RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 C14orf178Q8N769 122 aaPredicted RBP12.26□□□□□ -0.45
PDLIM2-206ENST00000409141 ATP6V0E2Q8NHE4 81 aa12.26□□□□□ -0.45
PDLIM2-206ENST00000409141 GAGE12JA6NER3 117 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 TMEM250H0YL14 139 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 P01737 135 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 OR5AL1P0C617 328 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 SSTP61278 116 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 GAGE1Q13065 139 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 GAGE4Q13068 117 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 GAGE5Q13069 117 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 GAGE13Q4V321 117 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 WFDC10BQ8IUB3 73 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 EIF5A2Q9GZV4 153 aaKnown RBP12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 LY96Q9Y6Y9 160 aa12.25□□□□□ -0.45
PDLIM2-206ENST00000409141 A0A1B0GVY2 172 aa12.24□□□□□ -0.45
PDLIM2-206ENST00000409141 GZMBP10144 247 aa12.24□□□□□ -0.45
PDLIM2-206ENST00000409141 TOR2AQ5JU69 321 aa12.24□□□□□ -0.45
PDLIM2-206ENST00000409141 TPPP3Q9BW30 176 aa12.24□□□□□ -0.45
PDLIM2-206ENST00000409141 TRAV9-2A0A087WT02 112 aa12.23□□□□□ -0.45
PDLIM2-206ENST00000409141 XKRY2A2RUG3 117 aa12.23□□□□□ -0.45
PDLIM2-206ENST00000409141 CEBPGP53567 150 aa12.23□□□□□ -0.45
PDLIM2-206ENST00000409141 OCC1Q8TAD7 63 aa12.23□□□□□ -0.45
PDLIM2-206ENST00000409141 GTSF1LQ9H1H1 148 aa12.23□□□□□ -0.45
PDLIM2-206ENST00000409141 Q9UF83 564 aa12.23□□□□□ -0.45
PDLIM2-206ENST00000409141 FAT2Q9NYQ8 4349 aa12.22□□□□□ -0.45
PDLIM2-206ENST00000409141 TRAV8-6A0A0B4J262 113 aa12.22□□□□□ -0.45
PDLIM2-206ENST00000409141 BTF3P20290 206 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-206ENST00000409141 EVI2AP22794 236 aa12.22□□□□□ -0.45
PDLIM2-206ENST00000409141 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
PDLIM2-206ENST00000409141 NUDT10Q8NFP7 164 aa12.22□□□□□ -0.45
PDLIM2-206ENST00000409141 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
PDLIM2-206ENST00000409141 TNP2Q05952 138 aa12.21□□□□□ -0.45
PDLIM2-206ENST00000409141 OR10J3Q5JRS4 329 aa12.21□□□□□ -0.45
PDLIM2-206ENST00000409141 FAM210AQ96ND0 272 aa12.21□□□□□ -0.45
PDLIM2-206ENST00000409141 HECTD4Q9Y4D8 3996 aa12.21□□□□□ -0.45
PDLIM2-206ENST00000409141 K7EN84 100 aa12.21□□□□□ -0.46
PDLIM2-206ENST00000409141 IGLC6P0CF74 106 aa12.21□□□□□ -0.46
PDLIM2-206ENST00000409141 LINC00315P59091 139 aa12.21□□□□□ -0.46
PDLIM2-206ENST00000409141 TEX261Q6UWH6 196 aa12.21□□□□□ -0.46
PDLIM2-206ENST00000409141 DNAH10OSP0CZ25 163 aa12.2□□□□□ -0.46
PDLIM2-206ENST00000409141 LINC00694P0DN24 101 aa12.2□□□□□ -0.46
PDLIM2-206ENST00000409141 ZNF56Q15929 161 aa12.2□□□□□ -0.46
PDLIM2-206ENST00000409141 LELP1Q5T871 98 aa12.2□□□□□ -0.46
PDLIM2-206ENST00000409141 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
PDLIM2-206ENST00000409141 IGHV3-38A0A0C4DH36 116 aa12.19□□□□□ -0.46
PDLIM2-206ENST00000409141 K7EP13 123 aa12.19□□□□□ -0.46
PDLIM2-206ENST00000409141 RAB4BP61018 213 aa12.19□□□□□ -0.46
PDLIM2-206ENST00000409141 F2Z2F3 143 aa12.18□□□□□ -0.46
PDLIM2-206ENST00000409141 F5H697 171 aa12.18□□□□□ -0.46
PDLIM2-206ENST00000409141 SMIM17P0DL12 118 aa12.18□□□□□ -0.46
PDLIM2-206ENST00000409141 CACNG7P62955 275 aa12.18□□□□□ -0.46
PDLIM2-206ENST00000409141 RPP21Q9H633 154 aaKnown RBP12.18□□□□□ -0.46
PDLIM2-206ENST00000409141 TRBV10-1A0A0K0K1A3 114 aa12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 NDUFS6O75380 124 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 RPL36AP83881 106 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 RPL36ALQ969Q0 106 aaKnown RBP12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 AP1S3Q96PC3 154 aa12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 SMIM7Q9BQ49 75 aa12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 TNFRSF18Q9Y5U5 241 aa12.17□□□□□ -0.46
PDLIM2-206ENST00000409141 SRP19P09132 144 aaKnown RBP12.16□□□□□ -0.46
PDLIM2-206ENST00000409141 C10orf126Q8N4M7 172 aa12.16□□□□□ -0.46
PDLIM2-206ENST00000409141 LINC01556Q5JQF7 62 aa12.15□□□□□ -0.46
PDLIM2-206ENST00000409141 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
PDLIM2-206ENST00000409141 KIF25-AS1Q9Y6Z4 181 aa12.15□□□□□ -0.46
PDLIM2-206ENST00000409141 TRBV7-3A0A075B6L6 115 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 A0A087WWC5 75 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 ZNF727A8MUV8 499 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 GATCO43716 136 aaKnown RBP12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 IGHV3-33P01772 117 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 NTF3P20783 257 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 UBE2D3P61077 147 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 UBE2D2P62837 147 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 Q6ZRN7 208 aaPredicted RBP12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 OR10G8Q8NGN5 311 aa12.14□□□□□ -0.47
PDLIM2-206ENST00000409141 PKD1P98161 4303 aa12.13□□□□□ -0.47
PDLIM2-206ENST00000409141 MGPP08493 103 aa12.13□□□□□ -0.47
PDLIM2-206ENST00000409141 ERVFC1-1P60608 527 aa12.13□□□□□ -0.47
PDLIM2-206ENST00000409141 WDR73Q6P4I2 378 aa12.13□□□□□ -0.47
PDLIM2-206ENST00000409141 FAM231DQ6ZW35 169 aa12.13□□□□□ -0.47
PDLIM2-206ENST00000409141 NEXN-AS1Q8NBZ9 246 aa12.13□□□□□ -0.47
PDLIM2-206ENST00000409141 TRGC1P0CF51 173 aa12.12□□□□□ -0.47
PDLIM2-206ENST00000409141 CTRLP40313 264 aa12.12□□□□□ -0.47
PDLIM2-206ENST00000409141 PEA15Q15121 130 aa12.11□□□□□ -0.47
PDLIM2-206ENST00000409141 TWIST1Q15672 202 aa12.11□□□□□ -0.47
PDLIM2-206ENST00000409141 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
PDLIM2-206ENST00000409141 A8MWL6 223 aa12.1□□□□□ -0.47
PDLIM2-206ENST00000409141 IBA57-AS1B1ANH7 110 aa12.1□□□□□ -0.47
PDLIM2-206ENST00000409141 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-206ENST00000409141 SRSF3P84103 164 aaKnown RBP12.09□□□□□ -0.47
PDLIM2-206ENST00000409141 FAM74A3Q4VXF1 159 aa12.09□□□□□ -0.47
PDLIM2-206ENST00000409141 GTSF1Q8WW33 167 aa12.09□□□□□ -0.47
PDLIM2-206ENST00000409141 DPH3P1Q9H4G8 78 aa12.09□□□□□ -0.47
PDLIM2-206ENST00000409141 C9JQL5 133 aa12.08□□□□□ -0.47
PDLIM2-206ENST00000409141 H7C1H1 209 aa12.08□□□□□ -0.47
PDLIM2-206ENST00000409141 TMEM241Q24JQ0 296 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms