RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 Q8N3U1 123 aa10.73□□□□□ -0.69
COL18A1-205ENST00000423214 MBD3L1Q8WWY6 194 aa10.73□□□□□ -0.69
COL18A1-205ENST00000423214 URGCP-MRPS24S4R325 110 aa10.73□□□□□ -0.69
COL18A1-205ENST00000423214 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.72□□□□□ -0.69
COL18A1-205ENST00000423214 A0A087WWC5 75 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 B4DEV8 164 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 UMAD1C9J7I0 102 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 J3QL48 77 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 M0R036 132 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 LINC00694P0DN24 101 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 WFDC2Q14508 124 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 DAZ4Q86SG3 579 aaKnown RBP10.72□□□□□ -0.69
COL18A1-205ENST00000423214 SYT8Q8NBV8 401 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 FMC1Q96HJ9 113 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 DAZ3Q9NR90 486 aaKnown RBP10.72□□□□□ -0.69
COL18A1-205ENST00000423214 FAM30AQ9NZY2 134 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 DNAH8Q96JB1 4490 aa10.72□□□□□ -0.69
COL18A1-205ENST00000423214 H3BVH4 76 aa10.71□□□□□ -0.69
COL18A1-205ENST00000423214 RHODO00212 210 aa10.71□□□□□ -0.69
COL18A1-205ENST00000423214 SH2D1AO60880 128 aa10.71□□□□□ -0.69
COL18A1-205ENST00000423214 PLA2G1BP04054 148 aaKnown RBP10.71□□□□□ -0.69
COL18A1-205ENST00000423214 RMI2Q96E14 147 aa10.71□□□□□ -0.69
COL18A1-205ENST00000423214 IL36BQ9NZH7 164 aa10.71□□□□□ -0.69
COL18A1-205ENST00000423214 ZFP30Q9Y2G7 519 aa10.71□□□□□ -0.69
COL18A1-205ENST00000423214 GRIFINA4D1Z8 144 aa10.7□□□□□ -0.7
COL18A1-205ENST00000423214 H2AFB1P0C5Y9 115 aa10.7□□□□□ -0.7
COL18A1-205ENST00000423214 TPT1P13693 172 aaKnown RBP10.7□□□□□ -0.7
COL18A1-205ENST00000423214 AKR1C3P42330 323 aa10.7□□□□□ -0.7
COL18A1-205ENST00000423214 EIF5AP63241 154 aaKnown RBP10.7□□□□□ -0.7
COL18A1-205ENST00000423214 COX11Q9Y6N1 276 aa10.7□□□□□ -0.7
COL18A1-205ENST00000423214 TMSB15BA0A087X1C1 80 aa10.69□□□□□ -0.7
COL18A1-205ENST00000423214 KRBOX1C9JBD0 128 aa10.69□□□□□ -0.7
COL18A1-205ENST00000423214 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
COL18A1-205ENST00000423214 LINC00528Q8N1L1 170 aa10.69□□□□□ -0.7
COL18A1-205ENST00000423214 C14orf178Q8N769 122 aaPredicted RBP10.69□□□□□ -0.7
COL18A1-205ENST00000423214 JPT2Q9H910 190 aa10.69□□□□□ -0.7
COL18A1-205ENST00000423214 SCO2A0A1W2PP80 73 aa10.68□□□□□ -0.7
COL18A1-205ENST00000423214 LTAP01374 205 aa10.68□□□□□ -0.7
COL18A1-205ENST00000423214 ARMS2P0C7Q2 107 aa10.68□□□□□ -0.7
COL18A1-205ENST00000423214 FAM162BQ5T6X4 162 aa10.68□□□□□ -0.7
COL18A1-205ENST00000423214 Q6ZSA8 131 aa10.68□□□□□ -0.7
COL18A1-205ENST00000423214 COX8CQ7Z4L0 72 aa10.68□□□□□ -0.7
COL18A1-205ENST00000423214 SAMD10Q9BYL1 202 aa10.68□□□□□ -0.7
COL18A1-205ENST00000423214 TRBV6-1A0A0K0K1D8 114 aa10.67□□□□□ -0.7
COL18A1-205ENST00000423214 CCL20P78556 96 aa10.67□□□□□ -0.7
COL18A1-205ENST00000423214 ZNF674Q2M3X9 581 aa10.67□□□□□ -0.7
COL18A1-205ENST00000423214 DMRTA1Q5VZB9 504 aa10.67□□□□□ -0.7
COL18A1-205ENST00000423214 UFSP1Q6NVU6 142 aa10.67□□□□□ -0.7
COL18A1-205ENST00000423214 KCNIP4Q6PIL6 250 aa10.67□□□□□ -0.7
COL18A1-205ENST00000423214 BAALCQ8WXS3 180 aa10.67□□□□□ -0.7
COL18A1-205ENST00000423214 TCEAL7Q9BRU2 100 aa10.67□□□□□ -0.7
COL18A1-205ENST00000423214 IGKV2D-24A0A075B6R9 120 aa10.66□□□□□ -0.7
COL18A1-205ENST00000423214 Q6ZNX1 250 aa10.66□□□□□ -0.7
COL18A1-205ENST00000423214 TCTE3Q8IZS6 198 aa10.66□□□□□ -0.7
COL18A1-205ENST00000423214 Q9UF83 564 aa10.66□□□□□ -0.7
COL18A1-205ENST00000423214 PHLDA3Q9Y5J5 127 aa10.66□□□□□ -0.7
COL18A1-205ENST00000423214 A0A087WWL8 130 aa10.65□□□□□ -0.7
COL18A1-205ENST00000423214 A0A087WX48 190 aa10.65□□□□□ -0.7
COL18A1-205ENST00000423214 RBFOX3A6NFN3 312 aa10.65□□□□□ -0.7
COL18A1-205ENST00000423214 M0R381 172 aa10.65□□□□□ -0.7
COL18A1-205ENST00000423214 NIT1Q86X76 327 aa10.65□□□□□ -0.7
COL18A1-205ENST00000423214 KLK12Q9UKR0 248 aa10.65□□□□□ -0.7
COL18A1-205ENST00000423214 hCG_2014768A0A024R1R8 64 aa10.64□□□□□ -0.71
COL18A1-205ENST00000423214 ELOBQ15370 118 aa10.64□□□□□ -0.71
COL18A1-205ENST00000423214 LINC01620Q4KN68 170 aa10.64□□□□□ -0.71
COL18A1-205ENST00000423214 DNLZQ5SXM8 178 aa10.64□□□□□ -0.71
COL18A1-205ENST00000423214 BAGE2Q86Y30 109 aa10.64□□□□□ -0.71
COL18A1-205ENST00000423214 Q8N976 141 aa10.64□□□□□ -0.71
COL18A1-205ENST00000423214 GNG13Q9P2W3 67 aa10.64□□□□□ -0.71
COL18A1-205ENST00000423214 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
COL18A1-205ENST00000423214 RPL36AP83881 106 aaKnown RBP10.63□□□□□ -0.71
COL18A1-205ENST00000423214 RPL19P84098 196 aaKnown RBP10.63□□□□□ -0.71
COL18A1-205ENST00000423214 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
COL18A1-205ENST00000423214 SCXQ7RTU7 201 aa10.63□□□□□ -0.71
COL18A1-205ENST00000423214 ZFP82Q8N141 532 aa10.63□□□□□ -0.71
COL18A1-205ENST00000423214 RPL36ALQ969Q0 106 aaKnown RBP10.63□□□□□ -0.71
COL18A1-205ENST00000423214 UBE2WQ96B02 151 aa10.63□□□□□ -0.71
COL18A1-205ENST00000423214 CHCHD7Q9BUK0 85 aa10.63□□□□□ -0.71
COL18A1-205ENST00000423214 SULT1A2P50226 295 aa10.62□□□□□ -0.71
COL18A1-205ENST00000423214 EIF5AL1Q6IS14 154 aaKnown RBP10.62□□□□□ -0.71
COL18A1-205ENST00000423214 PRR27Q6MZM9 219 aa10.62□□□□□ -0.71
COL18A1-205ENST00000423214 DEFB104AQ8WTQ1 72 aa10.62□□□□□ -0.71
COL18A1-205ENST00000423214 SFRP2Q96HF1 295 aa10.62□□□□□ -0.71
COL18A1-205ENST00000423214 MLST8Q9BVC4 326 aa10.62□□□□□ -0.71
COL18A1-205ENST00000423214 TRBV10-1A0A0K0K1A3 114 aa10.61□□□□□ -0.71
COL18A1-205ENST00000423214 RAB5CP51148 216 aa10.61□□□□□ -0.71
COL18A1-205ENST00000423214 DNAJC30Q96LL9 226 aa10.61□□□□□ -0.71
COL18A1-205ENST00000423214 DERL1Q9BUN8 251 aa10.61□□□□□ -0.71
COL18A1-205ENST00000423214 MANBALQ9NQG1 85 aa10.61□□□□□ -0.71
COL18A1-205ENST00000423214 TRAV1-1A0A0B4J248 108 aa10.6□□□□□ -0.71
COL18A1-205ENST00000423214 CRPP02741 224 aa10.6□□□□□ -0.71
COL18A1-205ENST00000423214 RPL35P42766 123 aaKnown RBP10.6□□□□□ -0.71
COL18A1-205ENST00000423214 Q0VG73 95 aa10.6□□□□□ -0.71
COL18A1-205ENST00000423214 ZNF56Q15929 161 aa10.6□□□□□ -0.71
COL18A1-205ENST00000423214 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
COL18A1-205ENST00000423214 SSTP61278 116 aa10.59□□□□□ -0.71
COL18A1-205ENST00000423214 C14orf177Q52M58 125 aa10.59□□□□□ -0.71
COL18A1-205ENST00000423214 SLC51BQ86UW2 128 aa10.59□□□□□ -0.71
COL18A1-205ENST00000423214 C1orf43Q9BWL3 253 aa10.59□□□□□ -0.71
COL18A1-205ENST00000423214 MUC21A0A0G2JKD1 596 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms