RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 LENEPQ9Y5L5 61 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 SLC25A20O43772 301 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 CLEC19AQ6UXS0 136 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 SLC25A29Q8N8R3 303 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 SIRPDQ9H106 197 aa11.68□□□□□ -0.54
LIMS2-205ENST00000409455 MAP1AP78559 2803 aaPredicted RBP11.68□□□□□ -0.54
LIMS2-205ENST00000409455 SPRY2O43597 315 aa11.67□□□□□ -0.54
LIMS2-205ENST00000409455 EMP1P54849 157 aa11.67□□□□□ -0.54
LIMS2-205ENST00000409455 Q6ZS46 218 aa11.67□□□□□ -0.54
LIMS2-205ENST00000409455 CITED1Q99966 193 aa11.67□□□□□ -0.54
LIMS2-205ENST00000409455 TRAV21A0A0B4J279 112 aa11.67□□□□□ -0.54
LIMS2-205ENST00000409455 PMVKQ15126 192 aa11.67□□□□□ -0.54
LIMS2-205ENST00000409455 C10orf105Q8TEF2 133 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 PIMREGQ9BSJ6 248 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 TP53TG1Q9Y2A0 90 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 CHD6Q8TD26 2715 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 IGHV4-61A0A0C4DH41 118 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 OOSP1A8MZH6 123 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 C9JAW5 83 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 M0QXV9 152 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 SNCGO76070 127 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 SRD5A1P18405 259 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 EBI3Q14213 229 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 TMEM170BQ5T4T1 132 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
LIMS2-205ENST00000409455 CENPEQ02224 2701 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 ARL3P36405 182 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 FBN2P35556 2912 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 CELSR2Q9HCU4 2923 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 IGF1P05019 195 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 GAGE2BQ13066 116 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 GAGE2EQ4V326 116 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 C9orf139Q6ZV77 190 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 Q8N9W7 124 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 EEF1AKMT3Q96AZ1 226 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.54
LIMS2-205ENST00000409455 IGHV4-30-2A0A087WSY4 118 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 B5MCH6 92 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 TSHBP01222 138 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 TSPEAR-AS2P59090 65 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 RAX2Q96IS3 184 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 IGIPA6NJ69 53 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 RHODO00212 210 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 MED14OSP0DP75 135 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 GPHB5Q86YW7 130 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 LINC00477Q96M19 166 aa11.64□□□□□ -0.55
LIMS2-205ENST00000409455 LGALS3P17931 250 aaKnown RBP11.63□□□□□ -0.55
LIMS2-205ENST00000409455 ZFAND2AQ8N6M9 145 aa11.63□□□□□ -0.55
LIMS2-205ENST00000409455 OR10J6PQ8NGY7 276 aa11.63□□□□□ -0.55
LIMS2-205ENST00000409455 TMEM141Q96I45 108 aa11.63□□□□□ -0.55
LIMS2-205ENST00000409455 AJUBAQ96IF1 538 aa11.63□□□□□ -0.55
LIMS2-205ENST00000409455 ATP6V0E1O15342 81 aa11.63□□□□□ -0.55
LIMS2-205ENST00000409455 ANXA2RQ3ZCQ2 193 aa11.63□□□□□ -0.55
LIMS2-205ENST00000409455 MINOS1Q5TGZ0 78 aa11.63□□□□□ -0.55
LIMS2-205ENST00000409455 MINOS1-NBL1R4GNA1 71 aa11.63□□□□□ -0.55
LIMS2-205ENST00000409455 TRBV7-1A0A0A6YYK4 115 aa11.62□□□□□ -0.55
LIMS2-205ENST00000409455 J3QQQ9 107 aa11.62□□□□□ -0.55
LIMS2-205ENST00000409455 TRPT1Q86TN4 253 aaKnown RBP11.62□□□□□ -0.55
LIMS2-205ENST00000409455 C20orf173Q96LM9 149 aa11.62□□□□□ -0.55
LIMS2-205ENST00000409455 TIMM17AQ99595 171 aa11.62□□□□□ -0.55
LIMS2-205ENST00000409455 U3KQE9 123 aa11.62□□□□□ -0.55
LIMS2-205ENST00000409455 USP9YO00507 2555 aaPredicted RBP11.62□□□□□ -0.55
LIMS2-205ENST00000409455 POLQO75417 2590 aa11.62□□□□□ -0.55
LIMS2-205ENST00000409455 A4D1N5 150 aa11.61□□□□□ -0.55
LIMS2-205ENST00000409455 UBE2E1P51965 193 aa11.61□□□□□ -0.55
LIMS2-205ENST00000409455 NDUFV3P56181 108 aaKnown RBP11.61□□□□□ -0.55
LIMS2-205ENST00000409455 RPL32P62910 135 aaKnown RBP11.61□□□□□ -0.55
LIMS2-205ENST00000409455 KLK9Q2XQG4 91 aa11.61□□□□□ -0.55
LIMS2-205ENST00000409455 KLK9Q9UKQ9 250 aa11.61□□□□□ -0.55
LIMS2-205ENST00000409455 PTPN13Q12923 2485 aa11.61□□□□□ -0.55
LIMS2-205ENST00000409455 NHLRC4P0CG21 123 aaPredicted RBP11.61□□□□□ -0.55
LIMS2-205ENST00000409455 CRIP2P52943 208 aaPredicted RBP11.61□□□□□ -0.55
LIMS2-205ENST00000409455 IGHV3-33P01772 117 aa11.6□□□□□ -0.55
LIMS2-205ENST00000409455 RPL39P62891 51 aaKnown RBP11.6□□□□□ -0.55
LIMS2-205ENST00000409455 TTC32Q5I0X7 151 aa11.6□□□□□ -0.55
LIMS2-205ENST00000409455 H7C2G1 150 aa11.6□□□□□ -0.55
LIMS2-205ENST00000409455 ZNRF2Q8NHG8 242 aa11.6□□□□□ -0.55
LIMS2-205ENST00000409455 AMELXQ99217 191 aa11.6□□□□□ -0.55
LIMS2-205ENST00000409455 ABCA2Q9BZC7 2435 aa11.6□□□□□ -0.55
LIMS2-205ENST00000409455 CELSR1Q9NYQ6 3014 aa11.6□□□□□ -0.55
LIMS2-205ENST00000409455 TRAV4A0A0B4J268 109 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 A0A0B4J2C4 111 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 G3V318 75 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 OVOL1O14753 267 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 P0DMU3 169 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 FAM231AP0DMU4 169 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 FAM231CP0DMU5 169 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 RNASE4P34096 147 aaKnown RBP11.59□□□□□ -0.55
LIMS2-205ENST00000409455 KRTAP10-9P60411 292 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 ATXN8Q156A1 80 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 Q1RN00 199 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 ZNF876PQ49A33 203 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 POM121L12Q8N7R1 296 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 KMT2BQ9UMN6 2715 aaPredicted RBP11.59□□□□□ -0.55
LIMS2-205ENST00000409455 IGHV4OR15-8A0A075B7B6 117 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 A0A087WW49 117 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 GAGE12JA6NER3 117 aa11.59□□□□□ -0.55
LIMS2-205ENST00000409455 VCYO14598 125 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms