RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SLC25A20O43772 301 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 DPM2O94777 84 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 IL4P05112 153 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 COX6A1P12074 109 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 SLC25A16P16260 332 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 EDDM3BP56851 147 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 KISS1Q15726 138 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 LINC01620Q4KN68 170 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 LYRM7Q5U5X0 104 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 OR8A1Q8NGG7 326 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 NT5CQ8TCD5 201 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 TRGV9Q99603 122 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 MGST2Q99735 147 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 SLC25A2Q9BXI2 301 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 MRPL20Q9BYC9 149 aaKnown RBP1.94□□□□□ -2.1
LINC01040-201ENST00000425048 DPH3P1Q9H4G8 78 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 ZNF442Q9H7R0 627 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 CALYQ9NYX4 217 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 LINC00527Q9UJ94 153 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 U3KQK5 164 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 CEP350Q5VT06 3117 aa1.94□□□□□ -2.1
LINC01040-201ENST00000425048 KNTC1P50748 2209 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 TRAV12-2A0A075B6T6 113 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 IGKV1D-43A0A0B4J1Z2 117 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 TRAV13-1A0A0B4J241 112 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 PIGBOS1A0A0B4J2F0 54 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 IGKV1-8A0A0C4DH67 115 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 IGKV1-6A0A0C4DH72 117 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 NDUFC2-KCTD14E9PQ53 114 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 H3BMM0 161 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 PEX7O00628 323 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 CXCL13O43927 109 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 CRYGSP22914 178 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 CXCL5P42830 114 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 CCL11P51671 97 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 GFERP55789 205 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 FKBP1AP62942 108 aaKnown RBP1.93□□□□□ -2.1
LINC01040-201ENST00000425048 CD164Q04900 197 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 ZNF56Q15929 161 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 TMEM155Q4W5P6 130 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 TMEM170BQ5T4T1 132 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 MIC13Q5XKP0 118 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 FP248Q71RG6 208 aaPredicted RBP1.93□□□□□ -2.1
LINC01040-201ENST00000425048 PDPNQ86YL7 162 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 DRAM1Q8N682 238 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 C10orf105Q8TEF2 133 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 SMCR5Q8TEV8 140 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 UBE2WQ96B02 151 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 IFI27L1Q96BM0 104 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 HIST1H4GQ99525 98 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 PROK2Q9HC23 129 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 RETNQ9HD89 108 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 TMEM167BQ9NRX6 74 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 ZNF355PQ9NSJ1 428 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 ZNF492Q9P255 531 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 KLF13Q9Y2Y9 288 aaPredicted RBP1.93□□□□□ -2.1
LINC01040-201ENST00000425048 ARHGAP32A7KAX9 2087 aa1.93□□□□□ -2.1
LINC01040-201ENST00000425048 IGKV1-27A0A075B6S5 117 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 IGKV1-12A0A0C4DH73 117 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 LOC107984156A0A0G2JMH3 177 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 TRBV10-2A0A0K0K1G8 114 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 A0A0U1RQV1 116 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 TEX49A0A1B0GTD5 131 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 PGPA6NDG6 321 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 H3BVH4 76 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 H7C1H1 209 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 ATOX1O00244 68 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 UPK2O00526 184 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 IGKV1D-12P01611 117 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 HBDP02042 147 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 STATHP02808 62 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 PYYP10082 97 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 IFI27P40305 119 aaPredicted RBP1.92□□□□□ -2.1
LINC01040-201ENST00000425048 ZNF137PP52743 207 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 PMAIP1Q13794 54 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 C22orf39Q6P5X5 142 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 LINC00322Q6ZN03 302 aaPredicted RBP1.92□□□□□ -2.1
LINC01040-201ENST00000425048 MIR17HGQ75NE6 70 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 MDP1Q86V88 176 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 NDUFA11Q86Y39 141 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 ARL17AQ8IVW1 177 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 Q8N8P6 123 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 WFDC11Q8NEX6 87 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 WFDC5Q8TCV5 224 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 BMFQ96LC9 184 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 SRXN1Q9BYN0 137 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 RPP21Q9H633 154 aaKnown RBP1.92□□□□□ -2.1
LINC01040-201ENST00000425048 NXT2Q9NPJ8 142 aaKnown RBP1.92□□□□□ -2.1
LINC01040-201ENST00000425048 TAC3Q9UHF0 121 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 TIMM8BQ9Y5J9 83 aaPredicted RBP1.92□□□□□ -2.1
LINC01040-201ENST00000425048 SERP1Q9Y6X1 66 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 UNC13CQ8NB66 2214 aa1.92□□□□□ -2.1
LINC01040-201ENST00000425048 USF3Q68DE3 2245 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 ZNF407Q9C0G0 2248 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 RP1P56715 2156 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 SMIM26A0A096LP01 95 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 TRBV7-1A0A0A6YYK4 115 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 TRGV5A0A0B4J1U4 118 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 TRAV41A0A0B4J266 112 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 TRAV40A0A0B4J280 105 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms