RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 C9orf66Q5T8R8 295 aa9.78□□□□□ -0.84
TMEM50B-201ENST00000420455 PHLDA3Q9Y5J5 127 aa9.78□□□□□ -0.84
TMEM50B-201ENST00000420455 TRGV11A0A075B6L2 103 aa9.78□□□□□ -0.84
TMEM50B-201ENST00000420455 SPATA45Q537H7 98 aa9.78□□□□□ -0.84
TMEM50B-201ENST00000420455 STHQ8IWL8 128 aa9.78□□□□□ -0.84
TMEM50B-201ENST00000420455 LINC00315P59091 139 aa9.77□□□□□ -0.84
TMEM50B-201ENST00000420455 MDFICQ9P1T7 246 aa9.77□□□□□ -0.84
TMEM50B-201ENST00000420455 WNK1Q9H4A3 2382 aa9.77□□□□□ -0.85
TMEM50B-201ENST00000420455 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
TMEM50B-201ENST00000420455 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.85
TMEM50B-201ENST00000420455 MRAP2Q96G30 205 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 MAP1LC3AQ9H492 121 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 HSPB8Q9UJY1 196 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 INSP01308 110 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 SMIM15Q7Z3B0 74 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 MIEN1Q9BRT3 115 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 VWFP04275 2813 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 LINC01545Q5VT33 79 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 C14orf178Q8N769 122 aaPredicted RBP9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 DPH3P1Q9H4G8 78 aa9.76□□□□□ -0.85
TMEM50B-201ENST00000420455 IGLL1P15814 213 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 IL17DQ8TAD2 202 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 RASL10AQ92737 203 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 MAP1LC3CQ9BXW4 147 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 TRAV9-2A0A087WT02 112 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 IGLC3P0DOY3 106 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 PET117Q6UWS5 81 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 C1orf158Q8N1D5 194 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 JPT2Q9H910 190 aa9.75□□□□□ -0.85
TMEM50B-201ENST00000420455 EREGO14944 169 aa9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 HBDP02042 147 aa9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 AP1S3Q96PC3 154 aa9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 PMCHL2Q9BQD1 86 aa9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 TEP1Q99973 2627 aaKnown RBP9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 NUTF2P61970 127 aaKnown RBP9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 MORN3Q6PF18 240 aaPredicted RBP9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 Q8N8P6 123 aa9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 CSNK1G2-AS1Q8NCQ2 148 aa9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 NXT2Q9NPJ8 142 aaKnown RBP9.74□□□□□ -0.85
TMEM50B-201ENST00000420455 RPL39LQ96EH5 51 aaKnown RBP9.73□□□□□ -0.85
TMEM50B-201ENST00000420455 H0Y8G0 127 aa9.73□□□□□ -0.85
TMEM50B-201ENST00000420455 SNHG12Q9BXW3 62 aa9.73□□□□□ -0.85
TMEM50B-201ENST00000420455 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
TMEM50B-201ENST00000420455 hDV102S1A0JD36 115 aa9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 CBY3A6NI87 242 aa9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 ZNF705AQ6ZN79 300 aaPredicted RBP9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 WFDC10AQ9H1F0 79 aa9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 EDA2RQ9HAV5 297 aa9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 JMJD1CQ15652 2540 aa9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 FBN1P35555 2871 aaKnown RBP9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 DNAH3Q8TD57 4116 aa9.72□□□□□ -0.85
TMEM50B-201ENST00000420455 UFSP1Q6NVU6 142 aa9.71□□□□□ -0.85
TMEM50B-201ENST00000420455 CRYGDP07320 174 aa9.71□□□□□ -0.85
TMEM50B-201ENST00000420455 FCER1GP30273 86 aa9.71□□□□□ -0.85
TMEM50B-201ENST00000420455 ANK2Q01484 3957 aa9.71□□□□□ -0.86
TMEM50B-201ENST00000420455 TRRAPQ9Y4A5 3859 aa9.71□□□□□ -0.86
TMEM50B-201ENST00000420455 TCAPO15273 167 aa9.71□□□□□ -0.86
TMEM50B-201ENST00000420455 XCL2Q9UBD3 114 aa9.71□□□□□ -0.86
TMEM50B-201ENST00000420455 PRM2P04554 102 aa9.7□□□□□ -0.86
TMEM50B-201ENST00000420455 ZNF415Q09FC8 603 aa9.7□□□□□ -0.86
TMEM50B-201ENST00000420455 TMEM158Q8WZ71 300 aa9.7□□□□□ -0.86
TMEM50B-201ENST00000420455 LINC01587Q99440 93 aa9.7□□□□□ -0.86
TMEM50B-201ENST00000420455 SPXQ9BT56 116 aa9.7□□□□□ -0.86
TMEM50B-201ENST00000420455 RPL32P62910 135 aaKnown RBP9.7□□□□□ -0.86
TMEM50B-201ENST00000420455 C20orf78Q9BR46 151 aa9.7□□□□□ -0.86
TMEM50B-201ENST00000420455 SMIM2Q9BVW6 85 aa9.7□□□□□ -0.86
TMEM50B-201ENST00000420455 M0R2P5 195 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 RNASE8Q8TDE3 154 aaKnown RBP9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 A0A087WWL8 130 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 C20orf202A1L168 122 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 MGPP08493 103 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 C1QTNF4Q9BXJ3 329 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 SUMO2P61956 95 aaKnown RBP9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 SHISA2Q6UWI4 295 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 GTSCR1Q86UQ5 136 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 UQCR10Q9UDW1 63 aa9.69□□□□□ -0.86
TMEM50B-201ENST00000420455 PPP1R17O96001 155 aa9.68□□□□□ -0.86
TMEM50B-201ENST00000420455 LGALS9BQ3B8N2 356 aa9.68□□□□□ -0.86
TMEM50B-201ENST00000420455 ZNF876PQ49A33 203 aa9.68□□□□□ -0.86
TMEM50B-201ENST00000420455 LGALS9CQ6DKI2 356 aa9.68□□□□□ -0.86
TMEM50B-201ENST00000420455 SUMO4Q6EEV6 95 aa9.68□□□□□ -0.86
TMEM50B-201ENST00000420455 C2orf88Q9BSF0 95 aa9.68□□□□□ -0.86
TMEM50B-201ENST00000420455 AZU1P20160 251 aa9.67□□□□□ -0.86
TMEM50B-201ENST00000420455 LAGE3Q14657 143 aa9.67□□□□□ -0.86
TMEM50B-201ENST00000420455 ST20Q9HBF5 79 aa9.67□□□□□ -0.86
TMEM50B-201ENST00000420455 TRBV6-5A0A0K0K1A5 114 aa9.67□□□□□ -0.86
TMEM50B-201ENST00000420455 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
TMEM50B-201ENST00000420455 K7EMI3 77 aa9.67□□□□□ -0.86
TMEM50B-201ENST00000420455 TMEM263Q8WUH6 116 aaKnown RBP9.67□□□□□ -0.86
TMEM50B-201ENST00000420455 SMIM17P0DL12 118 aa9.66□□□□□ -0.86
TMEM50B-201ENST00000420455 DKK2Q9UBU2 259 aa9.66□□□□□ -0.86
TMEM50B-201ENST00000420455 ATRQ13535 2644 aa9.66□□□□□ -0.86
TMEM50B-201ENST00000420455 A8MWV9 139 aa9.66□□□□□ -0.86
TMEM50B-201ENST00000420455 GOLT1BQ9Y3E0 138 aa9.66□□□□□ -0.86
TMEM50B-201ENST00000420455 M0QY20 66 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms