RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SVIPQ8NHG7 77 aa12.29□□□□□ -0.44
CALD1-204ENST00000417172 AP1S3Q96PC3 154 aa12.29□□□□□ -0.44
CALD1-204ENST00000417172 LINC00467Q9BRT7 94 aa12.29□□□□□ -0.44
CALD1-204ENST00000417172 SAMD10Q9BYL1 202 aa12.29□□□□□ -0.44
CALD1-204ENST00000417172 ZNF415Q09FC8 603 aa12.29□□□□□ -0.44
CALD1-204ENST00000417172 HIST1H2BLQ99880 126 aa12.29□□□□□ -0.44
CALD1-204ENST00000417172 CSTL1Q9H114 145 aa12.29□□□□□ -0.44
CALD1-204ENST00000417172 KIF25-AS1Q9Y6Z4 181 aa12.29□□□□□ -0.44
CALD1-204ENST00000417172 G3V4G9 280 aa12.28□□□□□ -0.44
CALD1-204ENST00000417172 DPH3P1Q9H4G8 78 aa12.28□□□□□ -0.44
CALD1-204ENST00000417172 LOC389332A0A1B0GUA5 103 aa12.27□□□□□ -0.44
CALD1-204ENST00000417172 S100A2P29034 98 aa12.27□□□□□ -0.44
CALD1-204ENST00000417172 COTL1Q14019 142 aa12.27□□□□□ -0.44
CALD1-204ENST00000417172 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.44
CALD1-204ENST00000417172 RNASEKQ6P5S7 137 aaKnown RBP12.27□□□□□ -0.44
CALD1-204ENST00000417172 RNASE8Q8TDE3 154 aaKnown RBP12.27□□□□□ -0.44
CALD1-204ENST00000417172 C1QTNF4Q9BXJ3 329 aa12.27□□□□□ -0.44
CALD1-204ENST00000417172 GOLT1BQ9Y3E0 138 aa12.27□□□□□ -0.44
CALD1-204ENST00000417172 TCAPO15273 167 aa12.27□□□□□ -0.45
CALD1-204ENST00000417172 LINC00315P59091 139 aa12.27□□□□□ -0.45
CALD1-204ENST00000417172 SYT8Q8NBV8 401 aa12.27□□□□□ -0.45
CALD1-204ENST00000417172 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.45
CALD1-204ENST00000417172 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
CALD1-204ENST00000417172 NIT1Q86X76 327 aa12.26□□□□□ -0.45
CALD1-204ENST00000417172 DNAH3Q8TD57 4116 aa12.25□□□□□ -0.45
CALD1-204ENST00000417172 IGHV4-30-4P0DP06 118 aa12.25□□□□□ -0.45
CALD1-204ENST00000417172 PKIAP61925 76 aa12.25□□□□□ -0.45
CALD1-204ENST00000417172 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
CALD1-204ENST00000417172 FAM19A2Q8N3H0 131 aa12.25□□□□□ -0.45
CALD1-204ENST00000417172 TSTD3H0UI37 97 aa12.25□□□□□ -0.45
CALD1-204ENST00000417172 M0R2P5 195 aa12.25□□□□□ -0.45
CALD1-204ENST00000417172 NOTCH1P46531 2555 aa12.25□□□□□ -0.45
CALD1-204ENST00000417172 TNFRSF6BO95407 300 aa12.24□□□□□ -0.45
CALD1-204ENST00000417172 CRYGDP07320 174 aa12.24□□□□□ -0.45
CALD1-204ENST00000417172 PMCHP20382 165 aa12.24□□□□□ -0.45
CALD1-204ENST00000417172 IFI27P40305 119 aaPredicted RBP12.24□□□□□ -0.45
CALD1-204ENST00000417172 EGFEM1PQ0D2K5 195 aa12.24□□□□□ -0.45
CALD1-204ENST00000417172 NRACQ8N912 160 aa12.24□□□□□ -0.45
CALD1-204ENST00000417172 OR10D4PQ8NGN7 298 aa12.24□□□□□ -0.45
CALD1-204ENST00000417172 IL17DQ8TAD2 202 aa12.24□□□□□ -0.45
CALD1-204ENST00000417172 RPL39LQ96EH5 51 aaKnown RBP12.24□□□□□ -0.45
CALD1-204ENST00000417172 IGHV3-73A0A0B4J1V6 119 aa12.23□□□□□ -0.45
CALD1-204ENST00000417172 PLAC8L1A1L4L8 177 aa12.23□□□□□ -0.45
CALD1-204ENST00000417172 SMIM17P0DL12 118 aa12.23□□□□□ -0.45
CALD1-204ENST00000417172 ESDP10768 282 aa12.23□□□□□ -0.45
CALD1-204ENST00000417172 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
CALD1-204ENST00000417172 PPBPP02775 128 aa12.23□□□□□ -0.45
CALD1-204ENST00000417172 DEFB135Q30KP9 77 aa12.23□□□□□ -0.45
CALD1-204ENST00000417172 RASL10AQ92737 203 aa12.23□□□□□ -0.45
CALD1-204ENST00000417172 PACRGQ96M98 296 aaPredicted RBP12.23□□□□□ -0.45
CALD1-204ENST00000417172 DDTP30046 118 aa12.22□□□□□ -0.45
CALD1-204ENST00000417172 F5H697 171 aa12.21□□□□□ -0.45
CALD1-204ENST00000417172 ZNF56Q15929 161 aa12.21□□□□□ -0.45
CALD1-204ENST00000417172 SUMO4Q6EEV6 95 aa12.21□□□□□ -0.45
CALD1-204ENST00000417172 MRAP2Q96G30 205 aa12.21□□□□□ -0.45
CALD1-204ENST00000417172 NOP10Q9NPE3 64 aaKnown RBP12.21□□□□□ -0.45
CALD1-204ENST00000417172 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.46
CALD1-204ENST00000417172 LINC00614P0C842 121 aa12.21□□□□□ -0.46
CALD1-204ENST00000417172 AMTP48728 403 aa12.21□□□□□ -0.46
CALD1-204ENST00000417172 RRN3P1Q2M238 152 aa12.21□□□□□ -0.46
CALD1-204ENST00000417172 Q6ZTI0 123 aa12.21□□□□□ -0.46
CALD1-204ENST00000417172 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.46
CALD1-204ENST00000417172 TMEM18Q96B42 140 aa12.21□□□□□ -0.46
CALD1-204ENST00000417172 HSBP1O75506 76 aa12.2□□□□□ -0.46
CALD1-204ENST00000417172 POM121L12Q8N7R1 296 aa12.2□□□□□ -0.46
CALD1-204ENST00000417172 SPXQ9BT56 116 aa12.2□□□□□ -0.46
CALD1-204ENST00000417172 NBEAL1Q6ZS30 2694 aa12.2□□□□□ -0.46
CALD1-204ENST00000417172 EMP1P54849 157 aa12.19□□□□□ -0.46
CALD1-204ENST00000417172 C21orf62-AS1Q17RA5 79 aa12.19□□□□□ -0.46
CALD1-204ENST00000417172 C16orf74Q96GX8 76 aa12.19□□□□□ -0.46
CALD1-204ENST00000417172 MAP1LC3AQ9H492 121 aa12.19□□□□□ -0.46
CALD1-204ENST00000417172 X6R8D5 127 aa12.19□□□□□ -0.46
CALD1-204ENST00000417172 APOC4P55056 127 aa12.19□□□□□ -0.46
CALD1-204ENST00000417172 SAMD5Q5TGI4 173 aa12.19□□□□□ -0.46
CALD1-204ENST00000417172 CFAP126Q5VTH2 177 aa12.19□□□□□ -0.46
CALD1-204ENST00000417172 IGHV1-24A0A0C4DH33 117 aa12.18□□□□□ -0.46
CALD1-204ENST00000417172 KIR2DL5BA0A0G2JN68 375 aa12.18□□□□□ -0.46
CALD1-204ENST00000417172 KIR2DL5BA0A0G2JPC4 375 aa12.18□□□□□ -0.46
CALD1-204ENST00000417172 PRB2P02812 416 aaPredicted RBP12.18□□□□□ -0.46
CALD1-204ENST00000417172 UFSP1Q6NVU6 142 aa12.18□□□□□ -0.46
CALD1-204ENST00000417172 FA2HQ7L5A8 372 aa12.18□□□□□ -0.46
CALD1-204ENST00000417172 KIR2DL5AQ8N109 375 aa12.18□□□□□ -0.46
CALD1-204ENST00000417172 KIR2DL5BQ8NHK3 375 aa12.18□□□□□ -0.46
CALD1-204ENST00000417172 Q6ZSN1 163 aa12.17□□□□□ -0.46
CALD1-204ENST00000417172 Q6ZWC4 215 aa12.17□□□□□ -0.46
CALD1-204ENST00000417172 CHCHD1Q96BP2 118 aaKnown RBP12.17□□□□□ -0.46
CALD1-204ENST00000417172 LAMTOR2Q9Y2Q5 125 aa12.17□□□□□ -0.46
CALD1-204ENST00000417172 PYY3Q5JQD4 70 aa12.17□□□□□ -0.46
CALD1-204ENST00000417172 DEFB104AQ8WTQ1 72 aa12.17□□□□□ -0.46
CALD1-204ENST00000417172 PTH2Q96A98 100 aa12.17□□□□□ -0.46
CALD1-204ENST00000417172 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
CALD1-204ENST00000417172 IGLV2-18A0A075B6J9 118 aa12.16□□□□□ -0.46
CALD1-204ENST00000417172 A8MWV9 139 aa12.16□□□□□ -0.46
CALD1-204ENST00000417172 P0DMU3 169 aa12.16□□□□□ -0.46
CALD1-204ENST00000417172 FAM231AP0DMU4 169 aa12.16□□□□□ -0.46
CALD1-204ENST00000417172 FAM231CP0DMU5 169 aa12.16□□□□□ -0.46
CALD1-204ENST00000417172 GAGE1Q13065 139 aa12.16□□□□□ -0.46
CALD1-204ENST00000417172 NEGR1Q7Z3B1 354 aa12.16□□□□□ -0.46
CALD1-204ENST00000417172 Q9UF83 564 aa12.16□□□□□ -0.46
CALD1-204ENST00000417172 M0QY20 66 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms