RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 URGCP-MRPS24S4R325 110 aa9.83□□□□□ -0.84
CBX3-203ENST00000409747 GRIFINA4D1Z8 144 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 FAM229AH3BQW9 127 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 LTAP01374 205 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 AKR1C3P42330 323 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 ZNF674Q2M3X9 581 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 LINC01559Q495D7 138 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 ZFP82Q8N141 532 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 C14orf178Q8N769 122 aaPredicted RBP9.82□□□□□ -0.84
CBX3-203ENST00000409747 COX11Q9Y6N1 276 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 SFRP2Q96HF1 295 aa9.82□□□□□ -0.84
CBX3-203ENST00000409747 M0R381 172 aa9.81□□□□□ -0.84
CBX3-203ENST00000409747 C1QBP02746 253 aa9.81□□□□□ -0.84
CBX3-203ENST00000409747 S100A9P06702 114 aaKnown RBP9.81□□□□□ -0.84
CBX3-203ENST00000409747 ZNF345Q14585 488 aa9.81□□□□□ -0.84
CBX3-203ENST00000409747 RMI2Q96E14 147 aa9.81□□□□□ -0.84
CBX3-203ENST00000409747 TRBV10-1A0A0K0K1A3 114 aa9.8□□□□□ -0.84
CBX3-203ENST00000409747 UMAD1C9J7I0 102 aa9.8□□□□□ -0.84
CBX3-203ENST00000409747 DAZ4Q86SG3 579 aaKnown RBP9.8□□□□□ -0.84
CBX3-203ENST00000409747 Q8N3U1 123 aa9.8□□□□□ -0.84
CBX3-203ENST00000409747 DAZ3Q9NR90 486 aaKnown RBP9.8□□□□□ -0.84
CBX3-203ENST00000409747 A0A087WWL8 130 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 TMSB15BA0A087X1C1 80 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 KCNIP4Q6PIL6 250 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 Q9UF83 564 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 PAGE4O60829 102 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 PFDN1O60925 122 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 SMR3BP02814 79 aaPredicted RBP9.79□□□□□ -0.84
CBX3-203ENST00000409747 RPL36AP83881 106 aaKnown RBP9.79□□□□□ -0.84
CBX3-203ENST00000409747 KCNRGQ8N5I3 272 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 SFT2D1Q8WV19 159 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 RPL36ALQ969Q0 106 aaKnown RBP9.79□□□□□ -0.84
CBX3-203ENST00000409747 CHCHD7Q9BUK0 85 aa9.79□□□□□ -0.84
CBX3-203ENST00000409747 HERC1Q15751 4861 aa9.78□□□□□ -0.84
CBX3-203ENST00000409747 ELOBQ15370 118 aa9.78□□□□□ -0.84
CBX3-203ENST00000409747 NIT1Q86X76 327 aa9.78□□□□□ -0.84
CBX3-203ENST00000409747 FAM213BQ8TBF2 198 aa9.78□□□□□ -0.84
CBX3-203ENST00000409747 A0A087WX48 190 aa9.77□□□□□ -0.85
CBX3-203ENST00000409747 CXCL1P09341 107 aa9.77□□□□□ -0.85
CBX3-203ENST00000409747 MBD3L1Q8WWY6 194 aa9.77□□□□□ -0.85
CBX3-203ENST00000409747 SRRM2Q9UQ35 2752 aaKnown RBP9.77□□□□□ -0.85
CBX3-203ENST00000409747 TRBV7-3A0A075B6L6 115 aa9.76□□□□□ -0.85
CBX3-203ENST00000409747 HAMPP81172 84 aa9.76□□□□□ -0.85
CBX3-203ENST00000409747 A0A0D9SG52 128 aa9.76□□□□□ -0.85
CBX3-203ENST00000409747 KANTRA0A1W2PQU2 76 aa9.76□□□□□ -0.85
CBX3-203ENST00000409747 HMSDA8MTL9 139 aa9.76□□□□□ -0.85
CBX3-203ENST00000409747 SMLR1H3BR10 107 aa9.76□□□□□ -0.85
CBX3-203ENST00000409747 EIF5AP63241 154 aaKnown RBP9.76□□□□□ -0.85
CBX3-203ENST00000409747 WFDC2Q14508 124 aa9.76□□□□□ -0.85
CBX3-203ENST00000409747 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.76□□□□□ -0.85
CBX3-203ENST00000409747 LECT2O14960 151 aa9.75□□□□□ -0.85
CBX3-203ENST00000409747 RAB4BP61018 213 aa9.75□□□□□ -0.85
CBX3-203ENST00000409747 UBE2D3P61077 147 aa9.75□□□□□ -0.85
CBX3-203ENST00000409747 UBE2D2P62837 147 aa9.75□□□□□ -0.85
CBX3-203ENST00000409747 OR10G8Q8NGN5 311 aa9.75□□□□□ -0.85
CBX3-203ENST00000409747 ZNF471Q9BX82 626 aaPredicted RBP9.75□□□□□ -0.85
CBX3-203ENST00000409747 DNAH8Q96JB1 4490 aa9.75□□□□□ -0.85
CBX3-203ENST00000409747 MYCBP2O75592 4640 aa9.75□□□□□ -0.85
CBX3-203ENST00000409747 IGKV2D-24A0A075B6R9 120 aa9.74□□□□□ -0.85
CBX3-203ENST00000409747 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
CBX3-203ENST00000409747 BCL2L11O43521 198 aa9.74□□□□□ -0.85
CBX3-203ENST00000409747 ZNF56Q15929 161 aa9.74□□□□□ -0.85
CBX3-203ENST00000409747 BAGE2Q86Y30 109 aa9.74□□□□□ -0.85
CBX3-203ENST00000409747 Q8N976 141 aa9.74□□□□□ -0.85
CBX3-203ENST00000409747 KLK12Q9UKR0 248 aa9.74□□□□□ -0.85
CBX3-203ENST00000409747 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
CBX3-203ENST00000409747 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.73□□□□□ -0.85
CBX3-203ENST00000409747 A0A1B0GV50 99 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 H2AFB1P0C5Y9 115 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 Q0VG73 95 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 Q6ZSA8 131 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 BAALCQ8WXS3 180 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 MLST8Q9BVC4 326 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 FAM30AQ9NZY2 134 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 PKIAP61925 76 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 RPL19P84098 196 aaKnown RBP9.73□□□□□ -0.85
CBX3-203ENST00000409747 SPANXN1Q5VSR9 72 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 OR10AG1Q8NH19 301 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 UBE2WQ96B02 151 aa9.73□□□□□ -0.85
CBX3-203ENST00000409747 SNAI2O43623 268 aa9.72□□□□□ -0.85
CBX3-203ENST00000409747 OR5AL1P0C617 328 aa9.72□□□□□ -0.85
CBX3-203ENST00000409747 TRBV6-8A0A0A6YYG3 113 aa9.71□□□□□ -0.85
CBX3-203ENST00000409747 RBFOX3A6NFN3 312 aa9.71□□□□□ -0.85
CBX3-203ENST00000409747 PLA2G1BP04054 148 aaKnown RBP9.71□□□□□ -0.85
CBX3-203ENST00000409747 PRR27Q6MZM9 219 aa9.71□□□□□ -0.85
CBX3-203ENST00000409747 ATRAIDQ6UW56 229 aa9.71□□□□□ -0.85
CBX3-203ENST00000409747 SSBP4Q9BWG4 385 aaPredicted RBP9.71□□□□□ -0.85
CBX3-203ENST00000409747 MANBALQ9NQG1 85 aa9.71□□□□□ -0.85
CBX3-203ENST00000409747 TMEM262E9PQX1 116 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 CRPP02741 224 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 SMIM17P0DL12 118 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 TMEM97Q5BJF2 176 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 TMUB2Q71RG4 321 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 NEXN-AS1Q8NBZ9 246 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 C14orf177Q52M58 125 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 AP1S3Q96PC3 154 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
CBX3-203ENST00000409747 F5H697 171 aa9.69□□□□□ -0.86
CBX3-203ENST00000409747 RPL35P42766 123 aaKnown RBP9.69□□□□□ -0.86
CBX3-203ENST00000409747 TEX46H3BTG2 121 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms