RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 MAP1LC3B2A6NCE7 125 aa14.43□□□□□ -0.1
ACTB-203ENST00000417101 TOR2AQ5JU69 321 aa14.43□□□□□ -0.1
ACTB-203ENST00000417101 FAM162BQ5T6X4 162 aa14.43□□□□□ -0.1
ACTB-203ENST00000417101 COX8CQ7Z4L0 72 aa14.43□□□□□ -0.1
ACTB-203ENST00000417101 MAP1LC3BQ9GZQ8 125 aa14.43□□□□□ -0.1
ACTB-203ENST00000417101 C1QBP02746 253 aa14.42□□□□□ -0.1
ACTB-203ENST00000417101 UBE2G1P62253 170 aa14.42□□□□□ -0.1
ACTB-203ENST00000417101 FMC1Q96HJ9 113 aa14.42□□□□□ -0.1
ACTB-203ENST00000417101 PHLDA3Q9Y5J5 127 aa14.42□□□□□ -0.1
ACTB-203ENST00000417101 A0A087WWL8 130 aa14.41□□□□□ -0.1
ACTB-203ENST00000417101 TMSB15BA0A087X1C1 80 aa14.41□□□□□ -0.1
ACTB-203ENST00000417101 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.4□□□□□ -0.1
ACTB-203ENST00000417101 G3V3Q6 166 aa14.4□□□□□ -0.1
ACTB-203ENST00000417101 M0R381 172 aa14.4□□□□□ -0.1
ACTB-203ENST00000417101 TPT1P13693 172 aaKnown RBP14.4□□□□□ -0.1
ACTB-203ENST00000417101 SFRP2Q96HF1 295 aa14.4□□□□□ -0.1
ACTB-203ENST00000417101 CYTL1Q9NRR1 136 aa14.4□□□□□ -0.1
ACTB-203ENST00000417101 URGCP-MRPS24S4R325 110 aa14.4□□□□□ -0.1
ACTB-203ENST00000417101 ARPC5O15511 151 aa14.39□□□□□ -0.11
ACTB-203ENST00000417101 ZNF674Q2M3X9 581 aa14.39□□□□□ -0.11
ACTB-203ENST00000417101 CST9LP1Q5W188 147 aa14.39□□□□□ -0.11
ACTB-203ENST00000417101 NIT1Q86X76 327 aa14.39□□□□□ -0.11
ACTB-203ENST00000417101 BAALCQ8WXS3 180 aa14.39□□□□□ -0.11
ACTB-203ENST00000417101 LTAP01374 205 aa14.38□□□□□ -0.11
ACTB-203ENST00000417101 LINC01559Q495D7 138 aa14.38□□□□□ -0.11
ACTB-203ENST00000417101 STOML3Q8TAV4 291 aa14.38□□□□□ -0.11
ACTB-203ENST00000417101 DNAJC30Q96LL9 226 aa14.38□□□□□ -0.11
ACTB-203ENST00000417101 COX11Q9Y6N1 276 aa14.38□□□□□ -0.11
ACTB-203ENST00000417101 TRBV6-1A0A0K0K1D8 114 aa14.37□□□□□ -0.11
ACTB-203ENST00000417101 FHITP49789 147 aa14.37□□□□□ -0.11
ACTB-203ENST00000417101 Q6ZSA8 131 aa14.37□□□□□ -0.11
ACTB-203ENST00000417101 ZFP82Q8N141 532 aa14.37□□□□□ -0.11
ACTB-203ENST00000417101 RMI2Q96E14 147 aa14.37□□□□□ -0.11
ACTB-203ENST00000417101 TCEAL7Q9BRU2 100 aa14.37□□□□□ -0.11
ACTB-203ENST00000417101 KLK12Q9UKR0 248 aa14.37□□□□□ -0.11
ACTB-203ENST00000417101 IGKV2D-24A0A075B6R9 120 aa14.35□□□□□ -0.11
ACTB-203ENST00000417101 SEC11BP0C7V7 166 aa14.35□□□□□ -0.11
ACTB-203ENST00000417101 AKR1C3P42330 323 aa14.35□□□□□ -0.11
ACTB-203ENST00000417101 LINC01620Q4KN68 170 aa14.35□□□□□ -0.11
ACTB-203ENST00000417101 A0A087WX48 190 aa14.34□□□□□ -0.11
ACTB-203ENST00000417101 TRBV10-1A0A0K0K1A3 114 aa14.34□□□□□ -0.11
ACTB-203ENST00000417101 PAGE4O60829 102 aa14.34□□□□□ -0.11
ACTB-203ENST00000417101 RPL36AP83881 106 aaKnown RBP14.34□□□□□ -0.11
ACTB-203ENST00000417101 RPL36ALQ969Q0 106 aaKnown RBP14.34□□□□□ -0.11
ACTB-203ENST00000417101 UBE2WQ96B02 151 aa14.34□□□□□ -0.11
ACTB-203ENST00000417101 RBFOX3A6NFN3 312 aa14.32□□□□□ -0.12
ACTB-203ENST00000417101 SMLR1H3BR10 107 aa14.32□□□□□ -0.12
ACTB-203ENST00000417101 UBE2D3P61077 147 aa14.32□□□□□ -0.12
ACTB-203ENST00000417101 UBE2D2P62837 147 aa14.32□□□□□ -0.12
ACTB-203ENST00000417101 LINC00528Q8N1L1 170 aa14.32□□□□□ -0.12
ACTB-203ENST00000417101 Q8N976 141 aa14.32□□□□□ -0.12
ACTB-203ENST00000417101 TRBV7-3A0A075B6L6 115 aa14.31□□□□□ -0.12
ACTB-203ENST00000417101 PLA2G1BP04054 148 aaKnown RBP14.31□□□□□ -0.12
ACTB-203ENST00000417101 RPL19P84098 196 aaKnown RBP14.31□□□□□ -0.12
ACTB-203ENST00000417101 ELOBQ15370 118 aa14.31□□□□□ -0.12
ACTB-203ENST00000417101 KCNIP4Q6PIL6 250 aa14.31□□□□□ -0.12
ACTB-203ENST00000417101 CHCHD7Q9BUK0 85 aa14.31□□□□□ -0.12
ACTB-203ENST00000417101 A0A1B0GV50 99 aa14.3□□□□□ -0.12
ACTB-203ENST00000417101 SFT2D1Q8WV19 159 aa14.3□□□□□ -0.12
ACTB-203ENST00000417101 TMEM262E9PQX1 116 aa14.29□□□□□ -0.12
ACTB-203ENST00000417101 RGS21Q2M5E4 152 aa14.29□□□□□ -0.12
ACTB-203ENST00000417101 OR10AG1Q8NH19 301 aa14.29□□□□□ -0.12
ACTB-203ENST00000417101 FAM213BQ8TBF2 198 aa14.29□□□□□ -0.12
ACTB-203ENST00000417101 SCO2A0A1W2PP80 73 aa14.28□□□□□ -0.12
ACTB-203ENST00000417101 J3QL48 77 aa14.28□□□□□ -0.12
ACTB-203ENST00000417101 S100A9P06702 114 aaKnown RBP14.28□□□□□ -0.12
ACTB-203ENST00000417101 RAB4BP61018 213 aa14.28□□□□□ -0.12
ACTB-203ENST00000417101 ZNF56Q15929 161 aa14.28□□□□□ -0.12
ACTB-203ENST00000417101 SCXQ7RTU7 201 aa14.28□□□□□ -0.12
ACTB-203ENST00000417101 KCNRGQ8N5I3 272 aa14.28□□□□□ -0.12
ACTB-203ENST00000417101 OR10G8Q8NGN5 311 aa14.28□□□□□ -0.12
ACTB-203ENST00000417101 MBD3L1Q8WWY6 194 aa14.28□□□□□ -0.12
ACTB-203ENST00000417101 TRBV6-8A0A0A6YYG3 113 aa14.27□□□□□ -0.13
ACTB-203ENST00000417101 ATRAIDQ6UW56 229 aa14.27□□□□□ -0.13
ACTB-203ENST00000417101 BAGE2Q86Y30 109 aa14.27□□□□□ -0.13
ACTB-203ENST00000417101 PFDN1O60925 122 aa14.26□□□□□ -0.13
ACTB-203ENST00000417101 Q0VG73 95 aa14.26□□□□□ -0.13
ACTB-203ENST00000417101 NEXN-AS1Q8NBZ9 246 aa14.26□□□□□ -0.13
ACTB-203ENST00000417101 MLST8Q9BVC4 326 aa14.26□□□□□ -0.13
ACTB-203ENST00000417101 ZNF471Q9BX82 626 aaPredicted RBP14.26□□□□□ -0.13
ACTB-203ENST00000417101 MUC21A0A0G2JKD1 596 aa14.25□□□□□ -0.13
ACTB-203ENST00000417101 MUC21A0A140T8X8 626 aa14.25□□□□□ -0.13
ACTB-203ENST00000417101 UMAD1C9J7I0 102 aa14.25□□□□□ -0.13
ACTB-203ENST00000417101 CXCL1P09341 107 aa14.25□□□□□ -0.13
ACTB-203ENST00000417101 ZNF345Q14585 488 aa14.25□□□□□ -0.13
ACTB-203ENST00000417101 PRR27Q6MZM9 219 aa14.25□□□□□ -0.13
ACTB-203ENST00000417101 C1orf43Q9BWL3 253 aa14.25□□□□□ -0.13
ACTB-203ENST00000417101 SSTP61278 116 aa14.24□□□□□ -0.13
ACTB-203ENST00000417101 SPANXN1Q5VSR9 72 aa14.24□□□□□ -0.13
ACTB-203ENST00000417101 C15orf54Q8N8G6 183 aa14.24□□□□□ -0.13
ACTB-203ENST00000417101 SNAI2O43623 268 aa14.23□□□□□ -0.13
ACTB-203ENST00000417101 MPV17L2Q567V2 206 aa14.23□□□□□ -0.13
ACTB-203ENST00000417101 ENHOQ6UWT2 76 aa14.23□□□□□ -0.13
ACTB-203ENST00000417101 CHAC1Q9BUX1 264 aa14.23□□□□□ -0.13
ACTB-203ENST00000417101 SSBP4Q9BWG4 385 aaPredicted RBP14.23□□□□□ -0.13
ACTB-203ENST00000417101 F5H697 171 aa14.22□□□□□ -0.13
ACTB-203ENST00000417101 CRPP02741 224 aa14.22□□□□□ -0.13
ACTB-203ENST00000417101 DEFB104AQ8WTQ1 72 aa14.22□□□□□ -0.13
ACTB-203ENST00000417101 CHCHD5Q9BSY4 110 aa14.22□□□□□ -0.13
ACTB-203ENST00000417101 ANGP03950 147 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms