RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 EVI2AP22794 236 aa13.78□□□□□ -0.2
GTF3A-202ENST00000419181 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
GTF3A-202ENST00000419181 C14orf178Q8N769 122 aaPredicted RBP13.78□□□□□ -0.2
GTF3A-202ENST00000419181 OR10AG1Q8NH19 301 aa13.78□□□□□ -0.2
GTF3A-202ENST00000419181 SMIM12Q96EX1 92 aa13.78□□□□□ -0.2
GTF3A-202ENST00000419181 SSBP4Q9BWG4 385 aaPredicted RBP13.78□□□□□ -0.2
GTF3A-202ENST00000419181 GTSF1LQ9H1H1 148 aa13.78□□□□□ -0.2
GTF3A-202ENST00000419181 Q9UF83 564 aa13.78□□□□□ -0.2
GTF3A-202ENST00000419181 TRBV20OR9-2A0A075B6H5 130 aa13.77□□□□□ -0.21
GTF3A-202ENST00000419181 RAB19A4D1S5 217 aa13.77□□□□□ -0.21
GTF3A-202ENST00000419181 OR5AL1P0C617 328 aa13.77□□□□□ -0.21
GTF3A-202ENST00000419181 GNG4P50150 75 aa13.77□□□□□ -0.21
GTF3A-202ENST00000419181 LELP1Q5T871 98 aa13.77□□□□□ -0.21
GTF3A-202ENST00000419181 MED9Q9NWA0 146 aa13.77□□□□□ -0.21
GTF3A-202ENST00000419181 IGHV3-38A0A0C4DH36 116 aa13.76□□□□□ -0.21
GTF3A-202ENST00000419181 GAGE12JA6NER3 117 aa13.76□□□□□ -0.21
GTF3A-202ENST00000419181 NKX2-5P52952 324 aaPredicted RBP13.76□□□□□ -0.21
GTF3A-202ENST00000419181 GAGE1Q13065 139 aa13.76□□□□□ -0.21
GTF3A-202ENST00000419181 GAGE4Q13068 117 aa13.76□□□□□ -0.21
GTF3A-202ENST00000419181 GAGE5Q13069 117 aa13.76□□□□□ -0.21
GTF3A-202ENST00000419181 GAGE13Q4V321 117 aa13.76□□□□□ -0.21
GTF3A-202ENST00000419181 TNFRSF18Q9Y5U5 241 aa13.76□□□□□ -0.21
GTF3A-202ENST00000419181 TRAV8-6A0A0B4J262 113 aa13.75□□□□□ -0.21
GTF3A-202ENST00000419181 C19orf71A6NCJ1 209 aa13.75□□□□□ -0.21
GTF3A-202ENST00000419181 BLOC1S1P78537 153 aa13.75□□□□□ -0.21
GTF3A-202ENST00000419181 LINC01556Q5JQF7 62 aa13.75□□□□□ -0.21
GTF3A-202ENST00000419181 OR10J3Q5JRS4 329 aa13.75□□□□□ -0.21
GTF3A-202ENST00000419181 NFE4Q86UQ8 179 aa13.74□□□□□ -0.21
GTF3A-202ENST00000419181 C10orf126Q8N4M7 172 aa13.74□□□□□ -0.21
GTF3A-202ENST00000419181 LYPD6BQ8NI32 183 aa13.74□□□□□ -0.21
GTF3A-202ENST00000419181 MSRB1Q9NZV6 116 aa13.74□□□□□ -0.21
GTF3A-202ENST00000419181 BOLA1Q9Y3E2 137 aa13.74□□□□□ -0.21
GTF3A-202ENST00000419181 DAZAP1Q96EP5 407 aaKnown RBP13.73□□□□□ -0.21
GTF3A-202ENST00000419181 MUC21A0A0G2JKD1 596 aa13.72□□□□□ -0.21
GTF3A-202ENST00000419181 MUC21A0A140T8X8 626 aa13.72□□□□□ -0.21
GTF3A-202ENST00000419181 SPANXN1Q5VSR9 72 aa13.72□□□□□ -0.21
GTF3A-202ENST00000419181 TRBV10-1A0A0K0K1A3 114 aa13.71□□□□□ -0.21
GTF3A-202ENST00000419181 C16orf90A8MZG2 172 aa13.71□□□□□ -0.21
GTF3A-202ENST00000419181 RPS20P60866 119 aaKnown RBP13.71□□□□□ -0.21
GTF3A-202ENST00000419181 SPATA12Q7Z6I5 190 aa13.71□□□□□ -0.21
GTF3A-202ENST00000419181 OR2D3Q8NGH3 330 aa13.71□□□□□ -0.21
GTF3A-202ENST00000419181 IGLC6P0CF74 106 aa13.7□□□□□ -0.22
GTF3A-202ENST00000419181 GZMBP10144 247 aa13.7□□□□□ -0.22
GTF3A-202ENST00000419181 BIN3Q9NQY0 253 aa13.7□□□□□ -0.22
GTF3A-202ENST00000419181 RBFOX3A6NFN3 312 aa13.69□□□□□ -0.22
GTF3A-202ENST00000419181 P01737 135 aa13.69□□□□□ -0.22
GTF3A-202ENST00000419181 RAB4BP61018 213 aa13.69□□□□□ -0.22
GTF3A-202ENST00000419181 FER1L6-AS1Q8NA97 138 aa13.69□□□□□ -0.22
GTF3A-202ENST00000419181 A0A087WWC5 75 aa13.68□□□□□ -0.22
GTF3A-202ENST00000419181 TMEM250H0YL14 139 aa13.68□□□□□ -0.22
GTF3A-202ENST00000419181 KRTAP10-2P60368 255 aa13.68□□□□□ -0.22
GTF3A-202ENST00000419181 ZNF56Q15929 161 aa13.68□□□□□ -0.22
GTF3A-202ENST00000419181 XKRY2A2RUG3 117 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 IBA57-AS1B1ANH7 110 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 IGHV3-30P01768 117 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 IGHV3-33P01772 117 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 IGHV3-30-3P0DP02 117 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 IGHV3-30-5P0DP03 117 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 ERVFC1-1P60608 527 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 SSTP61278 116 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 RPL36AP83881 106 aaKnown RBP13.67□□□□□ -0.22
GTF3A-202ENST00000419181 OR10G8Q8NGN5 311 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 RPL36ALQ969Q0 106 aaKnown RBP13.67□□□□□ -0.22
GTF3A-202ENST00000419181 AP1S3Q96PC3 154 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 TPPP3Q9BW30 176 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 KIF25-AS1Q9Y6Z4 181 aa13.67□□□□□ -0.22
GTF3A-202ENST00000419181 TRBV7-3A0A075B6L6 115 aa13.66□□□□□ -0.22
GTF3A-202ENST00000419181 K7EN84 100 aa13.66□□□□□ -0.22
GTF3A-202ENST00000419181 UBE2D3P61077 147 aa13.66□□□□□ -0.22
GTF3A-202ENST00000419181 UBE2D2P62837 147 aa13.66□□□□□ -0.22
GTF3A-202ENST00000419181 NUDT10Q8NFP7 164 aa13.66□□□□□ -0.22
GTF3A-202ENST00000419181 NUDT11Q96G61 164 aa13.66□□□□□ -0.22
GTF3A-202ENST00000419181 LRP1BQ9NZR2 4599 aa13.65□□□□□ -0.22
GTF3A-202ENST00000419181 Q8N3U1 123 aa13.65□□□□□ -0.22
GTF3A-202ENST00000419181 OCC1Q8TAD7 63 aa13.65□□□□□ -0.22
GTF3A-202ENST00000419181 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
GTF3A-202ENST00000419181 CACNG7P62955 275 aa13.64□□□□□ -0.23
GTF3A-202ENST00000419181 TOR2AQ5JU69 321 aa13.64□□□□□ -0.23
GTF3A-202ENST00000419181 NEXN-AS1Q8NBZ9 246 aa13.64□□□□□ -0.23
GTF3A-202ENST00000419181 A0A087WTM6 91 aa13.63□□□□□ -0.23
GTF3A-202ENST00000419181 F2Z2F3 143 aa13.63□□□□□ -0.23
GTF3A-202ENST00000419181 F5H697 171 aa13.63□□□□□ -0.23
GTF3A-202ENST00000419181 SMIM17P0DL12 118 aa13.63□□□□□ -0.23
GTF3A-202ENST00000419181 LAGE3Q14657 143 aa13.63□□□□□ -0.23
GTF3A-202ENST00000419181 RNASE7Q9H1E1 156 aaKnown RBP13.63□□□□□ -0.23
GTF3A-202ENST00000419181 EREGO14944 169 aa13.62□□□□□ -0.23
GTF3A-202ENST00000419181 LYZL1Q6UWQ5 148 aa13.62□□□□□ -0.23
GTF3A-202ENST00000419181 FAM210AQ96ND0 272 aa13.62□□□□□ -0.23
GTF3A-202ENST00000419181 RPP21Q9H633 154 aaKnown RBP13.62□□□□□ -0.23
GTF3A-202ENST00000419181 RYR1P21817 5038 aa13.62□□□□□ -0.23
GTF3A-202ENST00000419181 DNAH5Q8TE73 4624 aa13.61□□□□□ -0.23
GTF3A-202ENST00000419181 NDUFS6O75380 124 aaKnown RBP13.61□□□□□ -0.23
GTF3A-202ENST00000419181 CTRLP40313 264 aa13.61□□□□□ -0.23
GTF3A-202ENST00000419181 NIT1Q86X76 327 aa13.61□□□□□ -0.23
GTF3A-202ENST00000419181 EIF5A2Q9GZV4 153 aaKnown RBP13.61□□□□□ -0.23
GTF3A-202ENST00000419181 Q9HAA7 133 aa13.61□□□□□ -0.23
GTF3A-202ENST00000419181 CDK2AP2O75956 126 aa13.59□□□□□ -0.23
GTF3A-202ENST00000419181 CEBPGP53567 150 aa13.59□□□□□ -0.23
GTF3A-202ENST00000419181 WDR73Q6P4I2 378 aa13.59□□□□□ -0.23
GTF3A-202ENST00000419181 DAZ4Q86SG3 579 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms