RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 OR10AG1Q8NH19 301 aa13.94□□□□□ -0.18
PKNOX1-202ENST00000418336 PHLDA3Q9Y5J5 127 aa13.94□□□□□ -0.18
PKNOX1-202ENST00000418336 LY96Q9Y6Y9 160 aa13.94□□□□□ -0.18
PKNOX1-202ENST00000418336 A0A087WWL8 130 aa13.93□□□□□ -0.18
PKNOX1-202ENST00000418336 SYT8Q8NBV8 401 aa13.93□□□□□ -0.18
PKNOX1-202ENST00000418336 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
PKNOX1-202ENST00000418336 TEX46H3BTG2 121 aa13.92□□□□□ -0.18
PKNOX1-202ENST00000418336 M0R381 172 aa13.92□□□□□ -0.18
PKNOX1-202ENST00000418336 PDE6DO43924 150 aa13.92□□□□□ -0.18
PKNOX1-202ENST00000418336 PRR27Q6MZM9 219 aa13.92□□□□□ -0.18
PKNOX1-202ENST00000418336 ZFP82Q8N141 532 aa13.92□□□□□ -0.18
PKNOX1-202ENST00000418336 VAX2Q9UIW0 290 aa13.92□□□□□ -0.18
PKNOX1-202ENST00000418336 RHODO00212 210 aa13.91□□□□□ -0.18
PKNOX1-202ENST00000418336 OR5AL1P0C617 328 aa13.91□□□□□ -0.18
PKNOX1-202ENST00000418336 LINC01556Q5JQF7 62 aa13.91□□□□□ -0.18
PKNOX1-202ENST00000418336 LELP1Q5T871 98 aa13.91□□□□□ -0.18
PKNOX1-202ENST00000418336 ATP6V0E2Q8NHE4 81 aa13.91□□□□□ -0.18
PKNOX1-202ENST00000418336 SMIM12Q96EX1 92 aa13.91□□□□□ -0.18
PKNOX1-202ENST00000418336 GTSF1LQ9H1H1 148 aa13.91□□□□□ -0.18
PKNOX1-202ENST00000418336 GAGE12JA6NER3 117 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 K7EP13 123 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 IFNA1P01562 189 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 IGLC6P0CF74 106 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 KRTAP10-2P60368 255 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 GAGE1Q13065 139 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 GAGE4Q13068 117 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 GAGE5Q13069 117 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 GAGE13Q4V321 117 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 KIF25-AS1Q9Y6Z4 181 aa13.9□□□□□ -0.18
PKNOX1-202ENST00000418336 IGHV3-38A0A0C4DH36 116 aa13.89□□□□□ -0.19
PKNOX1-202ENST00000418336 FAM74A4Q5TZK3 123 aa13.89□□□□□ -0.19
PKNOX1-202ENST00000418336 MED9Q9NWA0 146 aa13.89□□□□□ -0.19
PKNOX1-202ENST00000418336 MUC21A0A0G2JKD1 596 aa13.88□□□□□ -0.19
PKNOX1-202ENST00000418336 MUC21A0A140T8X8 626 aa13.88□□□□□ -0.19
PKNOX1-202ENST00000418336 KRTAP17-1Q9BYP8 105 aa13.88□□□□□ -0.19
PKNOX1-202ENST00000418336 GZMBP10144 247 aa13.87□□□□□ -0.19
PKNOX1-202ENST00000418336 TAGLN2P37802 199 aaKnown RBP13.87□□□□□ -0.19
PKNOX1-202ENST00000418336 GNG4P50150 75 aa13.87□□□□□ -0.19
PKNOX1-202ENST00000418336 Q8N3U1 123 aa13.87□□□□□ -0.19
PKNOX1-202ENST00000418336 MSRB1Q9NZV6 116 aa13.87□□□□□ -0.19
PKNOX1-202ENST00000418336 K7EN84 100 aa13.86□□□□□ -0.19
PKNOX1-202ENST00000418336 SPATA12Q7Z6I5 190 aa13.86□□□□□ -0.19
PKNOX1-202ENST00000418336 TRAV9-2A0A087WT02 112 aa13.85□□□□□ -0.19
PKNOX1-202ENST00000418336 EVI2AP22794 236 aa13.85□□□□□ -0.19
PKNOX1-202ENST00000418336 BLOC1S1P78537 153 aa13.85□□□□□ -0.19
PKNOX1-202ENST00000418336 IBA57-AS1B1ANH7 110 aa13.84□□□□□ -0.19
PKNOX1-202ENST00000418336 OR10G8Q8NGN5 311 aa13.84□□□□□ -0.19
PKNOX1-202ENST00000418336 TRAV8-6A0A0B4J262 113 aa13.83□□□□□ -0.2
PKNOX1-202ENST00000418336 TRBV10-1A0A0K0K1A3 114 aa13.83□□□□□ -0.2
PKNOX1-202ENST00000418336 RBFOX3A6NFN3 312 aa13.83□□□□□ -0.2
PKNOX1-202ENST00000418336 UBE2D3P61077 147 aa13.83□□□□□ -0.2
PKNOX1-202ENST00000418336 UBE2D2P62837 147 aa13.83□□□□□ -0.2
PKNOX1-202ENST00000418336 OR10J3Q5JRS4 329 aa13.83□□□□□ -0.2
PKNOX1-202ENST00000418336 NFE4Q86UQ8 179 aa13.83□□□□□ -0.2
PKNOX1-202ENST00000418336 OR2D3Q8NGH3 330 aa13.83□□□□□ -0.2
PKNOX1-202ENST00000418336 C16orf90A8MZG2 172 aa13.82□□□□□ -0.2
PKNOX1-202ENST00000418336 RAB4BP61018 213 aa13.82□□□□□ -0.2
PKNOX1-202ENST00000418336 C10orf126Q8N4M7 172 aa13.82□□□□□ -0.2
PKNOX1-202ENST00000418336 NUDT10Q8NFP7 164 aa13.82□□□□□ -0.2
PKNOX1-202ENST00000418336 OCC1Q8TAD7 63 aa13.82□□□□□ -0.2
PKNOX1-202ENST00000418336 NUDT11Q96G61 164 aa13.82□□□□□ -0.2
PKNOX1-202ENST00000418336 DNAH8Q96JB1 4490 aa13.82□□□□□ -0.2
PKNOX1-202ENST00000418336 TMEM250H0YL14 139 aa13.81□□□□□ -0.2
PKNOX1-202ENST00000418336 SPANXN1Q5VSR9 72 aa13.81□□□□□ -0.2
PKNOX1-202ENST00000418336 A0A087WTM6 91 aa13.8□□□□□ -0.2
PKNOX1-202ENST00000418336 IGHV3-30P01768 117 aa13.8□□□□□ -0.2
PKNOX1-202ENST00000418336 IGHV3-33P01772 117 aa13.8□□□□□ -0.2
PKNOX1-202ENST00000418336 IGHV3-30-3P0DP02 117 aa13.8□□□□□ -0.2
PKNOX1-202ENST00000418336 IGHV3-30-5P0DP03 117 aa13.8□□□□□ -0.2
PKNOX1-202ENST00000418336 RPS20P60866 119 aaKnown RBP13.8□□□□□ -0.2
PKNOX1-202ENST00000418336 FER1L6-AS1Q8NA97 138 aa13.8□□□□□ -0.2
PKNOX1-202ENST00000418336 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
PKNOX1-202ENST00000418336 TRBV7-3A0A075B6L6 115 aa13.79□□□□□ -0.2
PKNOX1-202ENST00000418336 LRCOL1A6NCL2 159 aa13.79□□□□□ -0.2
PKNOX1-202ENST00000418336 P01737 135 aa13.79□□□□□ -0.2
PKNOX1-202ENST00000418336 NDUFS6O75380 124 aaKnown RBP13.78□□□□□ -0.2
PKNOX1-202ENST00000418336 FUSP35637 526 aaKnown RBP eCLIP13.78□□□□□ -0.29e-8■□□□□ 9.5
PKNOX1-202ENST00000418336 DAZAP1Q96EP5 407 aaKnown RBP13.78□□□□□ -0.2
PKNOX1-202ENST00000418336 CNFNQ9BYD5 112 aa13.78□□□□□ -0.2
PKNOX1-202ENST00000418336 RNASE7Q9H1E1 156 aaKnown RBP13.78□□□□□ -0.2
PKNOX1-202ENST00000418336 A0A087WWC5 75 aa13.77□□□□□ -0.21
PKNOX1-202ENST00000418336 CTRLP40313 264 aa13.77□□□□□ -0.21
PKNOX1-202ENST00000418336 SSTP61278 116 aa13.77□□□□□ -0.21
PKNOX1-202ENST00000418336 ZNF56Q15929 161 aa13.77□□□□□ -0.21
PKNOX1-202ENST00000418336 LYZL1Q6UWQ5 148 aa13.77□□□□□ -0.21
PKNOX1-202ENST00000418336 FAM210AQ96ND0 272 aa13.77□□□□□ -0.21
PKNOX1-202ENST00000418336 CDK2AP2O75956 126 aa13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 ERVFC1-1P60608 527 aa13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 RPL36AP83881 106 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 LAGE3Q14657 143 aa13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 TOR2AQ5JU69 321 aa13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 NIT1Q86X76 327 aa13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 RPL36ALQ969Q0 106 aaKnown RBP13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 AP1S3Q96PC3 154 aa13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 BIN3Q9NQY0 253 aa13.76□□□□□ -0.21
PKNOX1-202ENST00000418336 DAZ4Q86SG3 579 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-202ENST00000418336 TPPP3Q9BW30 176 aa13.75□□□□□ -0.21
PKNOX1-202ENST00000418336 DAZ3Q9NR90 486 aaKnown RBP13.75□□□□□ -0.21
PKNOX1-202ENST00000418336 F2Z2F3 143 aa13.74□□□□□ -0.21
PKNOX1-202ENST00000418336 M0QY20 66 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms