RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LINC00527Q9UJ94 153 aa8.58□□□□□ -1.04
SEC61A1-202ENST00000424880 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
SEC61A1-202ENST00000424880 BSPH1Q075Z2 132 aa8.57□□□□□ -1.04
SEC61A1-202ENST00000424880 ZNRF2Q8NHG8 242 aa8.57□□□□□ -1.04
SEC61A1-202ENST00000424880 SPTAN1Q13813 2472 aaKnown RBP8.57□□□□□ -1.04
SEC61A1-202ENST00000424880 IGLV4-69A0A075B6H9 119 aa8.57□□□□□ -1.04
SEC61A1-202ENST00000424880 CEMP1Q6PRD7 247 aaPredicted RBP8.57□□□□□ -1.04
SEC61A1-202ENST00000424880 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
SEC61A1-202ENST00000424880 GNRH2O43555 120 aa8.56□□□□□ -1.04
SEC61A1-202ENST00000424880 NCOR2Q9Y618 2525 aa8.56□□□□□ -1.04
SEC61A1-202ENST00000424880 OOSP1A8MZH6 123 aa8.56□□□□□ -1.04
SEC61A1-202ENST00000424880 CLEC2BQ92478 149 aa8.56□□□□□ -1.04
SEC61A1-202ENST00000424880 FAM215AQ9Y5M1 114 aa8.56□□□□□ -1.04
SEC61A1-202ENST00000424880 HERVK_113P61574 105 aa8.56□□□□□ -1.04
SEC61A1-202ENST00000424880 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
SEC61A1-202ENST00000424880 CREBBPQ92793 2442 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 A0A087WWL8 130 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 IGHV3-33P01772 117 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 DYNLRB1Q9NP97 96 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 LINC00694P0DN24 101 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 C8orf31Q8N9H6 132 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 TIMD4Q96H15 378 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 PHLDA3Q9Y5J5 127 aa8.55□□□□□ -1.04
SEC61A1-202ENST00000424880 F6UB75 175 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 NBR2O15453 112 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 SLC25A29Q8N8R3 303 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 EEF1AKMT3Q96AZ1 226 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 ZNF256Q9Y2P7 627 aaPredicted RBP8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 NACAE9PAV3 2078 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 RBAKDNA6NC62 111 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 F5H697 171 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 J3QQQ9 107 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 ECSCRQ19T08 205 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 MUC4Q99102 2169 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 IGLV11-55A0A075B6I3 123 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 TRIAP1O43715 76 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 LGALS3P17931 250 aaKnown RBP8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 ZNF672Q499Z4 452 aaPredicted RBP8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
SEC61A1-202ENST00000424880 TRBV7-7A0A0K0K1E9 115 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 RNF223E7ERA6 249 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 M0R2P5 195 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 NOTCH3Q9UM47 2321 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 DOPEY2Q9Y3R5 2298 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 TRGV11A0A075B6L2 103 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 MBD3L4A6NDZ8 208 aaPredicted RBP8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 MBD3L3A6NE82 208 aaPredicted RBP8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 MBD3L5A6NJ08 208 aaPredicted RBP8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 A8MZ25 164 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 RS1O15537 224 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 P0DMU3 169 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 FAM231AP0DMU4 169 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 FAM231CP0DMU5 169 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 CLEC19AQ6UXS0 136 aa8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 MBD3L2Q8NHZ7 208 aaPredicted RBP8.53□□□□□ -1.04
SEC61A1-202ENST00000424880 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.53□□□□□ -1.041e-7■■■■□ 23.3
SEC61A1-202ENST00000424880 FAM236AA0A1B0GUQ0 79 aa8.52□□□□□ -1.04
SEC61A1-202ENST00000424880 FAM236BA0A1B0GV22 79 aa8.52□□□□□ -1.04
SEC61A1-202ENST00000424880 C15orf32Q32M92 178 aa8.52□□□□□ -1.04
SEC61A1-202ENST00000424880 TRAV12-3A0A0B4J271 114 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 CLPSL1A2RUU4 121 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 SMIM9A6NGZ8 99 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 H3BMM0 161 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 RNASE13Q5GAN3 156 aaKnown RBP8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 TMEM263Q8WUH6 116 aaKnown RBP8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 UBE2WQ96B02 151 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 C2CD3Q4AC94 2353 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 TRAV25A0A0B4J276 109 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 BUB3O43684 328 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 LRRC75A-AS1Q8N1F1 130 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 DAND5Q8N907 189 aa8.52□□□□□ -1.05
SEC61A1-202ENST00000424880 FAM240AA0A1B0GVK7 77 aa8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 LGALS9O00182 355 aa8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 RPL11P62913 178 aaKnown RBP8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 PRRC2AP48634 2157 aaKnown RBP8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 PTPRQQ9UMZ3 2332 aa8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 A0A1B0GX51 115 aa8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 RNASE4P34096 147 aaKnown RBP8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 AMELXQ99217 191 aa8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 SLC50A1Q9BRV3 221 aa8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 TLN1Q9Y490 2541 aaKnown RBP8.51□□□□□ -1.05
SEC61A1-202ENST00000424880 TRAV8-3A0A0A6YYJ7 113 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 RNASE6Q93091 150 aaKnown RBP8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 IGF2RP11717 2491 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 G3V318 75 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 UBE2E1P51965 193 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 ATXN8Q156A1 80 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 ANKHD1Q8IWZ3 2542 aaKnown RBP8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 H7C423 109 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 Q8NA96 180 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
SEC61A1-202ENST00000424880 HRNRQ86YZ3 2850 aaPredicted RBP8.49□□□□□ -1.05
SEC61A1-202ENST00000424880 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
SEC61A1-202ENST00000424880 PMVKQ15126 192 aa8.49□□□□□ -1.05
SEC61A1-202ENST00000424880 C20orf173Q96LM9 149 aa8.49□□□□□ -1.05
SEC61A1-202ENST00000424880 EBI3Q14213 229 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms