RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 XKRY2A2RUG3 117 aa13.14□□□□□ -0.31
RTN4-207ENST00000402434 SIVA1O15304 175 aa13.14□□□□□ -0.31
RTN4-207ENST00000402434 SRP19P09132 144 aaKnown RBP13.14□□□□□ -0.31
RTN4-207ENST00000402434 GZMBP10144 247 aa13.14□□□□□ -0.31
RTN4-207ENST00000402434 TTC32Q5I0X7 151 aa13.14□□□□□ -0.31
RTN4-207ENST00000402434 SPANXN1Q5VSR9 72 aa13.14□□□□□ -0.31
RTN4-207ENST00000402434 KRTAP1-5Q9BYS1 174 aa13.14□□□□□ -0.31
RTN4-207ENST00000402434 LY96Q9Y6Y9 160 aa13.14□□□□□ -0.31
RTN4-207ENST00000402434 MUC21A0A0G2JKD1 596 aa13.13□□□□□ -0.31
RTN4-207ENST00000402434 MUC21A0A140T8X8 626 aa13.13□□□□□ -0.31
RTN4-207ENST00000402434 SOHLH1Q5JUK2 328 aa13.13□□□□□ -0.31
RTN4-207ENST00000402434 C14orf178Q8N769 122 aaPredicted RBP13.13□□□□□ -0.31
RTN4-207ENST00000402434 FER1L6-AS1Q8NA97 138 aa13.13□□□□□ -0.31
RTN4-207ENST00000402434 Q9UF83 564 aa13.13□□□□□ -0.31
RTN4-207ENST00000402434 LINC00694P0DN24 101 aa13.12□□□□□ -0.31
RTN4-207ENST00000402434 CEBPGP53567 150 aa13.12□□□□□ -0.31
RTN4-207ENST00000402434 RNASE7Q9H1E1 156 aaKnown RBP13.12□□□□□ -0.31
RTN4-207ENST00000402434 DNAH10Q8IVF4 4471 aa13.12□□□□□ -0.31
RTN4-207ENST00000402434 F2Z2F3 143 aa13.11□□□□□ -0.31
RTN4-207ENST00000402434 C6orf223Q8N319 242 aa13.11□□□□□ -0.31
RTN4-207ENST00000402434 SMIM7Q9BQ49 75 aa13.11□□□□□ -0.31
RTN4-207ENST00000402434 ATP6V0E2Q8NHE4 81 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
RTN4-207ENST00000402434 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 BTF3P20290 206 aaKnown RBP13.1□□□□□ -0.31
RTN4-207ENST00000402434 RAB4BP61018 213 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 GAGE1Q13065 139 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 GAGE4Q13068 117 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 GAGE5Q13069 117 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 GAGE13Q4V321 117 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 FAM231DQ6ZW35 169 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 WFDC10BQ8IUB3 73 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 TPPP3Q9BW30 176 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 GTSF1LQ9H1H1 148 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 KIF25-AS1Q9Y6Z4 181 aa13.1□□□□□ -0.31
RTN4-207ENST00000402434 TRBV10-1A0A0K0K1A3 114 aa13.09□□□□□ -0.31
RTN4-207ENST00000402434 ZNF727A8MUV8 499 aa13.09□□□□□ -0.31
RTN4-207ENST00000402434 SSTP61278 116 aa13.09□□□□□ -0.31
RTN4-207ENST00000402434 CACNG7P62955 275 aa13.09□□□□□ -0.31
RTN4-207ENST00000402434 PRSS29PA6NIE9 313 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 C9JQL5 133 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 K7EP13 123 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 DNAH10OSP0CZ25 163 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 WDR73Q6P4I2 378 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 LYZL1Q6UWQ5 148 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 LINC01551Q86U37 167 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 AP1S3Q96PC3 154 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 SMDT1Q9H4I9 107 aa13.08□□□□□ -0.32
RTN4-207ENST00000402434 CTRLP40313 264 aa13.07□□□□□ -0.32
RTN4-207ENST00000402434 LINC00315P59091 139 aa13.07□□□□□ -0.32
RTN4-207ENST00000402434 SRSF3P84103 164 aaKnown RBP13.07□□□□□ -0.32
RTN4-207ENST00000402434 LELP1Q5T871 98 aa13.07□□□□□ -0.32
RTN4-207ENST00000402434 CNFNQ9BYD5 112 aa13.07□□□□□ -0.32
RTN4-207ENST00000402434 MSRB1Q9NZV6 116 aa13.07□□□□□ -0.32
RTN4-207ENST00000402434 PEA15Q15121 130 aa13.06□□□□□ -0.32
RTN4-207ENST00000402434 FAM74A3Q4VXF1 159 aa13.06□□□□□ -0.32
RTN4-207ENST00000402434 A0A1B0GVY2 172 aa13.05□□□□□ -0.32
RTN4-207ENST00000402434 ZNF56Q15929 161 aa13.05□□□□□ -0.32
RTN4-207ENST00000402434 OR10G8Q8NGN5 311 aa13.05□□□□□ -0.32
RTN4-207ENST00000402434 TRAV9-2A0A087WT02 112 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 TRAV8-6A0A0B4J262 113 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 GATCO43716 136 aaKnown RBP13.04□□□□□ -0.32
RTN4-207ENST00000402434 SMIM17P0DL12 118 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 NTF3P20783 257 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 ERVFC1-1P60608 527 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 CT83Q5H943 113 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 GTSF1Q8WW33 167 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 DNAH2Q9P225 4427 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 TRBV7-3A0A075B6L6 115 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 IGHV3-38A0A0C4DH36 116 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 A8MWL6 223 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 EVI2AP22794 236 aa13.04□□□□□ -0.32
RTN4-207ENST00000402434 RPL36AP83881 106 aaKnown RBP13.04□□□□□ -0.32
RTN4-207ENST00000402434 RPL36ALQ969Q0 106 aaKnown RBP13.04□□□□□ -0.32
RTN4-207ENST00000402434 A0A087WWC5 75 aa13.03□□□□□ -0.32
RTN4-207ENST00000402434 FOXA3P55318 350 aaPredicted RBP13.03□□□□□ -0.32
RTN4-207ENST00000402434 UBE2D3P61077 147 aa13.03□□□□□ -0.32
RTN4-207ENST00000402434 UBE2D2P62837 147 aa13.03□□□□□ -0.32
RTN4-207ENST00000402434 TMEM241Q24JQ0 296 aa13.03□□□□□ -0.32
RTN4-207ENST00000402434 OR10J3Q5JRS4 329 aa13.03□□□□□ -0.32
RTN4-207ENST00000402434 F5H697 171 aa13.02□□□□□ -0.33
RTN4-207ENST00000402434 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
RTN4-207ENST00000402434 LINC01556Q5JQF7 62 aa13.02□□□□□ -0.33
RTN4-207ENST00000402434 NEXN-AS1Q8NBZ9 246 aa13.02□□□□□ -0.33
RTN4-207ENST00000402434 OSTCQ9NRP0 149 aa13.02□□□□□ -0.33
RTN4-207ENST00000402434 HECTD4Q9Y4D8 3996 aa13.02□□□□□ -0.33
RTN4-207ENST00000402434 TNP2Q05952 138 aa13.01□□□□□ -0.33
RTN4-207ENST00000402434 FAT2Q9NYQ8 4349 aa13.01□□□□□ -0.33
RTN4-207ENST00000402434 DNAH17Q9UFH2 4485 aa13.01□□□□□ -0.33
RTN4-207ENST00000402434 RAB14P61106 215 aa13□□□□□ -0.33
RTN4-207ENST00000402434 C10orf126Q8N4M7 172 aa13□□□□□ -0.33
RTN4-207ENST00000402434 BIRC6Q9NR09 4857 aa12.99□□□□□ -0.33
RTN4-207ENST00000402434 M0QY20 66 aa12.99□□□□□ -0.33
RTN4-207ENST00000402434 RPL23P62829 140 aaKnown RBP12.99□□□□□ -0.33
RTN4-207ENST00000402434 TWIST1Q15672 202 aa12.99□□□□□ -0.33
RTN4-207ENST00000402434 Q6ZRN7 208 aaPredicted RBP12.99□□□□□ -0.33
RTN4-207ENST00000402434 ISOC2Q96AB3 205 aa12.99□□□□□ -0.33
RTN4-207ENST00000402434 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
RTN4-207ENST00000402434 DPH3P1Q9H4G8 78 aa12.99□□□□□ -0.33
RTN4-207ENST00000402434 NAT8Q9UHE5 227 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms