12
CNEP1R1-202ENST00000427478 MRPL16Q9NX20 251 aaKnown RBP15.8■□□□□ 0.12
CNEP1R1-202ENST00000427478 A8MWV9 139 aa15.8■□□□□ 0.12
CNEP1R1-202ENST00000427478 BATFQ16520 125 aa15.8■□□□□ 0.12
CNEP1R1-202ENST00000427478 KIR2DL4Q99706 377 aa15.8■□□□□ 0.12
CNEP1R1-202ENST00000427478 RPL35AP18077 110 aaKnown RBP15.79■□□□□ 0.12
CNEP1R1-202ENST00000427478 SLC25A34Q6PIV7 304 aa15.79■□□□□ 0.12
CNEP1R1-202ENST00000427478 ZFP2Q6ZN57 461 aa15.79■□□□□ 0.12
CNEP1R1-202ENST00000427478 SPXQ9BT56 116 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms