RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 LELP1Q5T871 98 aa10.08□□□□□ -0.8
FAM3A-209ENST00000421517 ALKAL2Q6UX46 152 aa10.08□□□□□ -0.8
FAM3A-209ENST00000421517 ATP6V0E2Q8NHE4 81 aa10.08□□□□□ -0.8
FAM3A-209ENST00000421517 DAZAP1Q96EP5 407 aaKnown RBP10.08□□□□□ -0.8
FAM3A-209ENST00000421517 A0A087WWC5 75 aa10.07□□□□□ -0.8
FAM3A-209ENST00000421517 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
FAM3A-209ENST00000421517 LINC01556Q5JQF7 62 aa10.07□□□□□ -0.8
FAM3A-209ENST00000421517 PRR27Q6MZM9 219 aa10.07□□□□□ -0.8
FAM3A-209ENST00000421517 SAMD10Q9BYL1 202 aa10.07□□□□□ -0.8
FAM3A-209ENST00000421517 PKHD1P08F94 4074 aa10.07□□□□□ -0.8
FAM3A-209ENST00000421517 TRBV20OR9-2A0A075B6H5 130 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 TMSB15BA0A087X1C1 80 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 IGHV3-73A0A0B4J1V6 119 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 IGHV3-38A0A0C4DH36 116 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 A0A1B0GVG6 124 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 RBFOX3A6NFN3 312 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 F2Z2F3 143 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 M0R381 172 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 RAB4BP61018 213 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
FAM3A-209ENST00000421517 JPT2Q9H910 190 aa10.06□□□□□ -0.8
FAM3A-209ENST00000421517 IGLC6P0CF74 106 aa10.05□□□□□ -0.8
FAM3A-209ENST00000421517 LINC00315P59091 139 aa10.05□□□□□ -0.8
FAM3A-209ENST00000421517 RPL19P84098 196 aaKnown RBP10.05□□□□□ -0.8
FAM3A-209ENST00000421517 TNP2Q05952 138 aa10.05□□□□□ -0.8
FAM3A-209ENST00000421517 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
FAM3A-209ENST00000421517 Q6ZSN1 163 aa10.05□□□□□ -0.8
FAM3A-209ENST00000421517 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
FAM3A-209ENST00000421517 OR10G8Q8NGN5 311 aa10.05□□□□□ -0.8
FAM3A-209ENST00000421517 RAB19A4D1S5 217 aa10.04□□□□□ -0.8
FAM3A-209ENST00000421517 P01737 135 aa10.04□□□□□ -0.8
FAM3A-209ENST00000421517 CACNG7P62955 275 aa10.04□□□□□ -0.8
FAM3A-209ENST00000421517 SPANXN1Q5VSR9 72 aa10.04□□□□□ -0.8
FAM3A-209ENST00000421517 OR10AG1Q8NH19 301 aa10.04□□□□□ -0.8
FAM3A-209ENST00000421517 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
FAM3A-209ENST00000421517 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 IBA57-AS1B1ANH7 110 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
FAM3A-209ENST00000421517 LAGE3Q14657 143 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 OR10J3Q5JRS4 329 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 C14orf178Q8N769 122 aaPredicted RBP10.02□□□□□ -0.81
FAM3A-209ENST00000421517 FER1L6-AS1Q8NA97 138 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 OR2D3Q8NGH3 330 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
FAM3A-209ENST00000421517 FAM210AQ96ND0 272 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 AP1S3Q96PC3 154 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 CNFNQ9BYD5 112 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 MSRB1Q9NZV6 116 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 KIF25-AS1Q9Y6Z4 181 aa10.02□□□□□ -0.81
FAM3A-209ENST00000421517 A0A087WWL8 130 aa10.01□□□□□ -0.81
FAM3A-209ENST00000421517 GAGE12JA6NER3 117 aa10.01□□□□□ -0.81
FAM3A-209ENST00000421517 NKX2-5P52952 324 aaPredicted RBP10.01□□□□□ -0.81
FAM3A-209ENST00000421517 GAGE1Q13065 139 aa10.01□□□□□ -0.81
FAM3A-209ENST00000421517 GAGE4Q13068 117 aa10.01□□□□□ -0.81
FAM3A-209ENST00000421517 GAGE5Q13069 117 aa10.01□□□□□ -0.81
FAM3A-209ENST00000421517 GAGE13Q4V321 117 aa10.01□□□□□ -0.81
FAM3A-209ENST00000421517 FAM231DQ6ZW35 169 aa10.01□□□□□ -0.81
FAM3A-209ENST00000421517 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
FAM3A-209ENST00000421517 SMIM17P0DL12 118 aa10□□□□□ -0.81
FAM3A-209ENST00000421517 UBE2D3P61077 147 aa10□□□□□ -0.81
FAM3A-209ENST00000421517 UBE2D2P62837 147 aa10□□□□□ -0.81
FAM3A-209ENST00000421517 NUDT10Q8NFP7 164 aa10□□□□□ -0.81
FAM3A-209ENST00000421517 OCC1Q8TAD7 63 aa10□□□□□ -0.81
FAM3A-209ENST00000421517 NUDT11Q96G61 164 aa10□□□□□ -0.81
FAM3A-209ENST00000421517 SMDT1Q9H4I9 107 aa10□□□□□ -0.81
FAM3A-209ENST00000421517 HERC2O95714 4834 aa10□□□□□ -0.81
FAM3A-209ENST00000421517 CTRLP40313 264 aa9.99□□□□□ -0.81
FAM3A-209ENST00000421517 TMEM97Q5BJF2 176 aa9.99□□□□□ -0.81
FAM3A-209ENST00000421517 CT83Q5H943 113 aa9.99□□□□□ -0.81
FAM3A-209ENST00000421517 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.99□□□□□ -0.81
FAM3A-209ENST00000421517 H7C1H1 209 aa9.98□□□□□ -0.81
FAM3A-209ENST00000421517 K7EN84 100 aa9.98□□□□□ -0.81
FAM3A-209ENST00000421517 TRGC1P0CF51 173 aa9.98□□□□□ -0.81
FAM3A-209ENST00000421517 FOXA3P55318 350 aaPredicted RBP9.98□□□□□ -0.81
FAM3A-209ENST00000421517 TOR2AQ5JU69 321 aa9.98□□□□□ -0.81
FAM3A-209ENST00000421517 TEX261Q6UWH6 196 aa9.98□□□□□ -0.81
FAM3A-209ENST00000421517 FRZBQ92765 325 aa9.98□□□□□ -0.81
FAM3A-209ENST00000421517 DNAJC30Q96LL9 226 aa9.98□□□□□ -0.81
FAM3A-209ENST00000421517 EIF5A2Q9GZV4 153 aaKnown RBP9.98□□□□□ -0.81
FAM3A-209ENST00000421517 RPP21Q9H633 154 aaKnown RBP9.98□□□□□ -0.81
FAM3A-209ENST00000421517 Q9UF83 564 aa9.98□□□□□ -0.81
FAM3A-209ENST00000421517 KIAA1109Q2LD37 5005 aa9.97□□□□□ -0.81
FAM3A-209ENST00000421517 EREGO14944 169 aa9.97□□□□□ -0.81
FAM3A-209ENST00000421517 ERVFC1-1P60608 527 aa9.97□□□□□ -0.81
FAM3A-209ENST00000421517 ZNF56Q15929 161 aa9.97□□□□□ -0.81
FAM3A-209ENST00000421517 CDPF1Q6NVV7 123 aa9.97□□□□□ -0.81
FAM3A-209ENST00000421517 DAZ4Q86SG3 579 aaKnown RBP9.97□□□□□ -0.81
FAM3A-209ENST00000421517 DAZ3Q9NR90 486 aaKnown RBP9.97□□□□□ -0.81
FAM3A-209ENST00000421517 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
FAM3A-209ENST00000421517 FAM231BA6NCW3 169 aa9.96□□□□□ -0.82
FAM3A-209ENST00000421517 PKIAP61925 76 aa9.96□□□□□ -0.82
FAM3A-209ENST00000421517 FAM74A3Q4VXF1 159 aa9.96□□□□□ -0.82
FAM3A-209ENST00000421517 LYZL1Q6UWQ5 148 aa9.96□□□□□ -0.82
FAM3A-209ENST00000421517 NEXN-AS1Q8NBZ9 246 aa9.96□□□□□ -0.82
FAM3A-209ENST00000421517 LRP1BQ9NZR2 4599 aa9.95□□□□□ -0.82
FAM3A-209ENST00000421517 TRAV8-3A0A0A6YYJ7 113 aa9.95□□□□□ -0.82
FAM3A-209ENST00000421517 A8MWL6 223 aa9.95□□□□□ -0.82
FAM3A-209ENST00000421517 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
FAM3A-209ENST00000421517 GZMBP10144 247 aa9.95□□□□□ -0.82
FAM3A-209ENST00000421517 NTF3P20783 257 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms