RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 C14orf178Q8N769 122 aaPredicted RBP4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 MSRB2Q9Y3D2 182 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 CXCL5P42830 114 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 LINC00643Q86TS7 51 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 RNF182Q8N6D2 247 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 NPBQ8NG41 125 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 ZNRF2Q8NHG8 242 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 DUX3Q96PT4 197 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 PHLDA3Q9Y5J5 127 aa4.43□□□□□ -1.7
R3HDM1-202ENST00000409478 LOC107984640A0A0U1RRK4 108 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 MBD3L4A6NDZ8 208 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 MBD3L3A6NE82 208 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 MBD3L5A6NJ08 208 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 LST1O00453 97 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 S100A4P26447 101 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 MBD3L2Q8NHZ7 208 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 CCL17Q92583 94 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 PKDREJQ9NTG1 2253 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 A0A0G2JNJ9 132 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 CTSGP08311 255 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 Q9UFV3 132 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 VCYO14598 125 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 BUB3O43684 328 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 IGHV1-69P01742 117 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 COX7CP15954 63 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 ATP1A1-AS1Q5TC04 95 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 GPHB5Q86YW7 130 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 PTPN13Q12923 2485 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 EPG5Q9HCE0 2579 aa4.42□□□□□ -1.7
R3HDM1-202ENST00000409478 TRAV17A0A0B4J275 112 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 TRAV21A0A0B4J279 112 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 CRYGAP11844 174 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 LINC00527Q9UJ94 153 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 IGHV4OR15-8A0A075B7B6 117 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 A0A087WW49 117 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 LY6LH3BQJ8 138 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 GAGE2AQ6NT46 116 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 CFAP54Q96N23 3096 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 TLN1Q9Y490 2541 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 COL27A1Q8IZC6 1860 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 IGHV3-23P01764 117 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 UBE2E1P51965 193 aa4.41□□□□□ -1.7
R3HDM1-202ENST00000409478 ARFGEF3Q5TH69 2177 aa4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 PLXNB1O43157 2135 aa4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 A0A0J9YXY3 114 aa4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 ZNF22P17026 224 aaPredicted RBP4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 COX7A1P24310 79 aa4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 POLR2KP53803 58 aaKnown RBP4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 ADIPOQQ15848 244 aa4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 PLA2G2CQ5R387 149 aa4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 ZFAND3Q9H8U3 227 aa4.4□□□□□ -1.7
R3HDM1-202ENST00000409478 ATOX1O00244 68 aa4.4□□□□□ -1.71
R3HDM1-202ENST00000409478 PF4V1P10720 104 aa4.4□□□□□ -1.71
R3HDM1-202ENST00000409478 LINC00477Q96M19 166 aa4.4□□□□□ -1.71
R3HDM1-202ENST00000409478 FASNP49327 2511 aaKnown RBP4.4□□□□□ -1.71
R3HDM1-202ENST00000409478 SEM1Q6ZVN7 128 aa4.4□□□□□ -1.71
R3HDM1-202ENST00000409478 RPL39P62891 51 aaKnown RBP4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 CDX4O14627 284 aaPredicted RBP4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 NXPH4O95158 308 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 TRACP01848 142 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 TMEM258P61165 79 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 RHOHQ15669 191 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 C5orf38Q86SI9 138 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 IGF2-ASQ6U949 168 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 SDIM1Q6ZPB5 146 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 CLEC2BQ92478 149 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 EDA2RQ9HAV5 297 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 PEMTQ9UBM1 199 aa4.39□□□□□ -1.71
R3HDM1-202ENST00000409478 TRAV8-3A0A0A6YYJ7 113 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 TRBV27A0A0K0K1C4 114 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 NBL1P41271 181 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 NSUN5P1Q3KNT7 163 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 PRR9Q5T870 116 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 C9orf139Q6ZV77 190 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 DCANP1Q8TF63 244 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 DPM3Q9P2X0 92 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 IGHV3OR16-8A0A075B7F1 116 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 A0A1W2PNU3 283 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 I3L3M4 83 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 PRSS2P07478 247 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 MIAQ16674 131 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 C16orf92Q96LL3 132 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 LITAFQ99732 161 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 DYNLRB1Q9NP97 96 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 TRBV6-5A0A0K0K1A5 114 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 TIMM21Q9BVV7 248 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 OVOL1O14753 267 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 PRB3Q04118 309 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 KLK5Q9Y337 293 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 KIF25-AS1Q9Y6Z4 181 aa4.38□□□□□ -1.71
R3HDM1-202ENST00000409478 CLPSL1A2RUU4 121 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 HIST1H4AP62805 103 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 IGFL2Q6UWQ7 119 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 TMEM61Q8N0U2 210 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 ZFAND2AQ8N6M9 145 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 SMCR5Q8TEV8 140 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
R3HDM1-202ENST00000409478 IGHV3-64A0A075B6Q5 118 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms