RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 OR10AG1Q8NH19 301 aa12.89□□□□□ -0.35
COLCA2-201ENST00000398035 ATP6V0E2Q8NHE4 81 aa12.89□□□□□ -0.35
COLCA2-201ENST00000398035 OCC1Q8TAD7 63 aa12.89□□□□□ -0.35
COLCA2-201ENST00000398035 A0A087WWL8 130 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 Q6ZSN1 163 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 NUDT10Q8NFP7 164 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 NUDT11Q96G61 164 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 GTSF1LQ9H1H1 148 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 LY96Q9Y6Y9 160 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 TRAV8-6A0A0B4J262 113 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 TRBV10-1A0A0K0K1A3 114 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 EVI2AP22794 236 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 RAB4BP61018 213 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 CACNG7P62955 275 aa12.88□□□□□ -0.35
COLCA2-201ENST00000398035 IGLC6P0CF74 106 aa12.87□□□□□ -0.35
COLCA2-201ENST00000398035 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
COLCA2-201ENST00000398035 CEBPGP53567 150 aa12.86□□□□□ -0.35
COLCA2-201ENST00000398035 WDR73Q6P4I2 378 aa12.86□□□□□ -0.35
COLCA2-201ENST00000398035 TPPP3Q9BW30 176 aa12.86□□□□□ -0.35
COLCA2-201ENST00000398035 SMDT1Q9H4I9 107 aa12.86□□□□□ -0.35
COLCA2-201ENST00000398035 A0A087WWC5 75 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 GAGE12JA6NER3 117 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 GAGE1Q13065 139 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 GAGE4Q13068 117 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 GAGE5Q13069 117 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 LELP1Q5T871 98 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 C10orf126Q8N4M7 172 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 AP1S3Q96PC3 154 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 DNAH6Q9C0G6 4158 aa12.85□□□□□ -0.35
COLCA2-201ENST00000398035 DNAH10OSP0CZ25 163 aa12.84□□□□□ -0.35
COLCA2-201ENST00000398035 RPL36AP83881 106 aaKnown RBP12.84□□□□□ -0.35
COLCA2-201ENST00000398035 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
COLCA2-201ENST00000398035 C14orf178Q8N769 122 aaPredicted RBP12.84□□□□□ -0.35
COLCA2-201ENST00000398035 RPL36ALQ969Q0 106 aaKnown RBP12.84□□□□□ -0.35
COLCA2-201ENST00000398035 SMIM7Q9BQ49 75 aa12.84□□□□□ -0.35
COLCA2-201ENST00000398035 RPP21Q9H633 154 aaKnown RBP12.84□□□□□ -0.35
COLCA2-201ENST00000398035 IGHV3-38A0A0C4DH36 116 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 MUC21A0A0G2JKD1 596 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 MUC21A0A140T8X8 626 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 ZNF727A8MUV8 499 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 K7EN84 100 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 SRP19P09132 144 aaKnown RBP12.83□□□□□ -0.36
COLCA2-201ENST00000398035 GZMBP10144 247 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 PEA15Q15121 130 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 FAM74A3Q4VXF1 159 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 OR10J3Q5JRS4 329 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.83□□□□□ -0.36
COLCA2-201ENST00000398035 RNASE7Q9H1E1 156 aaKnown RBP12.83□□□□□ -0.36
COLCA2-201ENST00000398035 NACAE9PAV3 2078 aa12.83□□□□□ -0.36
COLCA2-201ENST00000398035 LINC00694P0DN24 101 aa12.82□□□□□ -0.36
COLCA2-201ENST00000398035 SSTP61278 116 aa12.82□□□□□ -0.36
COLCA2-201ENST00000398035 ZNF56Q15929 161 aa12.82□□□□□ -0.36
COLCA2-201ENST00000398035 NFE4Q86UQ8 179 aa12.82□□□□□ -0.36
COLCA2-201ENST00000398035 WFDC10BQ8IUB3 73 aa12.82□□□□□ -0.36
COLCA2-201ENST00000398035 KRTAP1-5Q9BYS1 174 aa12.82□□□□□ -0.36
COLCA2-201ENST00000398035 TRBV7-3A0A075B6L6 115 aa12.81□□□□□ -0.36
COLCA2-201ENST00000398035 F5H697 171 aa12.81□□□□□ -0.36
COLCA2-201ENST00000398035 TRGC1P0CF51 173 aa12.81□□□□□ -0.36
COLCA2-201ENST00000398035 ERVFC1-1P60608 527 aa12.81□□□□□ -0.36
COLCA2-201ENST00000398035 LYZL1Q6UWQ5 148 aa12.81□□□□□ -0.36
COLCA2-201ENST00000398035 A8MWL6 223 aa12.8□□□□□ -0.36
COLCA2-201ENST00000398035 GATCO43716 136 aaKnown RBP12.8□□□□□ -0.36
COLCA2-201ENST00000398035 OR10G8Q8NGN5 311 aa12.8□□□□□ -0.36
COLCA2-201ENST00000398035 EPPK1P58107 5090 aaKnown RBP12.8□□□□□ -0.36
COLCA2-201ENST00000398035 NTF3P20783 257 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 CT83Q5H943 113 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 LINC01556Q5JQF7 62 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 CNFNQ9BYD5 112 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 KIF25-AS1Q9Y6Z4 181 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 A0A1B0GVY2 172 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 H7C1H1 209 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 ATP6V1G1O75348 118 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 RAB14P61106 215 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 TMEM241Q24JQ0 296 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 LINC01551Q86U37 167 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 Q9UF83 564 aa12.79□□□□□ -0.36
COLCA2-201ENST00000398035 CTRLP40313 264 aa12.78□□□□□ -0.36
COLCA2-201ENST00000398035 FOXA3P55318 350 aaPredicted RBP12.78□□□□□ -0.36
COLCA2-201ENST00000398035 LINC00315P59091 139 aa12.78□□□□□ -0.36
COLCA2-201ENST00000398035 UBE2D3P61077 147 aa12.77□□□□□ -0.37
COLCA2-201ENST00000398035 UBE2D2P62837 147 aa12.77□□□□□ -0.37
COLCA2-201ENST00000398035 TWIST1Q15672 202 aa12.77□□□□□ -0.37
COLCA2-201ENST00000398035 SMIM15Q7Z3B0 74 aa12.77□□□□□ -0.37
COLCA2-201ENST00000398035 OSTCQ9NRP0 149 aa12.77□□□□□ -0.37
COLCA2-201ENST00000398035 MSRB1Q9NZV6 116 aa12.77□□□□□ -0.37
COLCA2-201ENST00000398035 FAM231BA6NCW3 169 aa12.76□□□□□ -0.37
COLCA2-201ENST00000398035 TNP2Q05952 138 aa12.76□□□□□ -0.37
COLCA2-201ENST00000398035 C15orf54Q8N8G6 183 aa12.76□□□□□ -0.37
COLCA2-201ENST00000398035 DPH3P1Q9H4G8 78 aa12.76□□□□□ -0.37
COLCA2-201ENST00000398035 TMEM97Q5BJF2 176 aa12.75□□□□□ -0.37
COLCA2-201ENST00000398035 NEXN-AS1Q8NBZ9 246 aa12.75□□□□□ -0.37
COLCA2-201ENST00000398035 DNAJC30Q96LL9 226 aa12.75□□□□□ -0.37
COLCA2-201ENST00000398035 GFRA4Q9GZZ7 299 aa12.75□□□□□ -0.37
COLCA2-201ENST00000398035 DNAH10Q8IVF4 4471 aa12.75□□□□□ -0.37
COLCA2-201ENST00000398035 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
COLCA2-201ENST00000398035 GTSF1Q8WW33 167 aa12.74□□□□□ -0.37
COLCA2-201ENST00000398035 BORCS7Q96B45 105 aa12.74□□□□□ -0.37
COLCA2-201ENST00000398035 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
COLCA2-201ENST00000398035 NAT8Q9UHE5 227 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms