RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 CRYGDP07320 174 aa14.29□□□□□ -0.12
PDGFA-204ENST00000405692 BTF3P20290 206 aaKnown RBP14.29□□□□□ -0.12
PDGFA-204ENST00000405692 NUDT10Q8NFP7 164 aa14.29□□□□□ -0.12
PDGFA-204ENST00000405692 NUDT11Q96G61 164 aa14.29□□□□□ -0.12
PDGFA-204ENST00000405692 LY96Q9Y6Y9 160 aa14.29□□□□□ -0.12
PDGFA-204ENST00000405692 IGLC6P0CF74 106 aa14.28□□□□□ -0.12
PDGFA-204ENST00000405692 CACNG7P62955 275 aa14.28□□□□□ -0.12
PDGFA-204ENST00000405692 Q6ZSN1 163 aa14.28□□□□□ -0.12
PDGFA-204ENST00000405692 C6orf223Q8N319 242 aa14.28□□□□□ -0.12
PDGFA-204ENST00000405692 ATP6V0E2Q8NHE4 81 aa14.28□□□□□ -0.12
PDGFA-204ENST00000405692 SMIM7Q9BQ49 75 aa14.28□□□□□ -0.12
PDGFA-204ENST00000405692 TPPP3Q9BW30 176 aa14.28□□□□□ -0.12
PDGFA-204ENST00000405692 TRAV9-2A0A087WT02 112 aa14.27□□□□□ -0.13
PDGFA-204ENST00000405692 RTL8CO15255 209 aa14.27□□□□□ -0.13
PDGFA-204ENST00000405692 SMIM17P0DL12 118 aa14.27□□□□□ -0.13
PDGFA-204ENST00000405692 RPP21Q9H633 154 aaKnown RBP14.27□□□□□ -0.13
PDGFA-204ENST00000405692 GAGE12JA6NER3 117 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 K7EN84 100 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 K7EP13 123 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 SRP19P09132 144 aaKnown RBP14.26□□□□□ -0.13
PDGFA-204ENST00000405692 GZMBP10144 247 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 RAB4BP61018 213 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 GAGE1Q13065 139 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 GAGE4Q13068 117 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 GAGE5Q13069 117 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 GAGE13Q4V321 117 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 AP1S3Q96PC3 154 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 GTSF1LQ9H1H1 148 aa14.26□□□□□ -0.13
PDGFA-204ENST00000405692 TRAV8-6A0A0B4J262 113 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 MUC21A0A0G2JKD1 596 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 TRBV10-1A0A0K0K1A3 114 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 MUC21A0A140T8X8 626 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 PRSS29PA6NIE9 313 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 ZNF727A8MUV8 499 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 SSTP61278 116 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 PEA15Q15121 130 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 C14orf178Q8N769 122 aaPredicted RBP14.25□□□□□ -0.13
PDGFA-204ENST00000405692 RNASE7Q9H1E1 156 aaKnown RBP14.25□□□□□ -0.13
PDGFA-204ENST00000405692 SMDT1Q9H4I9 107 aa14.25□□□□□ -0.13
PDGFA-204ENST00000405692 EVI2AP22794 236 aa14.24□□□□□ -0.13
PDGFA-204ENST00000405692 ZNF56Q15929 161 aa14.24□□□□□ -0.13
PDGFA-204ENST00000405692 FAM74A3Q4VXF1 159 aa14.24□□□□□ -0.13
PDGFA-204ENST00000405692 FAM231DQ6ZW35 169 aa14.24□□□□□ -0.13
PDGFA-204ENST00000405692 GATCO43716 136 aaKnown RBP14.23□□□□□ -0.13
PDGFA-204ENST00000405692 LELP1Q5T871 98 aa14.23□□□□□ -0.13
PDGFA-204ENST00000405692 WDR73Q6P4I2 378 aa14.23□□□□□ -0.13
PDGFA-204ENST00000405692 TRGC1P0CF51 173 aa14.22□□□□□ -0.13
PDGFA-204ENST00000405692 ERVFC1-1P60608 527 aa14.22□□□□□ -0.13
PDGFA-204ENST00000405692 RAB14P61106 215 aa14.22□□□□□ -0.13
PDGFA-204ENST00000405692 RPL36AP83881 106 aaKnown RBP14.22□□□□□ -0.13
PDGFA-204ENST00000405692 OR10J3Q5JRS4 329 aa14.22□□□□□ -0.13
PDGFA-204ENST00000405692 LYZL1Q6UWQ5 148 aa14.22□□□□□ -0.13
PDGFA-204ENST00000405692 WFDC10BQ8IUB3 73 aa14.22□□□□□ -0.13
PDGFA-204ENST00000405692 RPL36ALQ969Q0 106 aaKnown RBP14.22□□□□□ -0.13
PDGFA-204ENST00000405692 A0A087WWC5 75 aa14.21□□□□□ -0.13
PDGFA-204ENST00000405692 F5H697 171 aa14.21□□□□□ -0.13
PDGFA-204ENST00000405692 DNAH10OSP0CZ25 163 aa14.21□□□□□ -0.13
PDGFA-204ENST00000405692 LINC00694P0DN24 101 aa14.21□□□□□ -0.13
PDGFA-204ENST00000405692 KRTAP1-5Q9BYS1 174 aa14.21□□□□□ -0.13
PDGFA-204ENST00000405692 IGHV3-38A0A0C4DH36 116 aa14.2□□□□□ -0.14
PDGFA-204ENST00000405692 A8MWL6 223 aa14.2□□□□□ -0.14
PDGFA-204ENST00000405692 CTRLP40313 264 aa14.2□□□□□ -0.14
PDGFA-204ENST00000405692 CT83Q5H943 113 aa14.2□□□□□ -0.14
PDGFA-204ENST00000405692 LINC01551Q86U37 167 aa14.2□□□□□ -0.14
PDGFA-204ENST00000405692 C10orf126Q8N4M7 172 aa14.2□□□□□ -0.14
PDGFA-204ENST00000405692 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.2□□□□□ -0.14
PDGFA-204ENST00000405692 TRBV7-3A0A075B6L6 115 aa14.19□□□□□ -0.14
PDGFA-204ENST00000405692 TMEM241Q24JQ0 296 aa14.19□□□□□ -0.14
PDGFA-204ENST00000405692 NTF3P20783 257 aa14.18□□□□□ -0.14
PDGFA-204ENST00000405692 OR10G8Q8NGN5 311 aa14.18□□□□□ -0.14
PDGFA-204ENST00000405692 CNFNQ9BYD5 112 aa14.18□□□□□ -0.14
PDGFA-204ENST00000405692 KIF25-AS1Q9Y6Z4 181 aa14.18□□□□□ -0.14
PDGFA-204ENST00000405692 H7C1H1 209 aa14.17□□□□□ -0.14
PDGFA-204ENST00000405692 NFE4Q86UQ8 179 aa14.17□□□□□ -0.14
PDGFA-204ENST00000405692 C15orf54Q8N8G6 183 aa14.17□□□□□ -0.14
PDGFA-204ENST00000405692 OSTCQ9NRP0 149 aa14.17□□□□□ -0.14
PDGFA-204ENST00000405692 Q9UF83 564 aa14.17□□□□□ -0.14
PDGFA-204ENST00000405692 MGPP08493 103 aa14.16□□□□□ -0.14
PDGFA-204ENST00000405692 LINC00315P59091 139 aa14.16□□□□□ -0.14
PDGFA-204ENST00000405692 TWIST1Q15672 202 aa14.16□□□□□ -0.14
PDGFA-204ENST00000405692 LINC01556Q5JQF7 62 aa14.16□□□□□ -0.14
PDGFA-204ENST00000405692 SMIM15Q7Z3B0 74 aa14.16□□□□□ -0.14
PDGFA-204ENST00000405692 MSRB1Q9NZV6 116 aa14.16□□□□□ -0.14
PDGFA-204ENST00000405692 NAT8Q9UHE5 227 aa14.16□□□□□ -0.14
PDGFA-204ENST00000405692 UBE2D3P61077 147 aa14.15□□□□□ -0.14
PDGFA-204ENST00000405692 UBE2D2P62837 147 aa14.15□□□□□ -0.14
PDGFA-204ENST00000405692 BORCS7Q96B45 105 aa14.15□□□□□ -0.14
PDGFA-204ENST00000405692 DPH3P1Q9H4G8 78 aa14.15□□□□□ -0.14
PDGFA-204ENST00000405692 SRSF3P84103 164 aaKnown RBP14.14□□□□□ -0.15
PDGFA-204ENST00000405692 NEXN-AS1Q8NBZ9 246 aa14.14□□□□□ -0.15
PDGFA-204ENST00000405692 GTSF1Q8WW33 167 aa14.14□□□□□ -0.15
PDGFA-204ENST00000405692 GFRA4Q9GZZ7 299 aa14.14□□□□□ -0.15
PDGFA-204ENST00000405692 DNAH10Q8IVF4 4471 aa14.13□□□□□ -0.15
PDGFA-204ENST00000405692 A0A1B0GVY2 172 aa14.13□□□□□ -0.15
PDGFA-204ENST00000405692 FAM231BA6NCW3 169 aa14.13□□□□□ -0.15
PDGFA-204ENST00000405692 C9JQL5 133 aa14.13□□□□□ -0.15
PDGFA-204ENST00000405692 FOXA3P55318 350 aaPredicted RBP14.13□□□□□ -0.15
PDGFA-204ENST00000405692 TSKUQ8WUA8 353 aa14.13□□□□□ -0.15
PDGFA-204ENST00000405692 DNAJC30Q96LL9 226 aa14.13□□□□□ -0.15
PDGFA-204ENST00000405692 RPL23P62829 140 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms