RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 LINC00315P59091 139 aa16■□□□□ 0.15
USP48-205ENST00000421625 C10orf126Q8N4M7 172 aa16■□□□□ 0.15
USP48-205ENST00000421625 SCGB1C2P0DMR2 95 aa15.99■□□□□ 0.15
USP48-205ENST00000421625 ZNRF2Q8NHG8 242 aa15.99■□□□□ 0.15
USP48-205ENST00000421625 IGKV3-7A0A075B6H7 116 aa15.99■□□□□ 0.15
USP48-205ENST00000421625 TMEM219Q86XT9 240 aa15.99■□□□□ 0.15
USP48-205ENST00000421625 SLC25A29Q8N8R3 303 aa15.99■□□□□ 0.15
USP48-205ENST00000421625 RNF183Q96D59 192 aa15.99■□□□□ 0.15
USP48-205ENST00000421625 TRBV20-1A0A075B6N2 111 aa15.98■□□□□ 0.15
USP48-205ENST00000421625 SOCS3O14543 225 aa15.98■□□□□ 0.15
USP48-205ENST00000421625 ZNF688P0C7X2 276 aa15.98■□□□□ 0.15
USP48-205ENST00000421625 KIF25-AS1Q9Y6Z4 181 aa15.98■□□□□ 0.15
USP48-205ENST00000421625 IGHV1-69DA0A0B4J2H0 117 aa15.98■□□□□ 0.15
USP48-205ENST00000421625 OVOL1O14753 267 aa15.98■□□□□ 0.15
USP48-205ENST00000421625 PPP1R17O96001 155 aa15.97■□□□□ 0.15
USP48-205ENST00000421625 UBE2E1P51965 193 aa15.97■□□□□ 0.15
USP48-205ENST00000421625 AMELXQ99217 191 aa15.97■□□□□ 0.15
USP48-205ENST00000421625 MED14OSP0DP75 135 aa15.97■□□□□ 0.15
USP48-205ENST00000421625 PAPPA-AS1Q5QFB9 102 aa15.97■□□□□ 0.15
USP48-205ENST00000421625 PRO1854Q9UHT4 67 aa15.97■□□□□ 0.15
USP48-205ENST00000421625 RPL11P62913 178 aaKnown RBP15.96■□□□□ 0.15
USP48-205ENST00000421625 RAX2Q96IS3 184 aa15.96■□□□□ 0.15
USP48-205ENST00000421625 ACACBO00763 2458 aa15.96■□□□□ 0.15
USP48-205ENST00000421625 A0A087WWL8 130 aa15.96■□□□□ 0.15
USP48-205ENST00000421625 POLR2KP53803 58 aaKnown RBP15.96■□□□□ 0.15
USP48-205ENST00000421625 SUMO4Q6EEV6 95 aa15.96■□□□□ 0.15
USP48-205ENST00000421625 POM121L12Q8N7R1 296 aa15.96■□□□□ 0.15
USP48-205ENST00000421625 C5orf56Q8N8D9 126 aa15.96■□□□□ 0.15
USP48-205ENST00000421625 FAM19A4Q96LR4 140 aa15.96■□□□□ 0.15
USP48-205ENST00000421625 CRIP2P52943 208 aaPredicted RBP15.95■□□□□ 0.14
USP48-205ENST00000421625 CACNA1AO00555 2505 aa15.95■□□□□ 0.14
USP48-205ENST00000421625 EIF4EBP3O60516 100 aaPredicted RBP15.95■□□□□ 0.14
USP48-205ENST00000421625 ERG28Q9UKR5 140 aa15.95■□□□□ 0.14
USP48-205ENST00000421625 ADORA2A-AS1P86434 159 aa15.95■□□□□ 0.14
USP48-205ENST00000421625 J3QQQ9 107 aa15.94■□□□□ 0.14
USP48-205ENST00000421625 FBXL19-AS1Q494R0 122 aa15.94■□□□□ 0.14
USP48-205ENST00000421625 TRPT1Q86TN4 253 aaKnown RBP15.94■□□□□ 0.14
USP48-205ENST00000421625 IGHV4OR15-8A0A075B7B6 117 aa15.94■□□□□ 0.14
USP48-205ENST00000421625 A0A087WW49 117 aa15.94■□□□□ 0.14
USP48-205ENST00000421625 CFAP46Q8IYW2 2715 aa15.93■□□□□ 0.14
USP48-205ENST00000421625 TRAV41A0A0B4J266 112 aa15.93■□□□□ 0.14
USP48-205ENST00000421625 NXPH4O95158 308 aa15.93■□□□□ 0.14
USP48-205ENST00000421625 SHISA2Q6UWI4 295 aa15.93■□□□□ 0.14
USP48-205ENST00000421625 TMEM141Q96I45 108 aa15.93■□□□□ 0.14
USP48-205ENST00000421625 A4D1N5 150 aa15.92■□□□□ 0.14
USP48-205ENST00000421625 F5H697 171 aa15.92■□□□□ 0.14
USP48-205ENST00000421625 H7C2G1 150 aa15.92■□□□□ 0.14
USP48-205ENST00000421625 ZNF876PQ49A33 203 aa15.92■□□□□ 0.14
USP48-205ENST00000421625 OPRPNQ99935 248 aaPredicted RBP15.92■□□□□ 0.14
USP48-205ENST00000421625 CELSR1Q9NYQ6 3014 aa15.92■□□□□ 0.14
USP48-205ENST00000421625 C9JAW5 83 aa15.92■□□□□ 0.14
USP48-205ENST00000421625 SLC25A20O43772 301 aa15.92■□□□□ 0.14
USP48-205ENST00000421625 LGALS3P17931 250 aaKnown RBP15.92■□□□□ 0.14
USP48-205ENST00000421625 TIMM17AQ99595 171 aa15.92■□□□□ 0.14
USP48-205ENST00000421625 SDHAF1A6NFY7 115 aa15.91■□□□□ 0.14
USP48-205ENST00000421625 VCX2Q9H322 139 aa15.91■□□□□ 0.14
USP48-205ENST00000421625 VCYO14598 125 aa15.91■□□□□ 0.14
USP48-205ENST00000421625 RPL32P62910 135 aaKnown RBP15.91■□□□□ 0.14
USP48-205ENST00000421625 APRG1Q8IVJ8 170 aa15.91■□□□□ 0.14
USP48-205ENST00000421625 ANAPC13Q9BS18 74 aa15.9■□□□□ 0.14
USP48-205ENST00000421625 IGHV3-64A0A075B6Q5 118 aa15.9■□□□□ 0.14
USP48-205ENST00000421625 FAM223BA6NKX1 122 aa15.9■□□□□ 0.14
USP48-205ENST00000421625 SRD5A1P18405 259 aa15.9■□□□□ 0.14
USP48-205ENST00000421625 FAM223AQ8IWN6 122 aa15.9■□□□□ 0.14
USP48-205ENST00000421625 ZNF256Q9Y2P7 627 aaPredicted RBP15.9■□□□□ 0.14
USP48-205ENST00000421625 ZFYVE26Q68DK2 2539 aa15.89■□□□□ 0.13
USP48-205ENST00000421625 IGHV3-11P01762 117 aa15.89■□□□□ 0.13
USP48-205ENST00000421625 C19orf54Q5BKX5 351 aa15.89■□□□□ 0.13
USP48-205ENST00000421625 IGHV3OR16-10A0A075B7F0 116 aa15.89■□□□□ 0.13
USP48-205ENST00000421625 IGHV3-33P01772 117 aa15.89■□□□□ 0.13
USP48-205ENST00000421625 TRAV2A0A0B4J234 112 aa15.88■□□□□ 0.13
USP48-205ENST00000421625 NPFFO15130 113 aa15.88■□□□□ 0.13
USP48-205ENST00000421625 FAM74A4Q5TZK3 123 aa15.88■□□□□ 0.13
USP48-205ENST00000421625 NDUFA4O00483 81 aa15.88■□□□□ 0.13
USP48-205ENST00000421625 ZFAND6Q6FIF0 208 aa15.88■□□□□ 0.13
USP48-205ENST00000421625 TMEM263Q8WUH6 116 aaKnown RBP15.88■□□□□ 0.13
USP48-205ENST00000421625 MAP1AP78559 2803 aaPredicted RBP15.88■□□□□ 0.13
USP48-205ENST00000421625 ELANEP08246 267 aa15.87■□□□□ 0.13
USP48-205ENST00000421625 A0A1W2PPR1 153 aa15.86■□□□□ 0.13
USP48-205ENST00000421625 FAM159AQ6UWV7 190 aa15.86■□□□□ 0.13
USP48-205ENST00000421625 TMEM262E9PQX1 116 aa15.86■□□□□ 0.13
USP48-205ENST00000421625 TEX29Q8N6K0 151 aa15.86■□□□□ 0.13
USP48-205ENST00000421625 CITED1Q99966 193 aa15.86■□□□□ 0.13
USP48-205ENST00000421625 TRBV27A0A0K0K1C4 114 aa15.86■□□□□ 0.13
USP48-205ENST00000421625 MUSTN1Q8IVN3 82 aa15.86■□□□□ 0.13
USP48-205ENST00000421625 TMEM223A0PJW6 202 aa15.85■□□□□ 0.13
USP48-205ENST00000421625 ZNF580Q9UK33 172 aa15.85■□□□□ 0.13
USP48-205ENST00000421625 MOB4Q9Y3A3 225 aa15.85■□□□□ 0.13
USP48-205ENST00000421625 KLLNB2CW77 178 aa15.84■□□□□ 0.13
USP48-205ENST00000421625 EDN2P20800 178 aa15.84■□□□□ 0.13
USP48-205ENST00000421625 IGSF10Q6WRI0 2623 aa15.84■□□□□ 0.13
USP48-205ENST00000421625 TRAV12-3A0A0B4J271 114 aa15.84■□□□□ 0.13
USP48-205ENST00000421625 LEPROTO15243 131 aa15.84■□□□□ 0.13
USP48-205ENST00000421625 RHPN1-AS1Q9BWJ2 59 aa15.84■□□□□ 0.13
USP48-205ENST00000421625 FLNCQ14315 2725 aa15.83■□□□□ 0.13
USP48-205ENST00000421625 NTN5Q8WTR8 489 aaPredicted RBP15.83■□□□□ 0.13
USP48-205ENST00000421625 B5MCH6 92 aa15.82■□□□□ 0.12
USP48-205ENST00000421625 LGALS9O00182 355 aa15.82■□□□□ 0.12
USP48-205ENST00000421625 Q1RN00 199 aa15.82■□□□□ 0.12
USP48-205ENST00000421625 CRLF1O75462 422 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms